Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq1813 619 2e-172 >seq1813 Length=181482 Score = 619 bits (686), Expect = 2e-172 Identities = 740/1002 (74%), Gaps = 2/1002 (0%) Strand=Plus/Minus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | ||| | ||||| ||||| ||||||| |||||||| || ||||| Sbjct 118406 AGAGCGTTTCCACGTGGTAGGACCTCCTCAGGGAATACAAGATTTTCATGAGGCTGATCT 118347 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | |||| ||| || || | ||| ||||| || || ||||| |||||||| || || Sbjct 118346 TGAGCGGCCATCCAGGCTCGGATACCCTCATTTAAAAGAATGTTTTTTGTGTAAAAAGTT 118287 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || || || ||||||||||| |||| |||||||| |||||||| ||||| || | ||| Sbjct 118286 TCAAATTCAGGATCTTCTGCAGCTCGAATCTCTTGAGATACAAAATCATATGCTCTAAGA 118227 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 |||||||||||||| | | ||| || | || |||| || ||| | ||||||||||| Sbjct 118226 TTGAGAGCAAGACCTACTACACCAATTGCGCTCATCCAAAGCCCCGTTACAGGAACAAAA 118167 Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009 |||||||||||||| | ||| | || || ||| |||||||||||||| ||||||||| Sbjct 118166 AGCATAAAGAAATGAAGCCATCGTTTGTTCGAAAAAGCAATACCAAAGATCTGAGACCAG 118107 Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069 ||||||||||| |||||||| ||||| || ||||| ||||| | | || || | Sbjct 118106 AAACGGTTTGCAGTAACCATGGAATATGTTTCTTCGGACTGTGTAGGGTTAAAGGCACGG 118047 Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129 |||||||| || ||| ||||||||| ||| |||||| |||||||| | || || ||| Sbjct 118046 AAAGTGTTCGCACCATCTCCATCTTCAAACAAAGTGTTTTCCACAGTTGCGCCATGAATT 117987 Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189 || | || || || |||| | | ||| || ||||||||||||||||| ||||| || Sbjct 117986 GCACAGAGAAGAGCAGCTCCTAAAACACCAGCCACACCCATCATATGGAAAGGGTTAAGT 117927 Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249 ||||||||||| || || || | || | | ||| | || || |||||||| ||||| Sbjct 117926 GTCCAGTTATGAAAACCTTGGAAAAACAAAATGAAACGGAAGATTGCTGCAACTCCAAAA 117867 Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309 || ||||||||||||| || || || |||||||| || | |||||| |||||| Sbjct 117866 CTTGGAGCAAAGAACCAACCTGATTGACCAAGAGGATAAATTAAGAACACAGATACAAAA 117807 Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369 || | ||||| ||||| || ||||| || || || || || | | | | | |||| Sbjct 117806 ACTGAAATAGGTCCAGAAAAAGCAATGGCGTTATAAGGTCGTAATTGGACAGAGCGAGCC 117747 Query 102370 AACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAA 102429 || || ||||| ||||||||||| ||||| | | |||| ||||| || | ||| |||||| Sbjct 117746 AATTCAAATTGGCGAAGCATGAATCCAATCAAGCCAAAAGCACCATGCAAAGCTACAAAA 117687 Query 102430 GCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAA 102489 | ||| || || || ||||| ||| | ||||||||||||||||| || ||||| Sbjct 117686 GTCCAAAGACCACCTAGTTGACACCAACGAGTAAAATCTCCTTGAGCTTCCGGCCCCCAC 117627 Query 102490 AGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAA 102549 ||| | |||||||||| ||| || ||| || |||||||| ||||| || | ||| Sbjct 117626 CATAGTAAAAGAGAATGAGCCAAGCTGTTAGCTGGGGTTGACACGGCAGCAGTCA-AAAA 117568 Query 102550 TTAGCA-CCTTCAAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAACGT 102608 | ||| || ||||||||| || | ||| || |||||||| || || |||| || Sbjct 117567 GTTGCAGCCCTCAAGGTAAGAGCTTGCCAACCCATGAGTATACCATGATGTTACAAAAGT 117508 Query 102609 CGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCAGA 102668 || || |||||||| || |||| || | |||||| || || | ||||| || || Sbjct 117507 TGTTCCGGTAAGCCAACCGCCAAGAGCAAAGTAAGCACAAGGGAACAAAAGTAAACCTGA 117448 Query 102669 CCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATC 102710 |||||| ||||| ||||| | ||| || || ||||||||| Sbjct 117447 CCAACCAACAAATACAAACCTATCACGACGAAGCCAGTCATC 117406 Score = 477 bits (528), Expect = 1e-129 Identities = 499/665 (75%), Gaps = 0/665 (0%) Strand=Plus/Minus Query 103166 TCTGCAGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATA 103225 ||| | | ||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 73101 TCTACGGAAGCTAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATCACTTCCATA 73042 Query 103226 CCCAGACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCA 103285 || || || ||||||| | ||| ||||| ||||| | |||||| || || | ||| Sbjct 73041 CCAAGGTTTGCACGGTTGATGATGTCAGCCCAAGTGTTGATCACACGGCCTTGGCTGTCA 72982 Query 103286 AGGATGGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGT 103345 | | || |||||||||||||| ||||| |||||||||||||| ||||| | |||||| Sbjct 72981 ACCACAGATTGGTTGAAGTTGAAACCGTTAAGGTTGAACGCCATAGTGCTGATACCAAGA 72922 Query 103346 GCGGTGAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAG 103405 || || |||||||| || ||||| || | ||| Sbjct 72921 GCAGTAAACCAGATGCCTACTACAGGCCAAGCAGCTAGGAAGAAGTGCAAAGAACGAGAG 72862 Query 103406 TTGTTGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATG 103465 |||||||| ||||||||||| || | ||||| |||||||| ||||| || |||||| Sbjct 72861 TTGTTGAAGCTAGCGTATTGGAAAATTAGGCGACCAAAGTAACCGTGAGCAGCCACGATG 72802 Query 103466 TTGTATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTC 103525 ||||| || || | ||||| || |||||||||||| ||| ||| || ||||||| Sbjct 72801 TTGTAAGTTTCACCTTCTTGACCAAACTTGTAACCAGCGTTAGCAGACTCGTTTTCAGTA 72742 Query 103526 GTCTCACGAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCA 103585 |||||||| | | ||| ||||| | ||||| ||||||||||| ||||| || || Sbjct 72741 GTCTCACGGATTAAGCTGGAAGTAACCAAGGAACCATGCATAGCACTAAACAGAGAGCCG 72682 Query 103586 CCGAAGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCT 103645 || || || ||||| || || ||||||||||| |||||||| |||||||| || || ||| Sbjct 72681 CCAAACACGCCAGCCACACCAAGCATGTGGAAAGGGTGCATAAGAATGTTGTGCTCAGCT 72622 Query 103646 TGGAAGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAAC 103705 ||||| || | ||| ||||||| || || ||||| || | ||||||| |||| ||||| Sbjct 72621 TGGAACACAATCATAAAGTTGAAAGTGCCGGAAATGCCAAGAGGCATACCATCAGAGAAG 72562 Query 103706 GAACCTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAG 103765 |||||||||| ||||||| |||||| ||||||| ||||| ||||| ||||||||| Sbjct 72561 CTGCCTTGACCAATAGGGTAGATCAAGAACACTGCGGTAGCAGCTGCAACCGGAGCAGAG 72502 Query 103766 TATGCGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCC 103825 || || ||| ||||| || |||||||||| |||| || | ||||||||||| ||| Sbjct 72501 TAAGCTACAGCAATCCAAGGACGCATGCCCAAACGGAAGCTAAGCTCCCACTCACGGCCC 72442 Query 103826 ATATA 103830 || || Sbjct 72441 ATGTA 72437 Score = 197 bits (218), Expect = 2e-45 Identities = 216/287 (75%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 103872 AAGGACCACCGTTATACAGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGT 103931 |||| || ||||| || ||||| |||||||| || || || ||||| || || ||||||| Sbjct 44199 AAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAGT 44258 Query 103932 GAAGACCAATTGCGTTGGAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACA 103991 |||||||||| || |||| || | || ||||||||||||||||||||||| |||| Sbjct 44259 GAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATACA 44318 Query 103992 TGAGTGAACCAGCGACGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGA 104051 | ||||||| || || |||||||| || ||||| || || ||||| || || | || Sbjct 44319 GCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATGA 44378 Query 104052 AAGCAACGATGAAGCAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACC 104111 | |||| || || | |||||| | ||| || || |||||||| || ||||| |||| Sbjct 44379 AGGCAATAATAAACACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAACC 44438 Query 104112 AACCAACATAGAGACGGTTGTTTGTCGATGTAACCCACTCGCAGAAG 104158 |||| | || || ||||| | || |||||||| ||||||||| Sbjct 44439 AACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCATTCGCAGAAG 44485 Score = 197 bits (218), Expect = 2e-45 Identities = 216/287 (75%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 103872 AAGGACCACCGTTATACAGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGT 103931 |||| || ||||| || ||||| |||||||| || || || ||||| || || ||||||| Sbjct 135159 AAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAGT 135100 Query 103932 GAAGACCAATTGCGTTGGAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACA 103991 |||||||||| || |||| || | || ||||||||||||||||||||||| |||| Sbjct 135099 GAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATACA 135040 Query 103992 TGAGTGAACCAGCGACGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGA 104051 | ||||||| || || |||||||| || ||||| || || ||||| || || | || Sbjct 135039 GCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATGA 134980 Query 104052 AAGCAACGATGAAGCAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACC 104111 | |||| || || | |||||| | ||| || || |||||||| || ||||| |||| Sbjct 134979 AGGCAATAATAAACACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAACC 134920 Query 104112 AACCAACATAGAGACGGTTGTTTGTCGATGTAACCCACTCGCAGAAG 104158 |||| | || || ||||| | || |||||||| ||||||||| Sbjct 134919 AACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCATTCGCAGAAG 134873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633499235079120