Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1541 122 8e-23 seq1776 104 2e-17 seq1075 86.0 6e-12 >seq1541 Length=115782 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || || || || || || || | | | Sbjct 45217 ATGCAGATCTTTGTGAAGACCCTGACCGGGAAGACCATCACCCTGGAGGTGGAGTCAAGC 45158 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | ||||| ||||| || ||||| |||||||| ||||| || || Sbjct 45157 GACACCATCGACAACGTAAAGGCCAAGATTCAGGACAAGGAAGGAATCCCTCCTGACCAG 45098 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||| || || || |||||||||||| |||| | || | || |||||| Sbjct 45097 CAGAGGCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGAACCCTGGCTGACTATAAC 45038 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || || ||||||||| Sbjct 45037 ATCCAGAAGGAGTCCACTCTTCACTTGGTG 45008 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || |||||||| || || || || | Sbjct 43049 ATGCAGATCTTTGTCAAGACCCTGACTGGGAAGACCATTACGCTAGAGGTTGAGAGCAGC 42990 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || || || || || Sbjct 42989 GACACCATTGATAATGTGAAGGCTAAGATTCAGGATAAGGAGGGTATCCCGCCTGACCAG 42930 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||| |||||||| || ||| |||||||| | | | | | | ||||| ||| Sbjct 42929 CAGAGGCTGATTTTTGCCGGCAAGCAGTTGGAGGATGGGCGTACCCTTGCTGATTACAAC 42870 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| ||||| ||||| || ||| ||||| Sbjct 42869 ATTCAGAAGGAGTCGACCCTGCACCTGGTG 42840 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || || || || ||||| || || || ||| | Sbjct 43277 ATGCAGATCTTCGTCAAAACCCTCACTGGCAAGACCATCACGCTTGAGGTTGAGTCCAGC 43218 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || || || Sbjct 43217 GACACCATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCACCAGACCAG 43158 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || || ||||| || ||| |||||||| | | | | || | || || ||| Sbjct 43157 CAGAGGCTTATTTTCGCCGGCAAGCAGTTGGAGGATGGGCGTACCCTGGCTGACTACAAC 43098 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| ||||| || ||||||||| Sbjct 43097 ATCCAGAAGGAGTCGACCCTGCACTTGGTG 43068 Score = 87.8 bits (96), Expect = 2e-12 Identities = 97/128 (76%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 24805 AGGAATACCTCCCGATCAA-CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGA 24863 ||| || ||||| || ||| || ||| ||||||||||||| || ||||| |||||| Sbjct 43405 AGGTATTCCTCCGGACCAAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTC 43346 Query 24864 GAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGC 24923 | | | || | || || ||||| |||||||| || || || ||| ||||| | || ||| Sbjct 43345 GTACCCTGGCCGACTACAACATCCAAAAGGAGTCTACTCTCCACCTGGTGCTACGGCTGC 43286 Query 24924 GCGGAGGC 24931 |||||||| Sbjct 43285 GCGGAGGC 43278 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG 24864 ||| || ||||| || || || ||| | ||||||||||| || ||| |||||||| ||| Sbjct 44611 AGGTATCCCTCCGGACCAGCAGCGTCTCATCTTTGCCGGCAAGCAGTTGGAGGATGGGAG 44552 Query 24865 AAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924 | | || | || || |||||||| ||||| || || || || |||| || ||||| | Sbjct 44551 GACCCTGGCTGACTACAACATTCAGAAGGAGTCCACCCTGCATCTGGTTCTGAGATTGAG 44492 Query 24925 CGGAGG 24930 ||||| Sbjct 44491 GGGAGG 44486 >seq1776 Length=305386 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || ||||| || || || || || | | | Sbjct 213865 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 213924 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || |||||||| ||||| || || || || Sbjct 213925 GACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAAGAGGGAATTCCCCCTGACCAG 213984 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||| || || || |||||||||||| || | | | | ||||| || Sbjct 213985 CAGAGGCTTATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCGGATTACAAT 214044 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || || ||||||||| Sbjct 214045 ATCCAGAAGGAGTCCACTCTTCACTTGGTG 214074 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG 24864 ||| || ||||| || || || |||||||| || || || || ||||| ||||| | Sbjct 216111 AGGCATCCCTCCAGACCAGCAGCGTTTGATTTTCGCTGGCAAGCAGCTCGAGGACGGTCG 216170 Query 24865 AAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924 | | || | || || ||||| ||||||||||| || || ||| ||||| |||| |||| Sbjct 216171 CACCCTGGCTGACTACAACATCCAAAAGGAATCCACTCTTCACCTGGTGCTGCGTCTGCG 216230 Query 24925 CGGAGG 24930 |||||| Sbjct 216231 CGGAGG 216236 >seq1075 Length=42261 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 24734 AAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATC 24793 ||||| || || |||||||| || | | ||||| | || || || ||| |||||| Sbjct 14684 AAAACCATAACCCTCGAAGTGGAGTCATCAGACACCATTGACACTGTCAAAGCCAAGATC 14743 Query 24794 CAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTG 24853 || ||||| || || || || || || || || || | ||||| ||||| || |||||| Sbjct 14744 CAGGACAAGGAGGGGATTCCCCCAGACCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTG 14803 Query 24854 GAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| | | || | ||||| ||||| || || || || || || || ||||| Sbjct 14804 GAGGACGGCCGCACGCTGGCTGATTACAACATCCAGAAAGAGTCTACTCTCCATTTGGTA 14863 Query 24914 TTGCGATTGCGCGGAGG 24930 || || | || ||||| Sbjct 14864 TTAAGACTCCGAGGAGG 14880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449887398571920