Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq1813 396 3e-105 >seq1813 Length=181482 Score = 396 bits (438), Expect = 3e-105 Identities = 494/677 (73%), Gaps = 0/677 (0%) Strand=Plus/Plus Query 169991 TCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTT 170050 |||||||||| | || | || ||||||||| | ||||||| || | ||||| Sbjct 72411 TCCACTTCCTATTGGGTGTGGCTTGCTACATGGGCCGTGAGTGGGAGCTTAGCTTCCGTT 72470 Query 170051 TAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTG 170110 | || |||||||||||||| |||||| || |||||||| || |||| || ||| | Sbjct 72471 TGGGCATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCGGTTGCAGCTGCTACCGCAG 72530 Query 170111 TATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCT 170170 | ||||| | || ||| | ||||| || ||||| || || |||||||| || || | Sbjct 72531 TGTTCTTGATCTACCCTATTGGTCAAGGCAGCTTCTCTGATGGTATGCCTCTTGGCATTT 72590 Query 170171 CAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCAT 170230 | || || || ||||| ||| | || |||||||| ||||||||||||||||||||||| | Sbjct 72591 CCGGCACTTTCAACTTTATGATTGTGTTCCAAGCTGAGCACAACATTCTTATGCACCCTT 72650 Query 170231 TCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTT 170290 |||| ||| || || ||||| |||| || || | || || || ||||| |||| Sbjct 72651 TCCACATGCTTGGTGTGGCTGGCGTGTTTGGCGGCTCTCTGTTTAGTGCTATGCATGGTT 72710 Query 170291 CACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGAT 170350 | | || || || ||||| | ||||| || || |||||||| ||| ||| | Sbjct 72711 CCTTGGTTACTTCCAGCTTAATCCGTGAGACTACTGAAAACGAGTCTGCTAACGCTGGTT 72770 Query 170351 ACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTA 170410 |||| || || ||||||| ||||| |||||||| || || || || || ||||||||| Sbjct 72771 ACAAGTTTGGTCAAGAAGGTGAAACTTACAACATCGTGGCTGCTCACGGTTACTTTGGTC 72830 Query 170411 GACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTA 170470 | || || |||||||| |||||||| ||||| |||| | | ||||||||||| ||| Sbjct 72831 GCCTAATTTTCCAATACGCTAGCTTCAACAACTCTCGTTCTTTGCACTTCTTCCTAGCTG 72890 Query 170471 CATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACC 170530 | | ||||||||| |||||||||| ||| | | ||||| |||| ||||| || |||| Sbjct 72891 CTTGGCCTGTAGTAGGCATCTGGTTTACTGCTCTTGGTATCAGCACTATGGCGTTCAACC 72950 Query 170531 TTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACAT 170590 |||| || || ||||||||||| || | || || | || || | || | Sbjct 72951 TTAACGGTTTCAACTTCAACCAATCTGTGGTTGACAGCCAAGGCCGTGTGATCAACACTT 73010 Query 170591 GGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCAC 170650 |||| ||| | | ||| | |||||||| ||||||||||| ||||| |||||||| || | Sbjct 73011 GGGCTGACATCATCAACCGTGCAAACCTTGGTATGGAAGTGATGCACGAGCGTAACGCTC 73070 Query 170651 ACAACTTCCCACTTGAC 170667 |||||||||| |||||| Sbjct 73071 ACAACTTCCCTCTTGAC 73087 Score = 183 bits (202), Expect = 4e-41 Identities = 209/281 (74%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 169696 GATTGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATC 169755 || ||||| || ||||| | |||||| | || | |||||||| ||||| | |||||| Sbjct 44478 GAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATC 44419 Query 169756 CCATGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTG 169815 || ||||| | ||| | || ||||| |||| |||||||| ||||| |||||| Sbjct 44418 CCTACCCTATTGACTGCAACCTCCGTGTTTATTATTGCCTTCATCGCTGCTCCTCCTGTG 44359 Query 169816 GACATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATC 169875 ||||||||||| || | || ||||| | ||||| || |||||||||||||||||||| Sbjct 44358 GACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATC 44299 Query 169876 TCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAA 169935 |||||||| || | || | || || || ||||| |||||||| ||||| ||||| Sbjct 44298 TCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAG 44239 Query 169936 GCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTA 169976 || || | || ||||| ||| | || ||||| || ||||| Sbjct 44238 GCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTTA 44198 Score = 183 bits (202), Expect = 4e-41 Identities = 209/281 (74%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 169696 GATTGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATC 169755 || ||||| || ||||| | |||||| | || | |||||||| ||||| | |||||| Sbjct 134880 GAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATC 134939 Query 169756 CCATGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTG 169815 || ||||| | ||| | || ||||| |||| |||||||| ||||| |||||| Sbjct 134940 CCTACCCTATTGACTGCAACCTCCGTGTTTATTATTGCCTTCATCGCTGCTCCTCCTGTG 134999 Query 169816 GACATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATC 169875 ||||||||||| || | || ||||| | ||||| || |||||||||||||||||||| Sbjct 135000 GACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATC 135059 Query 169876 TCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAA 169935 |||||||| || | || | || || || ||||| |||||||| ||||| ||||| Sbjct 135060 TCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAG 135119 Query 169936 GCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTA 169976 || || | || ||||| ||| | || ||||| || ||||| Sbjct 135120 GCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTTA 135160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582834783921600