Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq1813 304 4e-78 >seq1813 Length=181482 Score = 304 bits (336), Expect = 4e-78 Identities = 421/582 (72%), Gaps = 8/582 (1%) Strand=Plus/Minus Query 25874 GATGCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGG 25933 || |||| |||||| || ||||| ||||| |||||||||||||| ||||| | || ||| Sbjct 73095 GAAGCTAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATCACTTCCATACCAAGG 73036 Query 25934 TTAGCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTC--CATTAACA-TCTACT 25990 || || ||||| | | |||||||| || || | ||| | | || | || || Sbjct 73035 TTTGCACGGTTGATGATGTCAGCCCAAGT--GT-TGATCACACGGCCTTGGCTGTCAACC 72979 Query 25991 ACTGACTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGAT 26050 || || ||||| ||||| ||||| || ||||| || ||||| |||| |||||| | || Sbjct 72978 ACAGATTGGTTGAAGTTGAAACCGTTAAGGTTGAACGCCATAGTGCTGATACCAAGAGCA 72919 Query 26051 GTCAGCCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTA 26110 || | ||| ||||| || || ||||||| ||| || ||||| || | |||||| ||| Sbjct 72918 GTAAACCAGATGCCTACTACAGGCCAAGCAGCTAGGAAGAAGTGCAAAGAACGAGAGTTG 72859 Query 26111 TTAAAACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTA 26170 || || || || || || ||||||| | |||||||| ||||| ||||| || || || Sbjct 72858 TTGAAGCTAGCGTATTGGAAAATTAGGCGACCAAAGTAACCGTGAGCAGCCACGATGTTG 72799 Query 26171 TATGTCTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTT 26230 || || || | ||||| |||||||| || ||| || || | | || || || Sbjct 72798 TAAGTTTCACCTTCTTGACCAAACTTGTAACCAGCGTTAGCAGACTCGTTTTCAGTAGTC 72739 Query 26231 TCT-GCAATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACC 26289 || | | |||| |||||||||||| || ||||||||| || |||| || || Sbjct 72738 TCACGGATTAAGCT-GGAAGTAACCAAGGAACCATGCATAGCACTAAACAGAGAGCCGCC 72680 Query 26290 GAAAACCCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTG 26349 || || ||||| |||||| ||| ||||| |||||||| || || || || || ||||| Sbjct 72679 AAACACGCCAGCCACACCAAGCATGTGGAAAGGGTGCATAAGAATGTTGTGCTCAGCTTG 72620 Query 26350 GAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACT 26409 ||| || | ||||||||| ||||| || || || ||||||||||| |||||| || || Sbjct 72619 GAACACAATCATAAAGTTGAAAGTGCCGGAAATGCCAAGAGGCATACCATCAGAGAAGCT 72560 Query 26410 CCCTTGTCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGC 26451 ||||| || | ||| || | |||||||||||| ||| || Sbjct 72559 GCCTTGACCAATAGGGTAGATCAAGAACACTGCGGTAGCAGC 72518 Score = 149 bits (164), Expect = 2e-31 Identities = 210/291 (72%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 26573 TATGGTCCGCCATTGTATAGCCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAA 26632 || || ||||| ||||| ||||| || || || | |||| |||||||| ||||| || Sbjct 44198 TAAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAG 44257 Query 26633 TGTAGTCCGATTGCGTTAGAGGAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTAC 26692 || || || || || ||||| |||| | || || || || || ||||| || ||| Sbjct 44258 TGAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATAC 44317 Query 26693 ATTAACGAGCCGGAAACTGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATG 26752 | || || || ||||| |||||||| || ||||| || || ||||| || || |||||| Sbjct 44318 AGCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATG 44377 Query 26753 AAGGCAAGTATAAAACATGTAGTGGCTGCGAGTAAGCAGGGT----ATCATAAGCACCCC 26808 ||||||| || ||||| | | || ||| ||| | ||||| ||||| || || || Sbjct 44378 AAGGCAA-TAATAAACACG--GAGGTTGC-AGTCAATAGGGTAGGGATCATTAGAACACC 44433 Query 26809 GAACCATCCCACATAGAGACGGTTCTCAGTACTTGTAACCCACTCACAAAA 26859 ||||| || | || || ||||| ||||| || |||||||| || || || Sbjct 44434 AAACCAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCATTCGCAGAA 44484 Score = 149 bits (164), Expect = 2e-31 Identities = 210/291 (72%), Gaps = 8/291 (3%) Strand=Plus/Minus Query 26573 TATGGTCCGCCATTGTATAGCCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAA 26632 || || ||||| ||||| ||||| || || || | |||| |||||||| ||||| || Sbjct 135160 TAAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAG 135101 Query 26633 TGTAGTCCGATTGCGTTAGAGGAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTAC 26692 || || || || || ||||| |||| | || || || || || ||||| || ||| Sbjct 135100 TGAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATAC 135041 Query 26693 ATTAACGAGCCGGAAACTGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATG 26752 | || || || ||||| |||||||| || ||||| || || ||||| || || |||||| Sbjct 135040 AGCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATG 134981 Query 26753 AAGGCAAGTATAAAACATGTAGTGGCTGCGAGTAAGCAGGGT----ATCATAAGCACCCC 26808 ||||||| || ||||| | | || ||| ||| | ||||| ||||| || || || Sbjct 134980 AAGGCAA-TAATAAACACG--GAGGTTGC-AGTCAATAGGGTAGGGATCATTAGAACACC 134925 Query 26809 GAACCATCCCACATAGAGACGGTTCTCAGTACTTGTAACCCACTCACAAAA 26859 ||||| || | || || ||||| ||||| || |||||||| || || || Sbjct 134924 AAACCAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCATTCGCAGAA 134874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147708818098880