Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq1813 399 7e-107 >seq1813 Length=181482 Score = 399 bits (442), Expect = 7e-107 Identities = 484/659 (73%), Gaps = 0/659 (0%) Strand=Plus/Minus Query 25450 GATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAG 25509 || |||| |||||||||||||||||| ||||||||||| ||||| |||||||| || | | Sbjct 73095 GAAGCTAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATCACTTCCATACCAAGG 73036 Query 25510 TCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACT 25569 | |||||||| | |||||||||||||| || || | || | | ||||| || Sbjct 73035 TTTGCACGGTTGATGATGTCAGCCCAAGTGTTGATCACACGGCCTTGGCTGTCAACCACA 72976 Query 25570 GACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTA 25629 || || |||||||| || ||||| || || || ||||||||| || || | ||| ||| Sbjct 72975 GATTGGTTGAAGTTGAAACCGTTAAGGTTGAACGCCATAGTGCTGATACCAAGAGCAGTA 72916 Query 25630 AGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTA 25689 | ||| |||| || ||||||||||| |||||||| || ||| ||| || || Sbjct 72915 AACCAGATGCCTACTACAGGCCAAGCAGCTAGGAAGAAGTGCAAAGAACGAGAGTTGTTG 72856 Query 25690 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 25749 |||||||| || ||||| || || | |||||||| || ||||| || || ||||| || Sbjct 72855 AAGCTAGCGTATTGGAAAATTAGGCGACCAAAGTAACCGTGAGCAGCCACGATGTTGTAA 72796 Query 25750 GTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCA 25809 || || ||||||| || || || || ||| ||| ||| || |||| || ||| Sbjct 72795 GTTTCACCTTCTTGACCAAACTTGTAACCAGCGTTAGCAGACTCGTTTTCAGTAGTCTCA 72736 Query 25810 CGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAAT 25869 || || | ||||||||| | || ||||||||| || | || || || || Sbjct 72735 CGGATTAAGCTGGAAGTAACCAAGGAACCATGCATAGCACTAAACAGAGAGCCGCCAAAC 72676 Query 25870 ACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAG 25929 || || || ||||| ||||| ||||| || |||||||| || ||||| || || || || Sbjct 72675 ACGCCAGCCACACCAAGCATGTGGAAAGGGTGCATAAGAATGTTGTGCTCAGCTTGGAAC 72616 Query 25930 ACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCT 25989 |||| |||||| |||||||| || ||||| ||||||||||||||||||||||| || ||| Sbjct 72615 ACAATCATAAAGTTGAAAGTGCCGGAAATGCCAAGAGGCATACCATCAGAGAAGCTGCCT 72556 Query 25990 TGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCT 26049 || |||| |||||||| ||||| || || || |||||||| || || || |||||| Sbjct 72555 TGACCAATAGGGTAGATCAAGAACACTGCGGTAGCAGCTGCAACCGGAGCAGAGTAAGCT 72496 Query 26050 ACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTA 26108 ||| ||||| || | |||||| | | | ||||| ||||| | || |||| ||| Sbjct 72495 ACAGCAATCCAAGGACGCATGCCCAAACGGAAGCTAAGCTCCCACTCACGGCCCATGTA 72437 Score = 197 bits (218), Expect = 4e-46 Identities = 216/287 (75%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 26149 TATGGTCCACCGTTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAG 26208 || || || ||||| || | ||| || || |||| ||||| |||||||| ||||||||| Sbjct 44198 TAAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAG 44257 Query 26209 TGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAG 26268 |||||||| || || ||| | |||| || || || |||||||||||||| ||||| Sbjct 44258 TGAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATAC 44317 Query 26269 AGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACA 26328 || || | || || |||||||||||||||||||| || ||||| ||||| ||||| | Sbjct 44318 AGCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATG 44377 Query 26329 AATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAAC 26388 || ||||| | ||| | | ||| || || || | |||||||||||| || |||||| Sbjct 44378 AAGGCAATAATAAACACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAAC 44437 Query 26389 CACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAA 26435 || || | || |||||||| | || || |||||||| || || || Sbjct 44438 CAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCATTCGCAGAA 44484 Score = 197 bits (218), Expect = 4e-46 Identities = 216/287 (75%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 26149 TATGGTCCACCGTTATACAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAG 26208 || || || ||||| || | ||| || || |||| ||||| |||||||| ||||||||| Sbjct 135160 TAAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAG 135101 Query 26209 TGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAG 26268 |||||||| || || ||| | |||| || || || |||||||||||||| ||||| Sbjct 135100 TGAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATAC 135041 Query 26269 AGTAATGCTCCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACA 26328 || || | || || |||||||||||||||||||| || ||||| ||||| ||||| | Sbjct 135040 AGCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATG 134981 Query 26329 AATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAAC 26388 || ||||| | ||| | | ||| || || || | |||||||||||| || |||||| Sbjct 134980 AAGGCAATAATAAACACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAAC 134921 Query 26389 CACCCCACATAGAGGCGGTTGTTTGTACTTGTAACCCAGTCACATAA 26435 || || | || |||||||| | || || |||||||| || || || Sbjct 134920 CAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCATTCGCAGAA 134874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151990325867864