Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq1813 304 4e-78 >seq1813 Length=181482 Score = 304 bits (336), Expect = 4e-78 Identities = 421/582 (72%), Gaps = 8/582 (1%) Strand=Plus/Plus Query 26210 GCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATG 26269 || ||| |||||||||||| | || ||| | || ||||| || || |||||| ||| Sbjct 72518 GCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCAAGGCAGCTTCTCTGATGGTATG 72577 Query 26270 CCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATA 26329 |||||||| || || || ||||| ||||||||| | || |||||||| || || || || Sbjct 72578 CCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGTGTTCCAAGCTGAGCACAACATT 72637 Query 26330 CTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCT 26389 || |||||||| ||||| ||| |||||| ||||| || || || || |||| || | Sbjct 72638 CTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGTGTTTGGCGGCTCTCTGTTTAGT 72697 Query 26390 GCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGC-AGAAACGACAGAGGAAGTCTC 26448 |||||||| || |||||||||||| |||| | | || || || || | | || Sbjct 72698 GCTATGCATGGTTCCTTGGTTACTTCC-AGCTTAATCCGTGAGACTACTGAAAACGAGTC 72756 Query 26449 ACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACA 26508 || ||| || |||||||| ||||| | || || || || || || ||||| || Sbjct 72757 TGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAAACTTACAACATCGTGGCTGCTCA 72816 Query 26509 CGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCA 26568 ||| |||||||| | ||||||| || || || || || || ||| |||||| | || Sbjct 72817 CGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGCTTCAACAACTCTCGTTCTTTGCA 72876 Query 26569 TTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCAC 26628 ||||| || ||| ||||||| || || ||||| ||| | || || | |||||| |||| Sbjct 72877 CTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGGTTTACTGCTCTTGGTATCAGCAC 72936 Query 26629 AATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGA-TGTTAATG--G 26685 ||||| || ||||| || ||||| ||||| ||||| || || || || | || | | Sbjct 72937 TATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAATCTGTGGTTGACAGCCAAGGCCG 72996 Query 26686 AAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTAT 26745 ||| | || || |||||||| | | ||||| || ||||| || | ||||| || Sbjct 72997 TGTGATCA-AC--ACTTGGGCTGACATCATCAACCGTGCAAACCTTGGTATGGAAGTGAT 73053 Query 26746 GCACGAGCGTAATGCTCATAACTTTCCACTTGACTTAGCATC 26787 |||||||||||| ||||| ||||| || |||||| |||| || Sbjct 73054 GCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTAGCTTC 73095 Score = 149 bits (164), Expect = 2e-31 Identities = 210/291 (72%), Gaps = 8/291 (3%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || || || |||||||| || ||||| ||||| || || | || ||||| || || || Sbjct 44484 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 44425 Query 25862 ATGAT----ACCCTGCTTACTCGCAGCCACTACATGTTTTATACTTGCCTTCATCGCAGC 25917 ||||| ||||| | ||| ||| || | | ||||| || ||||||||||||| || Sbjct 44424 ATGATCCCTACCCTATTGACT-GCAACCTC--CGTGTTTATTA-TTGCCTTCATCGCTGC 44369 Query 25918 ACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAA 25977 || ||||| || || ||||| || |||||||| ||||| || || || |||| || || Sbjct 44368 TCCTCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAA 44309 Query 25978 CAATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCC 26037 ||| || || || || || | |||| ||||| || || || || || || ||||| Sbjct 44308 CAACATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCC 44249 Query 26038 GATCTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATA 26088 |||||||| |||| | || || || ||||| ||||| ||||| || || Sbjct 44248 TATCTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTTA 44198 Score = 149 bits (164), Expect = 2e-31 Identities = 210/291 (72%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || || || |||||||| || ||||| ||||| || || | || ||||| || || || Sbjct 134874 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 134933 Query 25862 ATGAT----ACCCTGCTTACTCGCAGCCACTACATGTTTTATACTTGCCTTCATCGCAGC 25917 ||||| ||||| | ||| ||| || | | ||||| || ||||||||||||| || Sbjct 134934 ATGATCCCTACCCTATTGACT-GCAACCTC--CGTGTTTATTA-TTGCCTTCATCGCTGC 134989 Query 25918 ACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAA 25977 || ||||| || || ||||| || |||||||| ||||| || || || |||| || || Sbjct 134990 TCCTCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAA 135049 Query 25978 CAATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCC 26037 ||| || || || || || | |||| ||||| || || || || || || ||||| Sbjct 135050 CAACATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCC 135109 Query 26038 GATCTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATA 26088 |||||||| |||| | || || || ||||| ||||| ||||| || || Sbjct 135110 TATCTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTTA 135160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146723239329936