Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq1813 390 3e-104 >seq1813 Length=181482 Score = 390 bits (432), Expect = 3e-104 Identities = 500/689 (73%), Gaps = 0/689 (0%) Strand=Plus/Minus Query 35973 GCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 36032 ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| || | || Sbjct 73092 GCTAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATCACTTCCATACCAAGGTTT 73033 Query 36033 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 36092 |||||||| | |||||||||||||| || || | || | | ||||| || || Sbjct 73032 GCACGGTTGATGATGTCAGCCCAAGTGTTGATCACACGGCCTTGGCTGTCAACCACAGAT 72973 Query 36093 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 36152 || |||||||| || ||||| || || || ||||||||| || || | ||| |||| | Sbjct 72972 TGGTTGAAGTTGAAACCGTTAAGGTTGAACGCCATAGTGCTGATACCAAGAGCAGTAAAC 72913 Query 36153 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAG 36212 || |||| || ||||||||||| |||||||| || ||| || || || ||| Sbjct 72912 CAGATGCCTACTACAGGCCAAGCAGCTAGGAAGAAGTGCAAAGAACGAGAGTTGTTGAAG 72853 Query 36213 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 36272 ||||| || ||||| || || | |||||||| || ||||| || || ||||| || || Sbjct 72852 CTAGCGTATTGGAAAATTAGGCGACCAAAGTAACCGTGAGCAGCCACGATGTTGTAAGTT 72793 Query 36273 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 36332 || ||||||| || || || || ||| ||| ||| || |||| || ||||| Sbjct 72792 TCACCTTCTTGACCAAACTTGTAACCAGCGTTAGCAGACTCGTTTTCAGTAGTCTCACGG 72733 Query 36333 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 36392 || | ||||||||| | || ||||||||| || | || || || || || Sbjct 72732 ATTAAGCTGGAAGTAACCAAGGAACCATGCATAGCACTAAACAGAGAGCCGCCAAACACG 72673 Query 36393 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 36452 || || ||||| ||||| ||||| || |||||||| || ||||| || || || || ||| Sbjct 72672 CCAGCCACACCAAGCATGTGGAAAGGGTGCATAAGAATGTTGTGCTCAGCTTGGAACACA 72613 Query 36453 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 36512 | |||||| |||||||| || ||||| ||||||||||||||||||||||| || ||||| Sbjct 72612 ATCATAAAGTTGAAAGTGCCGGAAATGCCAAGAGGCATACCATCAGAGAAGCTGCCTTGA 72553 Query 36513 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 36572 |||| |||||||| ||||| || || || |||||||| || || || ||||||||| Sbjct 72552 CCAATAGGGTAGATCAAGAACACTGCGGTAGCAGCTGCAACCGGAGCAGAGTAAGCTACA 72493 Query 36573 CATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 36632 ||||| || | ||| || | | | ||||| ||||| | || |||| ||| Sbjct 72492 GCAATCCAAGGACGCATGCCCAAACGGAAGCTAAGCTCCCACTCACGGCCCATGTAGCAA 72433 Query 36633 GAGATACCAATGAGAAAGTGGAACACAAT 36661 | | ||| | || ||||||| ||| || Sbjct 72432 GCCACACCCAATAGGAAGTGGAGCACGAT 72404 Score = 197 bits (218), Expect = 4e-46 Identities = 216/287 (75%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 36669 TATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAG 36728 || || || ||||| || | ||| || || |||| ||||| |||||||| ||||||||| Sbjct 44198 TAAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAG 44257 Query 36729 TGAAGACCGATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAG 36788 |||||||| || || || | |||| || || ||||||||||||||||| ||||| Sbjct 44258 TGAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATAC 44317 Query 36789 AGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACA 36848 || || | || || |||||||||||||||||||| || ||||| ||||| ||||| | Sbjct 44318 AGCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATG 44377 Query 36849 AATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAAC 36908 || ||||| | ||| | | ||| || || || | |||||||||||| || |||||| Sbjct 44378 AAGGCAATAATAAACACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAAC 44437 Query 36909 CACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAA 36955 || || | || |||||||| | || || |||||||| || || || Sbjct 44438 CAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCATTCGCAGAA 44484 Score = 197 bits (218), Expect = 4e-46 Identities = 216/287 (75%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 36669 TATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAG 36728 || || || ||||| || | ||| || || |||| ||||| |||||||| ||||||||| Sbjct 135160 TAAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAG 135101 Query 36729 TGAAGACCGATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAG 36788 |||||||| || || || | |||| || || ||||||||||||||||| ||||| Sbjct 135100 TGAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATAC 135041 Query 36789 AGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACA 36848 || || | || || |||||||||||||||||||| || ||||| ||||| ||||| | Sbjct 135040 AGCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATG 134981 Query 36849 AATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAAC 36908 || ||||| | ||| | | ||| || || || | |||||||||||| || |||||| Sbjct 134980 AAGGCAATAATAAACACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAAC 134921 Query 36909 CACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAA 36955 || || | || |||||||| | || || |||||||| || || || Sbjct 134920 CAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCATTCGCAGAA 134874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150451159024156