Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq1813 614 6e-171 seq810 87.8 2e-12 >seq1813 Length=181482 Score = 614 bits (680), Expect = 6e-171 Identities = 741/1003 (74%), Gaps = 4/1003 (0%) Strand=Plus/Plus Query 152371 GATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 152430 |||||||||||| | || | || || |||||||||||||| || | ||| | || Sbjct 117406 GATGACTGGCTTCGTCGTGATAGGTTTGTATTTGTTGGTTGGTCAGGTTTACTTTTGTTC 117465 Query 152431 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGG 152490 || |||||| ||||| |||||||||||||||| || || ||||| | || ||| Sbjct 117466 CCTTGTGCTTACTTTGCTCTTGGCGGTTGGCTTACCGGAACAACTTTTGTAACATCATGG 117525 Query 152491 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 152550 |||||||| ||||||||||| || || || |||||| |||||| | ||||| || || Sbjct 117526 TATACTCATGGGTTGGCAAGCTCTTACCTTGAGGGCTGCAACTTTTTGACTGCTGCCGTG 117585 Query 152551 TCTACTCCAGCAGAT-GCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCA 152609 || || ||||| | ||| ||| |||||||||| | || ||||| || || ||||| Sbjct 117586 TCAACCCCAGCTAACAGCT-TGGCTCATTCTCTTTTACTATGGTGGGGGCCGGAAGCTCA 117644 Query 152610 AGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTTGTGGCGCTCCACGG 152669 ||| ||||| | ||| ||| || || || || ||| ||||||| || | || || Sbjct 117645 AGGAGATTTTACTCGTTGGTGTCAACTAGGTGGTCTTTGGACTTTTGTAGCTTTGCATGG 117704 Query 152670 GGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCACGTCTCA-TCGGTA 152728 ||||| | | || || |||||||||||||| |||||| |||| || ||| || Sbjct 117705 TGCTTTTGGCTTGATTGGATTCATGCTTCGCCAATTTGAATTGGCTCG-CTCTGTCCAAT 117763 Query 152729 TCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTC 152788 | || || || || || ||||| || ||||| ||||| | |||||||| || || Sbjct 117764 TACGACCTTATAACGCCATTGCTTTTTCTGGACCTATTTCAGTTTTTGTATCTGTGTTCT 117823 Query 152789 TCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAA 152848 | || || ||||| |||||||| ||||||| || |||||| ||| || || ||||||| Sbjct 117824 TAATTTATCCTCTTGGTCAATCAGGTTGGTTCTTTGCTCCAAGTTTTGGAGTTGCAGCAA 117883 Query 152849 TCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGAATCCGTTTCATA 152908 ||||||| ||| || | || | ||||| || || ||||||||| | || || || |||| Sbjct 117884 TCTTCCGTTTCATTTTGTTTTTCCAAGGTTTTCATAACTGGACACTTAACCCTTTCCATA 117943 Query 152909 TGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCATGGTGTTACAG 152968 |||||||||| || ||| |||| |||| || | || | ||| |||||||| | || | Sbjct 117944 TGATGGGTGTGGCTGGTGTTTTAGGAGCTGCTCTTCTCTGTGCAATTCATGGCGCAACTG 118003 Query 152969 TAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAGCTTTCGACAGCA 153028 | || || ||||||| | ||||||| || || ||||||||| || || || | Sbjct 118004 TGGAAAACACTTTGTTTGAAGATGGAGATGGTGCGAACACTTTCCGTGCCTTTAACCCTA 118063 Query 153029 CTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTG 153088 | || ||||| || ||||| ||||||||||| |||||||||||||| ||||| |||| Sbjct 118064 CACAGTCCGAAGAAACATATTCCATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTG 118123 Query 153089 GAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGG 153148 | ||||||||| || ||||| |||||||||||||||||||| ||||| ||||| | || Sbjct 118124 GTATTGCTTTTTCGAACAAACGATGGCTTCATTTCTTTATGCTTTTTGTTCCTGTAACGG 118183 Query 153149 GTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATT 153208 | ||||||| | ||||| | | |||||||||||||||||| | || || |||| Sbjct 118184 GGCTTTGGATGAGCGCAATTGGTGTAGTAGGTCTTGCTCTCAATCTTAGAGCATATGATT 118243 Query 153209 TTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAGA 153268 ||||||||||||| || | || ||||||||||||||||||| || || || || || | Sbjct 118244 TTGTATCTCAAGAGATTCGAGCTGCAGAAGATCCTGAATTTGAAACTTTTTACACAAAAA 118303 Query 153269 ATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGACCAACCTCATGAGA 153328 | || ||||| || || ||| | || || ||| |||| || || || |||||||| | Sbjct 118304 ACATTCTTTTAAATGAGGGTATCCGAGCCTGGATGGCCGCTCAAGATCAGCCTCATGAAA 118363 Query 153329 ACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371 | | || |||||||| ||||| | ||||| || |||||||| Sbjct 118364 ATCTTGTATTCCCTGAGGAGGTCCTACCACGTGGAAACGCTCT 118406 Score = 580 bits (642), Expect = 1e-160 Identities = 544/686 (79%), Gaps = 6/686 (1%) Strand=Plus/Plus Query 151140 TCCACTTCCTGATTGGTAT--CTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTACCG 151197 |||||||||| | ||| | || |||| ||||||| ||||||||||| || | ||| Sbjct 72411 TCCACTTCCTATTGGGTGTGGCT-TGCT-ACATGGGCCGTGAGTGGGAGCTTAGCTTCCG 72468 Query 151198 CTTGGGTATGCGTCCCTGGATCTGC-GTTGCATACTCTGCTCCAGTTGCTGCTGCGAGTG 151256 ||||| |||||||| ||||| ||| || || ||||||||||| ||||| ||||| | | Sbjct 72469 TTTGGGCATGCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCGGTTGCAGCTGCTACCG 72527 Query 151257 CAGTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTA 151316 |||||||| | |||| ||| | |||||||| |||||||||| ||||| || || | Sbjct 72528 CAGTGTTCTTGATCTACCCTATTGGTCAAGGCAGCTTCTCTGATGGTATGCCTCTTGGCA 72587 Query 151317 TTTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCACC 151376 |||| ||||| ||||||| ||| |||| |||||||| |||||||||||||| ||||||| Sbjct 72588 TTTCCGGCACTTTCAACTTTATGATTGTGTTCCAAGCTGAGCACAACATTCTTATGCACC 72647 Query 151377 CCTTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCACG 151436 | ||||| ||||||||||||||||| || || || || || || || || ||||| | Sbjct 72648 CTTTCCACATGCTTGGTGTGGCTGGCGTGTTTGGCGGCTCTCTGTTTAGTGCTATGCATG 72707 Query 151437 GTTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTATG 151496 |||| |||||||||| | | |||||||| || ||||||||||| ||| || Sbjct 72708 GTTCCTTGGTTACTTCCAGCTTAATCCGTGAGACTACTGAAAACGAGTCTGCTAACGCTG 72767 Query 151497 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTTG 151556 |||||||||| |||||||||| || || ||||||||||| || || ||||||||||||| Sbjct 72768 GTTACAAGTTTGGTCAAGAAGGTGAAACTTACAACATCGTGGCTGCTCACGGTTACTTTG 72827 Query 151557 GTCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCG 151616 |||| || || |||||||||||| ||||||||| || ||||| ||||||||||||| | Sbjct 72828 GTCGCCTAATTTTCCAATACGCTAGCTTCAACAACTCTCGTTCTTTGCACTTCTTCCTAG 72887 Query 151617 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCA 151676 | || |||||||| || || |||||||| ||||| |||||| ||||||| ||||| |||| Sbjct 72888 CTGCTTGGCCTGTAGTAGGCATCTGGTTTACTGCTCTTGGTATCAGCACTATGGCGTTCA 72947 Query 151677 ACCTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACA 151736 |||| |||||||||||||||||||| || | | || | || ||| || | |||| Sbjct 72948 ACCTTAACGGTTTCAACTTCAACCAATCTGTGGTTGACAGCCAAGGCCGTGTGATCAACA 73007 Query 151737 CCTGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 151796 | ||||| ||| | | ||||||||| || ||||||||||| |||||||||||||| | Sbjct 73008 CTTGGGCTGACATCATCAACCGTGCAAACCTTGGTATGGAAGTGATGCACGAGCGTAACG 73067 Query 151797 CTCACAACTTCCCTCTCGACCTTGCT 151822 |||||||||||||||| ||||| ||| Sbjct 73068 CTCACAACTTCCCTCTTGACCTAGCT 73093 Score = 239 bits (264), Expect = 5e-58 Identities = 230/295 (78%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 150830 TGGGACAACTTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTC 150889 |||| | ||| || || ||||||||| ||| | ||||| || || |||||||||| Sbjct 44493 TGGGGCCGCTTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTT 44434 Query 150890 GGTGTGCTGATGATTCCAACTCTGTTGGCAGCAACCATTTGCTTCATCGTGGCATTCATC 150949 ||||| || ||||| || || || ||| | |||||| || || | || |||||| Sbjct 44433 GGTGTTCTAATGATCCCTACCCTATTGACTGCAACCTCCGTGTTTATTATTGCCTTCATC 44374 Query 150950 GCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTAC 151009 |||||||| ||||||||||||||||| || ||||| || ||| |||||||| || |||| Sbjct 44373 GCTGCTCCTCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTAT 44314 Query 151010 GGTAACAACATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTC 151069 |||||||||||||||||||||||| || | ||| | ||| || || ||||| |||||| Sbjct 44313 GGTAACAACATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTC 44254 Query 151070 TATCCCATCTGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTT 151124 || || |||||||| || || || || ||||||||||| |||||||| || |||| Sbjct 44253 TACCCTATCTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 44199 Score = 239 bits (264), Expect = 5e-58 Identities = 230/295 (78%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 150830 TGGGACAACTTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTC 150889 |||| | ||| || || ||||||||| ||| | ||||| || || |||||||||| Sbjct 134865 TGGGGCCGCTTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTT 134924 Query 150890 GGTGTGCTGATGATTCCAACTCTGTTGGCAGCAACCATTTGCTTCATCGTGGCATTCATC 150949 ||||| || ||||| || || || ||| | |||||| || || | || |||||| Sbjct 134925 GGTGTTCTAATGATCCCTACCCTATTGACTGCAACCTCCGTGTTTATTATTGCCTTCATC 134984 Query 150950 GCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTAC 151009 |||||||| ||||||||||||||||| || ||||| || ||| |||||||| || |||| Sbjct 134985 GCTGCTCCTCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTAT 135044 Query 151010 GGTAACAACATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTC 151069 |||||||||||||||||||||||| || | ||| | ||| || || ||||| |||||| Sbjct 135045 GGTAACAACATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTC 135104 Query 151070 TATCCCATCTGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTT 151124 || || |||||||| || || || || ||||||||||| |||||||| || |||| Sbjct 135105 TACCCTATCTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 135159 >seq810 Length=18296 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 151995 GATGACCAGTACATCTTGGATGCTGCTGAGGAACAAGGA-GTTGATATGAACTACTCTTG 152053 || ||| | |||||| ||||||||||||| |||| | |||| || |||||| || Sbjct 5153 GAGGACGAATACATCCTGGATGCTGCTGA-GAACGCCAACATTGACCTGCCCTACTCCTG 5095 Query 152054 TCGTGCTGGTGCATGTTCCTCTTGTGCTGGTAAGATTGTGAGTGGTACAGTTGATCAGAG 152113 || || || || || || ||||| || | ||| ||| || ||||| || ||||| Sbjct 5094 CCGCGCGGGCGCGTGCTCGAGCTGTGCGGGCATGATCGTGGAGGGCACAGTGGACCAGAG 5035 Query 152114 TGACCAATCATTCTTGGATGATGACCAGATTGAATCAGGATTCGTGCTGACCTGTGTTGC 152173 ||||| || ||| |||| || | ||| || || | | | ||||| || || || Sbjct 5034 CGACCAGTCCTTCCTGGACGACGGGCAGCAGGAGAAGGGCTACATTCTGACGTGCGTCGC 4975 Query 152174 ATATCCAACTTCTGATGTCACCCTCATGACTGAACAAGAGGAGTCGCTCTACTGA 152228 || ||||| || || |||||| | |||| | ||||| ||| ||||||||| Sbjct 4974 GTACCCAACCTCGGACGTCACCATTCTGACCCACCAAGAAGAGGAACTCTACTGA 4920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549609937312080