Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq1813 358 2e-94 >seq1813 Length=181482 Score = 358 bits (396), Expect = 2e-94 Identities = 469/647 (72%), Gaps = 2/647 (0%) Strand=Plus/Minus Query 40530 GAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGA 40589 ||||||| ||| ||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct 73095 GAAGCTAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATCACTTCCATACCAAGG 73036 Query 40590 CTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGC-GTCTACTAC 40648 | | ||| | | ||||||||||| || || || || || ||| || || Sbjct 73035 TTTGCACGGTTGATGATGTCAGCCCAAGTGTTGATCACACGGCC-TTGGCTGTCAACCAC 72977 Query 40649 TGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGT 40708 || ||||| ||||| ||||| || ||||| || |||||||| ||||| | | || Sbjct 72976 AGATTGGTTGAAGTTGAAACCGTTAAGGTTGAACGCCATAGTGCTGATACCAAGAGCAGT 72917 Query 40709 AAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTT 40768 || ||| ||||| | || || ||||| | || |||||||| | | ||| ||||| Sbjct 72916 AAACCAGATGCCTACTACAGGCCAAGCAGCTAGGAAGAAGTGCAAAGAACGAGAGTTGTT 72857 Query 40769 GAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATA 40828 ||| ||| ||||| || ||||| | ||||||||||||||| ||||| |||||||| || Sbjct 72856 GAAGCTAGCGTATTGGAAAATTAGGCGACCAAAGTAACCGTGAGCAGCCACGATGTTGTA 72797 Query 40829 AGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTC 40888 ||| || ||||| ||||||||||| || || ||| || || |||| || ||||| Sbjct 72796 AGTTTCACCTTCTTGACCAAACTTGTAACCAGCGTTAGCAGACTCGTTTTCAGTAGTCTC 72737 Query 40889 CCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAA 40948 || || | ||||||||| | | || ||||||||| ||||| || || ||||| Sbjct 72736 ACGGATTAAGCTGGAAGTAACCAAGGAACCATGCATAGCACTAAACAGAGAGCCGCCAAA 72677 Query 40949 GACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAA 41008 ||||| || || || ||||| ||||| |||||||| ||||||||||| || |||||||| Sbjct 72676 CACGCCAGCCACACCAAGCATGTGGAAAGGGTGCATAAGAATGTTGTGCTCAGCTTGGAA 72617 Query 41009 GACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACC 41068 |||| ||| |||||||| || || || || | |||||||||||||||||| || Sbjct 72616 CACAATCATAAAGTTGAAAGTGCCGGAAATGCCAAGAGGCATACCATCAGAGAAGCTGCC 72557 Query 41069 CTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGC 41128 ||||| | || || | ||||| || || ||| |||| | ||||| | ||| || Sbjct 72556 TTGACCAATAGGGTAGATCAAGAACACTGCGGTAGCAGCTGCAACCGGAGCAGAGTAAGC 72497 Query 41129 CACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACT 41175 ||| ||||| || | ||| || | | | | ||| ||||||| Sbjct 72496 TACAGCAATCCAAGGACGCATGCCCAAACGGAAGCTAAGCTCCCACT 72450 Score = 181 bits (200), Expect = 3e-41 Identities = 209/279 (75%), Gaps = 2/279 (1%) Strand=Plus/Plus Query 41229 TATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAA 41288 || || ||||||||||| ||||| || || || | | || |||||||| |||||||| Sbjct 44198 TAAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAG 44257 Query 41289 TGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTAC 41348 || || || || || |||| | || | | ||| ||||| || || ||||| || ||| Sbjct 44258 TGAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATAC 44317 Query 41349 ATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATA 41408 | || || || ||||| |||||||| || ||||| || || ||||| || || ||||| Sbjct 44318 AGCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATG 44377 Query 41409 AAGGCGATTATGAAACA-TGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAA 41467 ||||| || || ||||| | ||| ||||| | || | || |||||||| |||||||| Sbjct 44378 AAGGCAATAAT-AAACACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAA 44436 Query 41468 CCAACCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCA 41506 |||||| | ||| |||||||| || ||||| || ||||| Sbjct 44437 CCAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCA 44475 Score = 181 bits (200), Expect = 3e-41 Identities = 209/279 (75%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 41229 TATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAA 41288 || || ||||||||||| ||||| || || || | | || |||||||| |||||||| Sbjct 135160 TAAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAG 135101 Query 41289 TGTAGTCCGATTGCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTAC 41348 || || || || || |||| | || | | ||| ||||| || || ||||| || ||| Sbjct 135100 TGAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATAC 135041 Query 41349 ATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATA 41408 | || || || ||||| |||||||| || ||||| || || ||||| || || ||||| Sbjct 135040 AGCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATG 134981 Query 41409 AAGGCGATTATGAAACATGT-GGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAA 41467 ||||| || || ||||| | ||| ||||| | || | || |||||||| |||||||| Sbjct 134980 AAGGCAATAAT-AAACACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAA 134922 Query 41468 CCAACCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCA 41506 |||||| | ||| |||||||| || ||||| || ||||| Sbjct 134921 CCAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCA 134883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143699304470676