Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq1813 603 1e-167 >seq1813 Length=181482 Score = 603 bits (668), Expect = 1e-167 Identities = 744/1009 (74%), Gaps = 6/1009 (1%) Strand=Plus/Minus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || ||||| || || || || || |||||||||| |||||||| || | Sbjct 118411 ATTAAAGAGCGTTTCCACGTGGTAGGACCTCCTCAGGGAATACAAGATTTTCATGAGGCT 118352 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || |||| ||| || || | ||| ||||| || |||||||| |||||||| | Sbjct 118351 GATCTTGAGCGGCCATCCAGGCTCGGATACCCTCATTTAAAAGAATGTTTTTTGTGTAAA 118292 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | || || || || || |||||||| |||| |||||||| |||||||| ||||| || | Sbjct 118291 AAGTTTCAAATTCAGGATCTTCTGCAGCTCGAATCTCTTGAGATACAAAATCATATGCTC 118232 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 ||| |||||||||||||| | | ||| || | || ||||||| ||| | ||||||| Sbjct 118231 TAAGATTGAGAGCAAGACCTACTACACCAATTGCGCTCATCCAAAGCCCCGTTACAGGAA 118172 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 |||| | |||||||||||| | ||| | || || ||| ||||||||||||||||||| Sbjct 118171 CAAAAAGCATAAAGAAATGAAGCCATCGTTTGTTCGAAAAAGCAATACCAAAGATCTGAG 118112 Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945 ||||||| ||||||||||||||||| || || |||||||| || |||| || || | Sbjct 118111 ACCAGAAACGGTTTGCAGTAACCATGGAATATGTTTCTTCGGACTGTGTAGGGTTAAAGG 118052 Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCAT 67005 | ||||||||| || || ||||||||| ||| ||| || || || || | |||| Sbjct 118051 CACGGAAAGTGTTCGCACCATCTCCATCTTCAAACAAAGTGTTTTCCACAGTTGCGCCAT 117992 Query 67006 GAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGT 67065 |||| ||| | || | ||| | || | | ||| || |||||||||||||| || |||| Sbjct 117991 GAATTGCACAGAGAAGAGCAGCTCCTAAAACACCAGCCACACCCATCATATGGAAAGGGT 117932 Query 67066 TCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCC 67125 | | ||||||||||| || ||||| | || | || ||| || |||||||||| || | Sbjct 117931 TAAGTGTCCAGTTATGAAAACCTTGGAAAAACAAAATGAAACGGAAGATTGCTGCAACTC 117872 Query 67126 CGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAA 67185 | ||| |||||| || ||||||| |||||||| ||||| || || | || ||| | Sbjct 117871 CAAAACTTGGAGCAAAGAACCAACCTGATTGACCAAGAGGATAAATTAAGAACACAGATA 117812 Query 67186 CAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGA-TGAGA 67244 ||||||| | ||||| ||||| || ||||| || || || || || | || ||| Sbjct 117811 CAAAAACTGAAATAGGTCCAGAAAAAGCAATGGCGTTATAAGGTCGTAATTGGACAGAG- 117753 Query 67245 CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCC 67304 || |||| |||||| |||||||||||||| ||||| | | ||||| || || | || Sbjct 117752 CGAGCCAATTCAAATTGGCGAAGCATGAATCCAATCAAGCCAAAAGCACCATGCAAAGCT 117693 Query 67305 ACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGA 67364 |||||| |||| || || || ||||| ||| || ||||| || |||| || || Sbjct 117692 ACAAAAGTCCAAAGACCACCTAGTTGACACCAACGAGTAAAATCTCCTTGAGCTTCCGGC 117633 Query 67365 CCCCAAAGTAGAAGAAGAGAATGACCCATAGC-ATCAGCAGGCGTTGACACAGCCGCTGT 67423 ||||| ||| | |||||||||| ||| ||| | ||| || |||||||| || || || Sbjct 117632 CCCCACCATAGTAAAAGAGAATGAGCCA-AGCTGTTAGCTGGGGTTGACACGGCAGCAGT 117574 Query 67424 GAGAAAATTAGCA-CCCTCAAGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGA 67482 | |||| | ||| |||||||| ||| || | || ||||| ||||| ||| | Sbjct 117573 CA-AAAAGTTGCAGCCCTCAAGGTAAGAGCTTGCCAACCCATGAGTATACCATGATGTTA 117515 Query 67483 CAAACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAAGTA 67542 |||| || || || |||||||| || |||| || | |||||| || || | ||||| Sbjct 117514 CAAAAGTTGTTCCGGTAAGCCAACCGCCAAGAGCAAAGTAAGCACAAGGGAACAAAAGTA 117455 Query 67543 GTCCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATC 67591 || |||||||| ||||| ||||| | ||| || |||||||||||| Sbjct 117454 AACCTGACCAACCAACAAATACAAACCTATCACGACGAAGCCAGTCATC 117406 Score = 542 bits (600), Expect = 3e-149 Identities = 531/682 (78%), Gaps = 2/682 (0%) Strand=Plus/Minus Query 67842 AGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACC 67901 ||| ||||| |||||||||||||| ||||||||||| ||||| ||||||||||| | Sbjct 73093 AGCTAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATCACTTCCATACCAAGGTT 73034 Query 67902 AGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATAGA 67961 || ||||||| | ||| ||||| || | || || || |||| | ||| Sbjct 73033 TGCACGGTTGATGATGTCAGCCCAAGTGTTGATCACACGGCCTTGGCTGTCAACCACAGA 72974 Query 67962 CTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAA 68021 ||||||||||||||||| || |||||||| ||||| ||||| | |||||| ||||| || Sbjct 72973 TTGGTTGAAGTTGAAACCGTTAAGGTTGAACGCCATAGTGCTGATACCAAGAGCAGTAAA 72914 Query 68022 CCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAA 68081 |||||| || || |||||||| ||||| ||||||||||||| ||||| ||||||||||| Sbjct 72913 CCAGATGCCTACTACAGGCCAAGCAGCTAGGAAGAAGTGCAAAGAACGAGAGTTGTTGAA 72854 Query 68082 CGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGT 68141 || || ||||| || || ||||| ||||| || || ||||| || ||||||||||| Sbjct 72853 GCTAGCGTATTGGAAAATTAGGCGACCAAAGTAACCGTGAGCAGCCACGATGTTGTAAGT 72794 Query 68142 CTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACG 68201 || |||||||||| |||||||||||| ||| ||||| ||||||| || ||||| Sbjct 72793 TTCACCTTCTTGACCAAACTTGTAACCAGCGTTAGCAGACTCGTTTTCAGTAGTCTCACG 72734 Query 68202 AACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATAC 68261 | | |||||||||| |||||||||||| ||||| |||||||| || ||||| || Sbjct 72733 GATTAAGCTGGAAGTAACCAAGGAACCATGCATAGCACTAAACAGAGAGCCGCCAAACAC 72674 Query 68262 GCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAACAC 68321 |||||| || || ||||| ||||| |||||||| || ||||||||||| ||||||||||| Sbjct 72673 GCCAGCCACACCAAGCATGTGGAAAGGGTGCATAAGAATGTTGTGCTCAGCTTGGAACAC 72614 Query 68322 CAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTTG 68381 | ||| |||||||||| || |||||||| |||||||| | |||||||| ||||| Sbjct 72613 AATCATAAAGTTGAAAGTGCCGGAAATGCCAAGAGGCATACCATCAGAGAAGCTGCCTTG 72554 Query 68382 ACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAAC 68441 ||| | ||| |||| || ||| ||||||| || |||||||| || |||||||| || || Sbjct 72553 ACCAATAGGGTAGATCAAGAACACTGCGGTAGCAGCTGCAACCGGAGCAGAGTAAGCTAC 72494 Query 68442 ACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTATGC 68501 | |||||||||||||| || | ||| || ||| ||||| ||||| |||||||| || Sbjct 72493 AGCAATCCAAGGACGCATGCCCAAACGGAAGCTAAGCTCCCACTCACGGCCCATGTA-GC 72435 Query 68502 AA-AGATACCAATCAGGAAGTG 68522 || | ||| | |||||||| Sbjct 72434 AAGCCACACCCAATAGGAAGTG 72413 Score = 262 bits (290), Expect = 5e-65 Identities = 232/287 (81%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 68540 AAGGACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGT 68599 |||| || || ||||| | ||| |||||||||| || || ||||| || || || |||| Sbjct 44199 AAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAGT 44258 Query 68600 GAAGACCAATTGCATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACA 68659 |||||||||| ||| || |||| | || ||||||||| ||||||||||||||||||| Sbjct 44259 GAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATACA 44318 Query 68660 GAAGTGAACCAGCAACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGA 68719 | | ||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 44319 GCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATGA 44378 Query 68720 AGGCGACGATGAAACA-GATGGTTGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAAC 68778 |||| | || ||||| | |||||| | | || ||||||||||| || || || ||| Sbjct 44379 AGGCAATAAT-AAACACGGAGGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAAC 44437 Query 68779 CAACCAACGTAAAGGCGGTTCTCTGTGGAAGTCACCCATTCGCAGAA 68825 ||||| | |||||||||||| || ||| || |||||||||||||| Sbjct 44438 CAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCATTCGCAGAA 44484 Score = 262 bits (290), Expect = 5e-65 Identities = 232/287 (81%), Gaps = 2/287 (1%) Strand=Plus/Minus Query 68540 AAGGACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGT 68599 |||| || || ||||| | ||| |||||||||| || || ||||| || || || |||| Sbjct 135159 AAGGGCCGCCGTTGTAAAGCCATTCATCAAGGGAAGCAGCCTCCCAGATAGGGTAGAAGT 135100 Query 68600 GAAGACCAATTGCATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACA 68659 |||||||||| ||| || |||| | || ||||||||| ||||||||||||||||||| Sbjct 135099 GAAGACCAATGGCAGCAGAGGTAGGGATAATAGCACCAGAGATGATGTTGTTACCATACA 135040 Query 68660 GAAGTGAACCAGCAACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGA 68719 | | ||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 135039 GCAAAGAACCAGAAACAGGCTCACGAATACCATCGATGTCCACAGGAGGAGCAGCGATGA 134980 Query 68720 AGGCGACGATGAA-ACAGATGGTTGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAAC 68778 |||| | || || || || |||||| | | || ||||||||||| || || || ||| Sbjct 134979 AGGCAATAATAAACACGGA-GGTTGCAGTCAATAGGGTAGGGATCATTAGAACACCAAAC 134921 Query 68779 CAACCAACGTAAAGGCGGTTCTCTGTGGAAGTCACCCATTCGCAGAA 68825 ||||| | |||||||||||| || ||| || |||||||||||||| Sbjct 134920 CAACCGATGTAAAGGCGGTTTTCAGTGCTGGTAACCCATTCGCAGAA 134874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572041428666480