Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq1813 619 1e-172 seq810 82.4 8e-11 >seq1813 Length=181482 Score = 619 bits (686), Expect = 1e-172 Identities = 553/689 (80%), Gaps = 4/689 (1%) Strand=Plus/Plus Query 161173 GTGTTCCACTTCCTGATTGGCAT--CTATGCTTACATGGGTCGTGAGTGGGAACTTTCTT 161230 ||| |||||||||| | || | || |||| ||||||| ||||||||||| ||| | Sbjct 72407 GTGCTCCACTTCCTATTGGGTGTGGCT-TGCT-ACATGGGCCGTGAGTGGGAGCTTAGCT 72464 Query 161231 ACCGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGA 161290 |||| |||| ||||||||||||||| ||||| ||||||||||| || || || || | Sbjct 72465 TCCGTTTGGGCATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCGGTTGCAGCTGCTA 72524 Query 161291 GTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGG 161350 ||||||||| || |||| ||| | |||||||| |||||||||| |||||||| | Sbjct 72525 CCGCAGTGTTCTTGATCTACCCTATTGGTCAAGGCAGCTTCTCTGATGGTATGCCTCTTG 72584 Query 161351 GCATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGC 161410 |||| || || || ||||||| ||| |||| |||||||| |||||||||||||| |||| Sbjct 72585 GCATTTCCGGCACTTTCAACTTTATGATTGTGTTCCAAGCTGAGCACAACATTCTTATGC 72644 Query 161411 ACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGC 161470 |||| ||||| ||||| || || || || ||||||||||| |||||||| ||||| |||| Sbjct 72645 ACCCTTTCCACATGCTTGGTGTGGCTGGCGTGTTTGGCGGCTCTCTGTTTAGTGCTATGC 72704 Query 161471 ACGGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACT 161530 | ||||| ||||||| || | | ||||| || || ||||||||||| ||| Sbjct 72705 ATGGTTCCTTGGTTACTTCCAGCTTAATCCGTGAGACTACTGAAAACGAGTCTGCTAACG 72764 Query 161531 ATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACT 161590 |||||||||||| |||||||||| || || ||||||||||| ||||| ||||| |||| Sbjct 72765 CTGGTTACAAGTTTGGTCAAGAAGGTGAAACTTACAACATCGTGGCTGCTCACGGTTACT 72824 Query 161591 TCGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCC 161650 | ||||| || ||||||||||||||| |||||||||||| || || |||||||||||| Sbjct 72825 TTGGTCGCCTAATTTTCCAATACGCTAGCTTCAACAACTCTCGTTCTTTGCACTTCTTCC 72884 Query 161651 TTGCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCAT 161710 | |||||||||||||| || ||||||||||| ||||| || || | ||||| ||||| | Sbjct 72885 TAGCTGCTTGGCCTGTAGTAGGCATCTGGTTTACTGCTCTTGGTATCAGCACTATGGCGT 72944 Query 161711 TCAACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCA 161770 ||||||| || ||||||||||||||||| ||| | ||||| || || || || |||| Sbjct 72945 TCAACCTTAACGGTTTCAACTTCAACCAATCTGTGGTTGACAGCCAAGGCCGTGTGATCA 73004 Query 161771 ACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCA 161830 |||| ||||| ||| | |||||||||| ||||| |||||||||||||||||||| | Sbjct 73005 ACACTTGGGCTGACATCATCAACCGTGCAAACCTTGGTATGGAAGTGATGCACGAGCGTA 73064 Query 161831 ATGCTCACAACTTCCCTCTTGACCTTGCT 161859 | ||||||||||||||||||||||| ||| Sbjct 73065 ACGCTCACAACTTCCCTCTTGACCTAGCT 73093 Score = 590 bits (654), Expect = 7e-164 Identities = 736/1003 (73%), Gaps = 4/1003 (0%) Strand=Plus/Plus Query 162129 GACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 162188 || ||||||||| | || | || || |||||||| ||||| || | ||| | || Sbjct 117406 GATGACTGGCTTCGTCGTGATAGGTTTGTATTTGTTGGTTGGTCAGGTTTACTTTTGTTC 117465 Query 162189 CCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGG 162248 || |||||| |||||||||| ||||||||||| || || ||||| || || ||| Sbjct 117466 CCTTGTGCTTACTTTGCTCTTGGCGGTTGGCTTACCGGAACAACTTTTGTAACATCATGG 117525 Query 162249 TATACTCACGGACTTGCGAGTTCCTATCTTGAGGG-TGCAAACTTTCTTACTGCGGCAGT 162307 |||||||| || | || || || || |||||||| ||| |||||| | ||||| || || Sbjct 117526 TATACTCATGGGTTGGCAAGCTCTTACCTTGAGGGCTGC-AACTTTTTGACTGCTGCCGT 117584 Query 162308 TTCTACTCCAGCAGAC-GCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTC 162366 || || ||||| || ||| ||| |||||||||| | || ||||| || || ||| Sbjct 117585 GTCAACCCCAGCTAACAGCT-TGGCTCATTCTCTTTTACTATGGTGGGGGCCGGAAGCTC 117643 Query 162367 AAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACG 162426 |||| || || | || ||||| ||||| || || || ||||||||||| || | || | Sbjct 117644 AAGGAGATTTTACTCGTTGGTGTCAACTAGGTGGTCTTTGGACTTTTGTAGCTTTGCATG 117703 Query 162427 GAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGACTTATCGGTA 162486 | || |||| | || || |||||||||||||| |||||| |||| || | || Sbjct 117704 GTGCTTTTGGCTTGATTGGATTCATGCTTCGCCAATTTGAATTGGCTCGCTCTGTCCAAT 117763 Query 162487 TTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTC 162546 | || ||||| || || |||||||| || || |||||| | || || || ||| || Sbjct 117764 TACGACCTTATAACGCCATTGCTTTTTCTGGACCTATTTCAGTTTTTGTATCTGTGTTCT 117823 Query 162547 TTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAA 162606 | || |||||| | || ||||| |||||||| || || || || || ||||||| Sbjct 117824 TAATTTATCCTCTTGGTCAATCAGGTTGGTTCTTTGCTCCAAGTTTTGGAGTTGCAGCAA 117883 Query 162607 TCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCTTTTCACA 162666 ||||||| ||| | | || ||||||| || ||||||||||| || || ||||| || | Sbjct 117884 TCTTCCGTTTCATTTTGTTTTTCCAAGGTTTTCATAACTGGACACTTAACCCTTTCCATA 117943 Query 162667 TGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGAGTGACAG 162726 ||||||| || || ||| | | || | ||| | |||| ||| |||||||| | || | Sbjct 117944 TGATGGGTGTGGCTGGTGTTTTAGGAGCTGCTCTTCTCTGTGCAATTCATGGCGCAACTG 118003 Query 162727 TTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGCATTTGACTCCA 162786 | ||||| || ||| |||||||| || || |||||||| || ||| || | | Sbjct 118004 TGGAAAACACTTTGTTTGAAGATGGAGATGGTGCGAACACTTTCCGTGCCTTTAACCCTA 118063 Query 162787 CACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTCACAGATTTTCG 162846 ||||| |||||||| ||||| ||||||||||| ||||| |||||||| ||||| || | Sbjct 118064 CACAGTCCGAAGAAACATATTCCATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTG 118123 Query 162847 GTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGTTCCCGTCATGG 162906 ||||||||||| ||||| || ||| | |||||||||||||| |||||||| || | || Sbjct 118124 GTATTGCTTTTTCGAACAAACGATGGCTTCATTTCTTTATGCTTTTTGTTCCTGTAACGG 118183 Query 162907 GTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCGTGCTTACGACT 162966 | || |||| || | || ||| | | || || |||||||||||| | || || || | Sbjct 118184 GGCTTTGGATGAGCGCAATTGGTGTAGTAGGTCTTGCTCTCAATCTTAGAGCATATGATT 118243 Query 162967 TTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTTCTATACAAAGA 163026 ||||||||||||| |||| || |||||||| ||||| ||||| || || || ||||| | Sbjct 118244 TTGTATCTCAAGAGATTCGAGCTGCAGAAGATCCTGAATTTGAAACTTTTTACACAAAAA 118303 Query 163027 ACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCAACCTCATGAGA 163086 |||||||| | ||||| || | ||||| ||| | || | || || |||||||| | Sbjct 118304 ACATTCTTTTAAATGAGGGTATCCGAGCCTGGATGGCCGCTCAAGATCAGCCTCATGAAA 118363 Query 163087 ACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 | |||| |||||||| |||||| | ||| | || |||||||| Sbjct 118364 ATCTTGTATTCCCTGAGGAGGTCCTACCACGTGGAAACGCTCT 118406 Score = 215 bits (238), Expect = 6e-51 Identities = 216/278 (78%), Gaps = 2/278 (1%) Strand=Plus/Minus Query 160885 TGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTGATGATTCCC 160944 ||||| |||||||| || ||||||||||| | |||||||| || || || ||||| || Sbjct 44475 TGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATCCCT 44416 Query 160945 TGCTTGCTCGCTGCTACCATT-TGTTTCATCATTGCCTTCGTTGGTGCTCCCCCTGTGGA 161003 | | | |||| ||| ||||| || ||||||||| | | |||||| |||||||| Sbjct 44415 ACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCCTCCTGTGGA 44357 Query 161004 CATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAACATCATCTC 161063 |||||| || |||||||| || || ||||||| | ||||||| |||||||||||||| Sbjct 44356 CATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATCTC 44297 Query 161064 TGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATCTGGGAAGC 161123 ||||||| |||||||| | ||| || || ||||| ||||||||||| |||||||| || Sbjct 44296 TGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAGGC 44237 Query 161124 AGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTT 161161 || || || |||||||| |||||||| || |||| Sbjct 44236 TGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 44199 Score = 215 bits (238), Expect = 6e-51 Identities = 216/278 (78%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 160885 TGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTGATGATTCCC 160944 ||||| |||||||| || ||||||||||| | |||||||| || || || ||||| || Sbjct 134883 TGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATCCCT 134942 Query 160945 TGCTTGCTCGCTGCTACCATT-TGTTTCATCATTGCCTTCGTTGGTGCTCCCCCTGTGGA 161003 | | | |||| ||| ||||| || ||||||||| | | |||||| |||||||| Sbjct 134943 ACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCCTCCTGTGGA 135001 Query 161004 CATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAACATCATCTC 161063 |||||| || |||||||| || || ||||||| | ||||||| |||||||||||||| Sbjct 135002 CATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATCTC 135061 Query 161064 TGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATCTGGGAAGC 161123 ||||||| |||||||| | ||| || || ||||| ||||||||||| |||||||| || Sbjct 135062 TGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAGGC 135121 Query 161124 AGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTT 161161 || || || |||||||| |||||||| || |||| Sbjct 135122 TGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 135159 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| ||||||||||| |||||||||| ||| |||||| ||| | ||||||||||||||| Sbjct 96975 GGGCTGTAGCGCAGCCTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCGCAGGTTCGAAT 96916 Query 157751 CCTGTCACCCC 157761 ||||||| ||| Sbjct 96915 CCTGTCAGCCC 96905 >seq810 Length=18296 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 158332 GACGACCAGTACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGC 158391 || ||| | |||||||| || || |||||| | || | || || ||||| ||| Sbjct 5153 GAGGACGAATACATCCTGGATGCTGCTGAGAACGCCAACATTGACCTGCCCTACTCCTGC 5094 Query 158392 CGTGCAGGCGCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGC 158451 || || ||||| || ||| |||||||| | |||| ||||| || ||||| ||| Sbjct 5093 CGCGCGGGCGCGTGCTCGAGCTGTGCGGGCATGATCGTGGAGGGCACAGTGGACCAGAGC 5034 Query 158452 GACCAGTCCTTCCTGGACGA 158471 |||||||||||||||||||| Sbjct 5033 GACCAGTCCTTCCTGGACGA 5014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547734779832240