Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq1813 562 3e-155 >seq1813 Length=181482 Score = 562 bits (622), Expect = 3e-155 Identities = 737/1012 (73%), Gaps = 14/1012 (1%) Strand=Plus/Plus Query 167026 GATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 167085 |||||||||||| | ||| | ||||| |||||||| ||||| || | ||| | || Sbjct 117406 GATGACTGGCTTCGTCGTGATAGGTTTGTATTTGTTGGTTGGTCAGGTTTACTTTTGTTC 117465 Query 167086 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGG 167145 || |||||| ||||| |||||||||||||||| || || ||||| || || ||| Sbjct 117466 CCTTGTGCTTACTTTGCTCTTGGCGGTTGGCTTACCGGAACAACTTTTGTAACATCATGG 117525 Query 167146 TATACTCATGGACTCGCGTCCAGTTATCTTGAGGG-TGCGAACTTTCTTACTGCGGCAGT 167204 ||||||||||| | || | ||| |||||||| ||| |||||| | ||||| || || Sbjct 117526 TATACTCATGGGTTGGCAAGCTCTTACCTTGAGGGCTGC-AACTTTTTGACTGCTGCCGT 117584 Query 167205 TAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTTCTATGG---GGTCCTGAATC 167261 || ||||| | ||| ||||||| ||| | |||||| || || ||| | Sbjct 117585 GTCAACCCCAGCTAACAGCTTGGCTCATTCT---CTTTTACTATGGTGGGGGCCGGAAGC 117641 Query 167262 TCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCA 167321 |||||| ||||| | ||| ||||| || || || ||| ||||||| || | || Sbjct 117642 TCAAGGAGATTTTACTCGTTGGTGTCAACTAGGTGGTCTTTGGACTTTTGTAGCTTTGCA 117701 Query 167322 CGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGC-CTGATTG 167380 || || |||| | ||||| ||||||||||| || |||||| | |||||| ||| Sbjct 117702 TGGTGCTTTTGGCTTGATTGGATTCATGCTTCGCCAATTTGAATTGGCTCGCTCTGTCCA 117761 Query 167381 GTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTCTTCGTTAGCGTTT 167440 | | || || || || || |||||||| ||||| |||||| | || || || || | Sbjct 117762 AT-TACGACCTTATAACGCCATTGCTTTTTCTGGACCTATTTCAGTTTTTGTATCTGTGT 117820 Query 167441 TCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCCTTCGGAGTCGCCG 167500 || | | ||||| || |||||| | ||||||||||| || || ||||| || | Sbjct 117821 TCTTAATTTATCCTCTTGGTCAATCAGGTTGGTTCTTTGCTCCAAGTTTTGGAGTTGCAG 117880 Query 167501 CCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGGACACTGAATCCATTTC 167560 | |||||||| ||| | | || ||||||| || || ||||||||||| || || || | Sbjct 117881 CAATCTTCCGTTTCATTTTGTTTTTCCAAGGTTTTCATAACTGGACACTTAACCCTTTCC 117940 Query 167561 ATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAATCCATGGTGTTA 167620 ||||||||||||| || ||| | | || | ||| | || | |||||| ||||| | | Sbjct 117941 ATATGATGGGTGTGGCTGGTGTTTTAGGAGCTGCTCTTCTCTGTGCAATTCATGGCGCAA 118000 Query 167621 CAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTTAAGGCATTCGATT 167680 | || || || ||||||| ||||||||| || || |||||||| || || | Sbjct 118001 CTGTGGAAAACACTTTGTTTGAAGATGGAGATGGTGCGAACACTTTCCGTGCCTTTAACC 118060 Query 167681 CTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCT 167740 |||| ||| ||||| || ||||| |||||||| |||||||| |||||||||||||||| Sbjct 118061 CTACACAGTCCGAAGAAACATATTCCATGGTTACTGCAAACCGTTTCTGGTCTCAGATCT 118120 Query 167741 TCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTA 167800 | || |||||||| |||||||| |||||||||||||||||| | || ||||| || | Sbjct 118121 TTGGTATTGCTTTTTCGAACAAACGATGGCTTCATTTCTTTATGCTTTTTGTTCCTGTAA 118180 Query 167801 TGGGACTTTGGACATCATCG--ATTGGCATCATTGGTCTGGCTCTTAATCTTCGTGCTTA 167858 ||| |||||| || | || ||||| | | ||||| ||||| |||||| | || || Sbjct 118181 CGGGGCTTTGG--ATGAGCGCAATTGGTGTAGTAGGTCTTGCTCTCAATCTTAGAGCATA 118238 Query 167859 CGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAACTTTCTATAC 167918 ||||| || ||||||||||| |||| || || ||||| || ||||||||||| || || Sbjct 118239 TGATTTTGTATCTCAAGAGATTCGAGCTGCAGAAGATCCTGAATTTGAAACTTTTTACAC 118298 Query 167919 TAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCGATCAACCTCA 167978 |||||||| ||| | ||||| ||| | ||||| ||| | || || ||||| ||||| Sbjct 118299 AAAAAACATTCTTTTAAATGAGGGTATCCGAGCCTGGATGGCCGCTCAAGATCAGCCTCA 118358 Query 167979 TGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTATAA 168030 ||| || |||| ||||| ||||| || || ||||| || ||||| || ||| Sbjct 118359 TGAAAATCTTGTATTCCCTGAGGAGGTCCTACCACGTGGAAACGCTCTTTAA 118410 Score = 511 bits (566), Expect = 5e-140 Identities = 508/658 (77%), Gaps = 0/658 (0%) Strand=Plus/Plus Query 166095 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGT 166154 ||||||||| ||||||||||| || | |||| | || |||||||| ||||| ||| Sbjct 72436 CTACATGGGCCGTGAGTGGGAGCTTAGCTTCCGTTTGGGCATGCGTCCTTGGATTGCTGT 72495 Query 166155 TGCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGGTCA 166214 |||||||| || || || || ||||| | ||||| ||| | | || ||| | ||||| Sbjct 72496 AGCTTACTCTGCTCCGGTTGCAGCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCA 72555 Query 166215 AGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGT 166274 ||| || |||||||||| ||||| || || || || || || ||||||| ||| | || Sbjct 72556 AGGCAGCTTCTCTGATGGTATGCCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGT 72615 Query 166275 CTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGT 166334 ||||||||||||||||| ||||| ||||| || ||||| ||||| || || ||||| || Sbjct 72616 GTTCCAAGCTGAGCACAACATTCTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGT 72675 Query 166335 ATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAG 166394 ||||| ||| | |||||||||||||||| || ||||||||||| | | | Sbjct 72676 GTTTGGCGGCTCTCTGTTTAGTGCTATGCATGGTTCCTTGGTTACTTCCAGCTTAATCCG 72735 Query 166395 AGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAAC 166454 ||||| ||||||| ||| || ||| ||||||||||| || ||||||| ||||| Sbjct 72736 TGAGACTACTGAAAACGAGTCTGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAAAC 72795 Query 166455 ATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATT 166514 ||||||||||| || ||||| |||||||| ||||| | || |||||||||||| || Sbjct 72796 TTACAACATCGTGGCTGCTCACGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGCTT 72855 Query 166515 CAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTT 166574 ||||||||| || || |||||||||||||| ||||| |||||||| || ||||||||||| Sbjct 72856 CAACAACTCTCGTTCTTTGCACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGGTT 72915 Query 166575 CACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 166634 || || ||||| || ||| ||||| |||||||| |||||||||||||||||||| || Sbjct 72916 TACTGCTCTTGGTATCAGCACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAATC 72975 Query 166635 CATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAACCGCGCTGG 166694 | |||| | || || |||||| | ||||| ||||| || | | ||||| || Sbjct 72976 TGTGGTTGACAGCCAAGGCCGTGTGATCAACACTTGGGCTGACATCATCAACCGTGCAAA 73035 Query 166695 TCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCCCTCGACCTCGCT 166752 || ||||||||||| ||||| ||||||||||| ||||||||||| || ||||| ||| Sbjct 73036 CCTTGGTATGGAAGTGATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTAGCT 73093 Score = 242 bits (268), Expect = 4e-59 Identities = 226/287 (79%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 |||||||||||||||||||||||| | ||||| || || |||||||||||||| || Sbjct 44485 CTTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCT 44426 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCC 165887 ||||| || || || ||| | ||||| | || || | ||||||||||||||||| Sbjct 44425 AATGATCCCTACCCTATTGACTGCAACCTCCGTGTTTATTATTGCCTTCATCGCTGCTCC 44366 Query 165888 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACAA 165947 |||||||||||||| || || ||||| || || |||||||| || ||||||||||||| Sbjct 44365 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 44306 Query 165948 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCAT 166007 ||||||||||||||| || | || | || || |||||||| |||||||| || || Sbjct 44305 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 44246 Query 166008 CTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTT 166054 |||||| || || || ||||| |||||||| || ||||| || |||| Sbjct 44245 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 44199 Score = 242 bits (268), Expect = 4e-59 Identities = 226/287 (79%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 |||||||||||||||||||||||| | ||||| || || |||||||||||||| || Sbjct 134873 CTTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCT 134932 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCC 165887 ||||| || || || ||| | ||||| | || || | ||||||||||||||||| Sbjct 134933 AATGATCCCTACCCTATTGACTGCAACCTCCGTGTTTATTATTGCCTTCATCGCTGCTCC 134992 Query 165888 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACAA 165947 |||||||||||||| || || ||||| || || |||||||| || ||||||||||||| Sbjct 134993 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 135052 Query 165948 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCAT 166007 ||||||||||||||| || | || | || || |||||||| |||||||| || || Sbjct 135053 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 135112 Query 166008 CTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTT 166054 |||||| || || || ||||| |||||||| || ||||| || |||| Sbjct 135113 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 135159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561235273701600