Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq1813 502 3e-137 >seq1813 Length=181482 Score = 502 bits (556), Expect = 3e-137 Identities = 504/652 (77%), Gaps = 2/652 (0%) Strand=Plus/Plus Query 155302 GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATAC 155361 || ||| ||||||| ||| | |||| | ||||||||||||||||| ||| || ||| Sbjct 72443 GGCCGTGAGTGGGAGCTTAGCTTCCGTTTGGGCATGCGTCCTTGGATTGCTGTAGCTTAC 72502 Query 155362 TCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCT 155421 ||||| || || | ||||| ||| || ||| | | || ||| | |||||||| Sbjct 72503 TCTGCTCCGGTTGCAGCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCAAGGCAGC 72562 Query 155422 TTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAA 155481 |||||||||| ||||||||||| || || || ||||| |||| |||| | ||||||||| Sbjct 72563 TTCTCTGATGGTATGCCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGTGTTCCAA 72622 Query 155482 GCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGT 155541 || || ||||| || ||||||||||| |||||||||||||| || || || ||||| || Sbjct 72623 GCTGAGCACAACATTCTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGTGTTTGGC 72682 Query 155542 GGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACT 155601 || ||||| || ||||||||| ||||| ||||| || || |||||||||| ||| Sbjct 72683 GGCTCTCTGTTTAGTGCTATGCATGGTTCCTTGGTTACTTCCAGCTTAATCCGTGAGACT 72742 Query 155602 ACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAAC 155661 ||||| | |||||| ||| |||||||||||| || ||||||| |||||||| ||| Sbjct 72743 ACTGAAAACGAGTCTGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAAACTTACAAC 72802 Query 155662 ATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAAC 155721 || || |||||||| || ||||| ||||| || || ||||| || || |||||||||| Sbjct 72803 ATCGTGGCTGCTCACGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGCTTCAACAAC 72862 Query 155722 TCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCT 155781 || | | | ||||||||||| ||||| |||||||| || |||||||| |||||| Sbjct 72863 TCTCGTTCTTTGCACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGGTTTACTGCT 72922 Query 155782 ATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTA 155841 | ||| | || ||||| ||||||||||||||||||||||||||||| ||||| || Sbjct 72923 CTTGGTATCAGCACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAATCTGTGGTT 72982 Query 155842 GAC-GCTAGTGGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGG 155900 ||| || | || || ||| || ||||| ||||| | ||||| || ||||| Sbjct 72983 GACAGCCA-AGGCCGTGTGATCAACACTTGGGCTGACATCATCAACCGTGCAAACCTTGG 73041 Query 155901 TATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCT 155952 ||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 73042 TATGGAAGTGATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTAGCT 73093 Score = 224 bits (248), Expect = 1e-53 Identities = 223/286 (78%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 ||||| | ||||| || |||| |||||| | || |||||||||| |||||||| | Sbjct 44483 TCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTAA 44424 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGC-TACATGCTTCATTGTCGCCTTCATTGCTGCACCT 155088 |||||||| ||| | |||| | | | || || ||| | |||||||| ||||| ||| Sbjct 44423 TGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCCT 44365 Query 155089 CCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAAC 155148 ||||| ||||| |||||||||||||| || || |||||||||| |||||||||||||| Sbjct 44364 CCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAAC 44305 Query 155149 ATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATT 155208 ||||||||||||||| || |||||| || || |||||||| |||||||| ||||| Sbjct 44304 ATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTATC 44245 Query 155209 TGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTT 155254 ||||| || || | |||||||| ||| | ||||| || || |||| Sbjct 44244 TGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 44199 Score = 224 bits (248), Expect = 1e-53 Identities = 223/286 (78%), Gaps = 2/286 (1%) Strand=Plus/Plus Query 154970 TCTGCCAGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTA 155029 ||||| | ||||| || |||| |||||| | || |||||||||| |||||||| | Sbjct 134875 TCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTAA 134934 Query 155030 TGATCCCTTGCCTCCTCGCTGCTGC-TACATGCTTCATTGTCGCCTTCATTGCTGCACCT 155088 |||||||| ||| | |||| | | | || || ||| | |||||||| ||||| ||| Sbjct 134935 TGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCCT 134993 Query 155089 CCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAAC 155148 ||||| ||||| |||||||||||||| || || |||||||||| |||||||||||||| Sbjct 134994 CCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAAC 135053 Query 155149 ATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATT 155208 ||||||||||||||| || |||||| || || |||||||| |||||||| ||||| Sbjct 135054 ATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTATC 135113 Query 155209 TGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTT 155254 ||||| || || | |||||||| ||| | ||||| || || |||| Sbjct 135114 TGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 135159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584821938861840