Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq1813 437 2e-118 >seq1813 Length=181482 Score = 437 bits (484), Expect = 2e-118 Identities = 515/697 (74%), Gaps = 0/697 (0%) Strand=Plus/Plus Query 42584 TCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACTTTCGT 42643 ||||| |||||||||| | ||| | | ||| |||| || || ||||| ||| | Sbjct 72405 TCGTGCTCCACTTCCTATTGGGTGTGGCTTGCTACATGGGCCGTGAGTGGGAGCTTAGCT 72464 Query 42644 ACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGCAGCGA 42703 ||| | || ||| | || ||||| ||| ||||||||||| || || || || || | Sbjct 72465 TCCGTTTGGGCATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCGGTTGCAGCTGCTA 72524 Query 42704 CTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCTCTTG 42763 | ||||| ||| | |||| || |||| ||||| || || ||||| |||||||||| Sbjct 72525 CCGCAGTGTTCTTGATCTACCCTATTGGTCAAGGCAGCTTCTCTGATGGTATGCCTCTTG 72584 Query 42764 GCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGC 42823 |||||||||| || |||||||| ||| | || ||||| ||||| || ||||||||||||| Sbjct 72585 GCATTTCCGGCACTTTCAACTTTATGATTGTGTTCCAAGCTGAGCACAACATTCTTATGC 72644 Query 42824 ATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGC 42883 | |||||||| ||||||||||| || ||||| ||||| || || |||| ||||||| Sbjct 72645 ACCCTTTCCACATGCTTGGTGTGGCTGGCGTGTTTGGCGGCTCTCTGTTTAGTGCTATGC 72704 Query 42884 ATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATT 42943 ||||| | || || || | | ||||| || ||||||||||| || Sbjct 72705 ATGGTTCCTTGGTTACTTCCAGCTTAATCCGTGAGACTACTGAAAACGAGTCTGCTAACG 72764 Query 42944 ATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACT 43003 ||| |||||||| |||||||| | || ||||| ||||| || || || || ||||||| Sbjct 72765 CTGGTTACAAGTTTGGTCAAGAAGGTGAAACTTACAACATCGTGGCTGCTCACGGTTACT 72824 Query 43004 TTGGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACTTCTTTC 43063 |||| || || || |||||||| || || || || ||| |||||||||||||| | Sbjct 72825 TTGGTCGCCTAATTTTCCAATACGCTAGCTTCAACAACTCTCGTTCTTTGCACTTCTTCC 72884 Query 43064 TTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGT 43123 | || |||||||| || || || || ||||| ||| ||||||| |||| |||||||||| Sbjct 72885 TAGCTGCTTGGCCTGTAGTAGGCATCTGGTTTACTGCTCTTGGTATCAGCACTATGGCGT 72944 Query 43124 TTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCC 43183 | ||| | || ||||| ||||| |||||||| | ||||| | || | ||| ||| Sbjct 72945 TCAACCTTAACGGTTTCAACTTCAACCAATCTGTGGTTGACAGCCAAGGCCGTGTGATCA 73004 Query 43184 CTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGA 43243 ||||||||||| || | || ||||| |||||||| | || |||||||||||||| | Sbjct 73005 ACACTTGGGCTGACATCATCAACCGTGCAAACCTTGGTATGGAAGTGATGCACGAGCGTA 73064 Query 43244 ATGCACATAACTTCCCGCTTGATCTTGCATCCGTGGA 43280 | || || |||||||| ||||| || || ||||| || Sbjct 73065 ACGCTCACAACTTCCCTCTTGACCTAGCTTCCGTAGA 73101 Score = 183 bits (202), Expect = 9e-42 Identities = 200/266 (75%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 42310 ACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCGCT 42369 ||| | ||||| ||||| | || ||||||||||| || ||||| || || | || Sbjct 44463 ACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATCCCTACCCTATTGACT 44404 Query 42370 GCTACCACCTGTTTTATTGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCATT 42429 || ||| || |||||| | || ||||| ||||| ||||| || ||||| ||||| ||| Sbjct 44403 GCAACCTCCGTGTTTATTATTGCCTTCATCGCTGCTCCTCCTGTGGACATCGATGGTATT 44344 Query 42430 CGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTG 42489 ||||| ||||| ||||| ||| | |||||||| |||||||||||||||||||| | | Sbjct 44343 CGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATCTCTGGTGCTATTATC 44284 Query 42490 CCTAGCAGTAACGCAATTGGACTACATTTGTATTCGATCTGGGAAGCCAATACCCTTGAC 42549 |||| | | || ||||| || || || || | |||||||| || | ||||||| Sbjct 44283 CCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAGGCTGCTTCCCTTGAT 44224 Query 42550 GAATGGCTCTACAATGGCGGACCTTA 42575 |||||||| ||||| ||||| ||||| Sbjct 44223 GAATGGCTTTACAACGGCGGCCCTTA 44198 Score = 183 bits (202), Expect = 9e-42 Identities = 200/266 (75%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 42310 ACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCGCT 42369 ||| | ||||| ||||| | || ||||||||||| || ||||| || || | || Sbjct 134895 ACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATCCCTACCCTATTGACT 134954 Query 42370 GCTACCACCTGTTTTATTGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCATT 42429 || ||| || |||||| | || ||||| ||||| ||||| || ||||| ||||| ||| Sbjct 134955 GCAACCTCCGTGTTTATTATTGCCTTCATCGCTGCTCCTCCTGTGGACATCGATGGTATT 135014 Query 42430 CGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTG 42489 ||||| ||||| ||||| ||| | |||||||| |||||||||||||||||||| | | Sbjct 135015 CGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATCTCTGGTGCTATTATC 135074 Query 42490 CCTAGCAGTAACGCAATTGGACTACATTTGTATTCGATCTGGGAAGCCAATACCCTTGAC 42549 |||| | | || ||||| || || || || | |||||||| || | ||||||| Sbjct 135075 CCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAGGCTGCTTCCCTTGAT 135134 Query 42550 GAATGGCTCTACAATGGCGGACCTTA 42575 |||||||| ||||| ||||| ||||| Sbjct 135135 GAATGGCTTTACAACGGCGGCCCTTA 135160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143529708124072