Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq1813 504 2e-138 >seq1813 Length=181482 Score = 504 bits (558), Expect = 2e-138 Identities = 533/695 (77%), Gaps = 8/695 (1%) Strand=Plus/Minus Query 21462 TCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAG 21521 || ||||| || |||||||| ||||||||||| ||||| ||||| |||||||| || | Sbjct 73101 TCTACGGAAGCTAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATCACTTCCATA 73042 Query 21522 CCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAG-C 21580 |||||||| |||||||| | ||||||||||| ||||||||||| | || | || | | Sbjct 73041 CCAAGGTTTGCACGGTTGATGATGTCAGCCCAAGTGTTGATCACACGGCCTTG-GCTGTC 72983 Query 21581 TAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAG 21640 | || ||||||||| ||||||||||| || | |||||| ||||| || | ||||| Sbjct 72982 AACCACAGATTGGTTGAAGTTGAAACCGTTAAGGTTGAACGCCATAGTGCTGATACCAAG 72923 Query 21641 CGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGA 21700 |||| |||||| || ||||| |||||||| ||||| || ||||| || | | ||| || Sbjct 72922 AGCAGTAAACCAGATGCCTACTACAGGCCAAGCAGCTAGGAAGAAGTGCAAAGAACGAGA 72863 Query 21701 ATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAAT 21760 || || |||||||| |||||||| || || |||||||| || ||||||||||| || || Sbjct 72862 GTTGTTGAAGCTAGCGTATTGGAAAATTAGGCGACCAAAGTAACCGTGAGCAGCCACGAT 72803 Query 21761 ATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGT 21820 |||||||| || | ||||||||||||||||||||| ||| || | | |||||| Sbjct 72802 GTTGTAAGTTTCACCTTCTTGACCAAACTTGTAACCAGCGTTAGCAGACTCGTTTTCAGT 72743 Query 21821 CGTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCC 21880 |||||||| || | || || |||| | ||| ||||||||| |||| | || Sbjct 72742 AGTCTCACGGATTAAGCTGGAAGTAACCAAGGAACCATGCATAGCACTAAACAGAGAGCC 72683 Query 21881 ACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGC 21940 ||||| ||||| |||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct 72682 GCCAAACACGCCAGCCACACCAAGCATGTGGAAAGGGTGCATAAGAATGTTGTGCTCAGC 72623 Query 21941 CTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAA 22000 |||||||| | ||| ||||||| |||||||| || || | |||||| ||||||| || Sbjct 72622 TTGGAACACAATCATAAAGTTGAAAGTGCCGGAAATGCCAAGAGGCATACCATCAGAGAA 72563 Query 22001 AGAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGA 22060 ||| || |||| || || | | |||||| || || ||||| || || |||||||| Sbjct 72562 GCTGCCTTGACCAATAGGGTAGATCAAGAACACTGCGGTAGCAGCTGCAACCGGAGCAGA 72503 Query 22061 GTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCC 22120 ||| || ||| ||||| || | ||| || | || ||||||| |||||||| || || Sbjct 72502 GTAAGCTACAGCAATCCAAGGACGCATGCCCAAACGGAAGCTAAGCTCCCACTCACGGCC 72443 Query 22121 CATGTAAGCAA---AGACGCCAATGAGGAAGTGGA 22152 ||||| ||||| | || ||||| |||||||||| Sbjct 72442 CATGT-AGCAAGCCACAC-CCAAT-AGGAAGTGGA 72411 Score = 159 bits (176), Expect = 1e-34 Identities = 205/278 (74%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 22170 GGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGT 22229 || ||||||||||| |||||||||||||| | |||||| ||||| || ||||||||||| Sbjct 44201 GGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAGTGA 44260 Query 22230 AGTCCGATGGCATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAAC 22289 || || |||||| | | | || | | || || || ||||||||||||||||||| | Sbjct 44261 AGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATACAGC 44320 Query 22290 AGGGAGCCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAG 22349 | || |||| || || || || || ||||||||||| ||||| || || | | ||| Sbjct 44321 AAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATGAAG 44380 Query 22350 GCGATAATAAA-AC--AAGTTGTAGCGGCAAGGAGGCACGGAATCATAAGGACTCCGAAC 22406 || |||||||| || | |||| | | ||| ||| || ||||| || || || ||| Sbjct 44381 GCAATAATAAACACGGAGGTTGCA--GTCAA-TAGGGTAGGGATCATTAGAACACCAAAC 44437 Query 22407 CATCCTACATAAAGACGGTTATTAGTAGAGGTGACCCA 22444 || || | ||||| ||||| | ||| ||| ||||| Sbjct 44438 CAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCA 44475 Score = 159 bits (176), Expect = 1e-34 Identities = 205/278 (74%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 22170 GGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGT 22229 || ||||||||||| |||||||||||||| | |||||| ||||| || ||||||||||| Sbjct 135157 GGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAGTGA 135098 Query 22230 AGTCCGATGGCATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAAC 22289 || || |||||| | | | || | | || || || ||||||||||||||||||| | Sbjct 135097 AGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATACAGC 135038 Query 22290 AGGGAGCCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAG 22349 | || |||| || || || || || ||||||||||| ||||| || || | | ||| Sbjct 135037 AAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATGAAG 134978 Query 22350 GCGATAATAAA-AC--AAGTTGTAGCGGCAAGGAGGCACGGAATCATAAGGACTCCGAAC 22406 || |||||||| || | |||| | | ||| ||| || ||||| || || || ||| Sbjct 134977 GCAATAATAAACACGGAGGTTGCA--GTCAA-TAGGGTAGGGATCATTAGAACACCAAAC 134921 Query 22407 CATCCTACATAAAGACGGTTATTAGTAGAGGTGACCCA 22444 || || | ||||| ||||| | ||| ||| ||||| Sbjct 134920 CAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCA 134883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146204850496920