Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq1813 504 8e-138 >seq1813 Length=181482 Score = 504 bits (558), Expect = 8e-138 Identities = 506/654 (77%), Gaps = 6/654 (1%) Strand=Plus/Minus Query 67361 AGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCC 67420 ||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 73093 AGCTAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATCACTTCCATACCAAGGTT 73034 Query 67421 TGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCT--GC-GTCAACGAC 67477 ||| | ||| | |||||| |||||||| ||||| || ||| || |||||| || Sbjct 73033 TGCACGGTTGATGATGTCAGCCCAAGTGTTGATCAC---ACGGCCTTGGCTGTCAACCAC 72977 Query 67478 GGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGT 67537 ||||||||||||||||||||||| |||||||| |||||||| | ||| | ||||| Sbjct 72976 AGATTGGTTGAAGTTGAAACCGTTAAGGTTGAACGCCATAGTGCTGATACCAAGAGCAGT 72917 Query 67538 GAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTT 67597 |||||||||| || ||||| | ||||| ||||||||||| | | | |||||||| Sbjct 72916 AAACCAGATGCCTACTACAGGCCAAGCAGCTAGGAAGAAGTGCAAAGAACGAGAGTTGTT 72857 Query 67598 GAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTA 67657 ||| || || ||||| || | |||||| ||||| || |||||||| || |||||||| Sbjct 72856 GAAGCTAGCGTATTGGAAAATTAGGCGACCAAAGTAACCGTGAGCAGCCACGATGTTGTA 72797 Query 67658 AGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTC 67717 ||| || ||||||| || ||||||||||| ||| ||||| | |||||||| || Sbjct 72796 AGTTTCACCTTCTTGACCAAACTTGTAACCAGCGTTAGCAGACTCGTTTTCAGTAGTCTC 72737 Query 67718 TCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAA 67777 | ||| | |||||||| | ||||| |||||||||||||| || || || || || Sbjct 72736 ACGGATTAAGCTGGAAGTAACCAAGGAACCATGCATAGCACTAAACAGAGAGCCGCCAAA 72677 Query 67778 TACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAA 67837 || || || || |||||||| ||||| ||||||||||| ||||||||||| |||||||| Sbjct 72676 CACGCCAGCCACACCAAGCATGTGGAAAGGGTGCATAAGAATGTTGTGCTCAGCTTGGAA 72617 Query 67838 CACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACC 67897 ||| | ||| |||| ||||| || ||||| ||||||||||| | |||||||| || Sbjct 72616 CACAATCATAAAGTTGAAAGTGCCGGAAATGCCAAGAGGCATACCATCAGAGAAGCTGCC 72557 Query 67898 TTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATGC 67957 |||||| | ||| |||| ||||||||| ||| || || | || ||||||||||| || Sbjct 72556 TTGACCAATAGGGTAGATCAAGAACACTGCGGTAGCAGCTGCAACCGGAGCAGAGTAAGC 72497 Query 67958 TACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACC 68011 |||| |||||||||||||| || | |||| | ||| ||||||| ||| || Sbjct 72496 TACAGCAATCCAAGGACGCATGCCCAAACGGAAGCTAAGCTCCCACTCACGGCC 72443 Score = 145 bits (160), Expect = 9e-30 Identities = 190/263 (72%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 68059 AAGGTCCACCATTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGT 68118 |||| || || || || | ||| ||||| || | || || ||||||||||| ||||||| Sbjct 44199 AAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAGT 44258 Query 68119 GAAGACCGATTGCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACA 68178 ||||||| || || || |||| | || ||||||||| |||||||||||||| |||| Sbjct 44259 GAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATACA 44318 Query 68179 TGAGCGAACCTGCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGA 68238 | ||||| | |||||| || | ||||||||||| || || ||||| || || |||| Sbjct 44319 GCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATGA 44378 Query 68239 ATGCAATGATGAAGCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACC 68298 | ||||| || || | | ||| | | | | ||| ||||| | ||||| |||| Sbjct 44379 AGGCAATAATAAACACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAACC 44438 Query 68299 AACCAACATAGATGCGATTGTCA 68321 |||| | || | ||| || ||| Sbjct 44439 AACCGATGTAAAGGCGGTTTTCA 44461 Score = 145 bits (160), Expect = 9e-30 Identities = 190/263 (72%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 68059 AAGGTCCACCATTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGT 68118 |||| || || || || | ||| ||||| || | || || ||||||||||| ||||||| Sbjct 135159 AAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAGT 135100 Query 68119 GAAGACCGATTGCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACA 68178 ||||||| || || || |||| | || ||||||||| |||||||||||||| |||| Sbjct 135099 GAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATACA 135040 Query 68179 TGAGCGAACCTGCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGA 68238 | ||||| | |||||| || | ||||||||||| || || ||||| || || |||| Sbjct 135039 GCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATGA 134980 Query 68239 ATGCAATGATGAAGCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACC 68298 | ||||| || || | | ||| | | | | ||| ||||| | ||||| |||| Sbjct 134979 AGGCAATAATAAACACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAACC 134920 Query 68299 AACCAACATAGATGCGATTGTCA 68321 |||| | || | ||| || ||| Sbjct 134919 AACCGATGTAAAGGCGGTTTTCA 134897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566934344472240