Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq1813 495 4e-135 >seq1813 Length=181482 Score = 495 bits (548), Expect = 4e-135 Identities = 504/654 (77%), Gaps = 6/654 (1%) Strand=Plus/Plus Query 162832 GGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGTGTTGCATAC 162891 || ||| ||||||| ||| | ||| || || |||||||||||||| ||| || ||| Sbjct 72443 GGCCGTGAGTGGGAGCTTAGCTTCCGTTTGGGCATGCGTCCTTGGATTGCTGTAGCTTAC 72502 Query 162892 TCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGTCAAGGTTCT 162951 ||||| || || | || || ||| ||||||||| |||| ||| | |||||||| Sbjct 72503 TCTGCTCCGGTTGCAGCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCAAGGCAGC 72562 Query 162952 TTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTCGTGTTCCAA 163011 |||||||| | ||||||||||| ||||| || ||||| |||| ||| | ||||||||| Sbjct 72563 TTCTCTGATGGTATGCCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGTGTTCCAA 72622 Query 163012 GCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGTGTATTCGGT 163071 || ||||||||||| || |||||||| ||||| ||| |||| || || || || || || Sbjct 72623 GCTGAGCACAACATTCTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGTGTTTGGC 72682 Query 163072 GGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACT 163131 || || || |||||||||||||| ||||| | |||||||| | ||| | || ||| Sbjct 72683 GGCTCTCTGTTTAGTGCTATGCATGGTTCCTTGGTTACTTCCAGCTTAATCCGTGAGACT 72742 Query 163132 ACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAAC 163191 ||||| | ||||| ||| ||||| ||||| || ||||||| || ||||||||| Sbjct 72743 ACTGAAAACGAGTCTGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAAACTTACAAC 72802 Query 163192 ATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAAC 163251 || || |||||||| || |||||||||||| | || ||||| || || ||||||||| Sbjct 72803 ATCGTGGCTGCTCACGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGCTTCAACAAC 72862 Query 163252 TCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCA 163311 || ||||| | ||||||||||| ||||| | ||||| || |||||||||| ||||| Sbjct 72863 TCTCGTTCTTTGCACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGGTTTACTGCT 72922 Query 163312 ATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTT 163371 | ||| | |||||||| |||||||||||||||||||||||||||||||| || ||| Sbjct 72923 CTTGGTATCAGCACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAATCTGTGGTT 72982 Query 163372 GAC-GC--AGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTT 163428 ||| || ||| || ||||| |||||||| || ||| | ||| | ||| ||| Sbjct 72983 GACAGCCAAGGCCGT---GTGATCAACACTTGGGCTGACATCATCAACCGTGCAAACCTT 73039 Query 163429 GGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCT 163482 ||||||||||| |||||||||||||| |||||||||||||| |||||||| ||| Sbjct 73040 GGTATGGAAGTGATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTAGCT 73093 Score = 172 bits (190), Expect = 6e-38 Identities = 196/263 (75%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 162522 TGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGC 162581 ||| || ||| | || |||||||||| ||||| | ||||||||| | | | | || Sbjct 44461 TGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATCCCTACCCTATTGACTGC 44402 Query 162582 AGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAG 162641 | | | || || ||||| ||||| || || ||||| || || ||||||||||| | Sbjct 44401 AACCTCCGTGTTTATTATTGCCTTCATCGCTGCTCCTCCTGTGGACATCGATGGTATTCG 44342 Query 162642 AGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCC 162701 || |||||| | ||||| | || ||||||||||||||||||||||||||| | | || Sbjct 44341 TGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATCTCTGGTGCTATTATCCC 44282 Query 162702 TAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGA 162761 || || ||| ||||||||||||||||| ||||||||||| || || | |||||||| Sbjct 44281 TACCTCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAGGCTGCTTCCCTTGATGA 44222 Query 162762 GTGGTTGTATAATGGTGGACCTT 162784 ||| | || || || || |||| Sbjct 44221 ATGGCTTTACAACGGCGGCCCTT 44199 Score = 172 bits (190), Expect = 6e-38 Identities = 196/263 (75%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 162522 TGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGC 162581 ||| || ||| | || |||||||||| ||||| | ||||||||| | | | | || Sbjct 134897 TGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATCCCTACCCTATTGACTGC 134956 Query 162582 AGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAG 162641 | | | || || ||||| ||||| || || ||||| || || ||||||||||| | Sbjct 134957 AACCTCCGTGTTTATTATTGCCTTCATCGCTGCTCCTCCTGTGGACATCGATGGTATTCG 135016 Query 162642 AGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCC 162701 || |||||| | ||||| | || ||||||||||||||||||||||||||| | | || Sbjct 135017 TGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATCTCTGGTGCTATTATCCC 135076 Query 162702 TAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGA 162761 || || ||| ||||||||||||||||| ||||||||||| || || | |||||||| Sbjct 135077 TACCTCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAGGCTGCTTCCCTTGATGA 135136 Query 162762 GTGGTTGTATAATGGTGGACCTT 162784 ||| | || || || || |||| Sbjct 135137 ATGGCTTTACAACGGCGGCCCTT 135159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553072258802160