Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq1813 379 3e-100 >seq1813 Length=181482 Score = 379 bits (420), Expect = 3e-100 Identities = 501/689 (73%), Gaps = 8/689 (1%) Strand=Plus/Minus Query 7888 GATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAG 7947 || |||| ||| | ||||||||||| || || | || ||||| ||||||||||| | | Sbjct 73095 GAAGCTAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATCACTTCCATACCAAGG 73036 Query 7948 TTTGCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTAC--CATTAACA-TCAACA 8004 ||||| | ||| | | |||| |||| || |||| || | || | ||||| Sbjct 73035 TTTGCACGGTTGATGATGTCAGCCCAAGTGT---TGATCACACGGCCTTGGCTGTCAACC 72979 Query 8005 ACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAA 8064 || |||||||| ||||| || ||||||||||| || ||||| |||| ||||| | || | Sbjct 72978 ACAGATTGGTTGAAGTTGAAACCGTTAAGGTTGAACGCCATAGTGCTGATACCAAGAGCA 72919 Query 8065 GTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTG 8124 || ||||| | | ||| || || | | ||| ||||||||||| | | | | |||| Sbjct 72918 GTAAACCAGATGCCTACTACAGGCCAAGCAGCTAGGAAGAAGTGCAAAGAACGAGAGTTG 72859 Query 8125 TTAAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTA 8184 || || || || ||||| |||| | ||||||||| || |||||||| || || || Sbjct 72858 TTGAAGCTAGCGTATTGGAAAATTAGGCGACCAAAGTAACCGTGAGCAGCCACGATGTTG 72799 Query 8185 TAGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTC 8244 || || || |||||||||||||||| |||||| ||| |||||| | |||||| ||| Sbjct 72798 TAAGTTTCACCTTCTTGACCAAACTTGTAACCAGCGTTAGCAGACTCGTTTTCAGTAGTC 72739 Query 8245 TCTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCG 8304 || | ||||| || ||||| || ||||| ||||||||||| || || || || || Sbjct 72738 TCACGGATTAAGCTGGAAGTAACCAAGGAACCATGCATAGCACTAAACAGAGAGCCGCCA 72679 Query 8305 AACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGG 8364 |||| || || || || ||| |||||||| |||||||||||||| ||||| |||||| Sbjct 72678 AACACGCCAGCCACACCAAGCATGTGGAAAGGGTGCATAAGAATGTTGTGCTCAGCTTGG 72619 Query 8365 AATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAA 8424 || || | ||| ||||| || || || ||||| || |||||||| ||||||||||| Sbjct 72618 AACACAATCATAAAGTTGAAAGTGCCGGAAATGCCAAGAGGCATACCATCAGAGAAGCTG 72559 Query 8425 CCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATAT 8484 || ||||||| || || | |||||||||||| |||||| | || |||||| || Sbjct 72558 CCTTGACCAATAGGGTAGATCAAGAACACTGCGGTAGCAGCTGCAACCGGAGCAGAGTAA 72499 Query 8485 GCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAA-CTCCCACTGTCTACCCAT 8543 |||||| ||||| || | ||| || || ||| | | ||| |||||||| | ||||| Sbjct 72498 GCTACAGCAATCCAAGGACGCATGCCCAAACGG-AAGCTAAGCTCCCACTCACGGCCCAT 72440 Query 8544 GTAAGCAGAAATTCCAATAAGGAAGTGGA 8572 ||| || | || | |||||||||| Sbjct 72439 GTAGCAAGCCACACCCAATAGGAAGTGGA 72411 Score = 183 bits (202), Expect = 4e-41 Identities = 215/288 (75%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 8587 TATGGACCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAG 8646 || || || ||||| || | ||| ||||| | | ||||| ||||| || || |||||| Sbjct 44198 TAAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAG 44257 Query 8647 TGTAATCCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATAC 8706 || | ||||| || || | || | | ||||||||||||||||||||| |||||| Sbjct 44258 TGAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATAC 44317 Query 8707 ATGAATGAACCTGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATA 8766 | || ||||| | |||||| ||||||||||| ||||| || ||||| |||||||| || Sbjct 44318 AGCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATG 44377 Query 8767 AATGCCACGATAAAGCAAGTA-GCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAA 8825 || || | ||||| || | | | |||| || | | ||| ||||||||||| ||||| Sbjct 44378 AAGGCAATAATAAA-CACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAA 44436 Query 8826 CCAACCGACATAAAGTCTGTTGTTTGTACTTGTAACCCACTCGCAAAA 8873 |||||||| ||||| | ||| | || || |||||||| ||||| || Sbjct 44437 CCAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCATTCGCAGAA 44484 Score = 183 bits (202), Expect = 4e-41 Identities = 215/288 (75%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 8587 TATGGACCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAG 8646 || || || ||||| || | ||| ||||| | | ||||| ||||| || || |||||| Sbjct 135160 TAAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAG 135101 Query 8647 TGTAATCCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATAC 8706 || | ||||| || || | || | | ||||||||||||||||||||| |||||| Sbjct 135100 TGAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATAC 135041 Query 8707 ATGAATGAACCTGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATA 8766 | || ||||| | |||||| ||||||||||| ||||| || ||||| |||||||| || Sbjct 135040 AGCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATG 134981 Query 8767 AATGCCACGATAAAGCAAGTAGCA-GCAGCTAACAAGCAAGGAATCATTAGAACTCCAAA 8825 || || | ||||| || | || |||| || | | ||| ||||||||||| ||||| Sbjct 134980 AAGGCAATAATAAA-CACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAA 134922 Query 8826 CCAACCGACATAAAGTCTGTTGTTTGTACTTGTAACCCACTCGCAAAA 8873 |||||||| ||||| | ||| | || || |||||||| ||||| || Sbjct 134921 CCAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCATTCGCAGAA 134874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615848435320080