Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1541 132 3e-26 seq1776 131 1e-25 seq1075 82.4 5e-11 >seq1541 Length=115782 Score = 132 bits (146), Expect = 3e-26 Identities = 170/232 (73%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| ||| || |||| ||| | ||| ||||||||| ||||| ||||| | Sbjct 43051 CCACCCCTCAGCCTGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 43110 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | ||| |||| |||| ||||| |||||||| || || | ||||||||| | || Sbjct 43111 AGGGTACGCCCATCCTCCAACTGCTTGCCGGCGAAAATAAGCCTCTGCTGGTCTGGTGGG 43170 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926 | ||||||||||| | || || ||||| || | ||||| || ||| ||| Sbjct 43171 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGCTGGACTC 43226 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||| || |||||||| || |||||||| || || |||||||||||| Sbjct 43227 AACCTCAAGCGTGATGGTCTTGCCAGTGAGGGTTTTGACGAAGATCTGCATG 43278 Score = 127 bits (140), Expect = 1e-24 Identities = 168/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| ||| || |||||||| | ||| ||||||||||||||| || || | Sbjct 42823 CCTCCCCTCAGCCTGAGCACCAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAATCAGCA 42882 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | ||| |||| |||| ||||| ||||| || ||||| | |||||||| |||| Sbjct 42883 AGGGTACGCCCATCCTCCAACTGCTTGCCGGCAAAAATCAGCCTCTGCTGGTCAGGCGGG 42942 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926 | |||||||| || | || || || || || |||| || || || ||| Sbjct 42943 ATACCCTCCTTATCCTGAATCTTAGCCTTCAC--AT--TATCAATGGTGTCGCTGCTCTC 42998 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || |||||||| || || |||||||| |||||||||||||| Sbjct 42999 AACCTCTAGCGTAATGGTCTTCCCAGTCAGGGTCTTGACAAAGATCTGCAT 43049 Score = 127 bits (140), Expect = 1e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||| || ||| || |||| ||||| ||| ||||||||| ||||||||||| | Sbjct 44991 CCACCCCGCAGCCTGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAGTCAGCC 45050 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | | |||| ||||| ||||| || |||||||| || | |||||||| | || Sbjct 45051 AGGGTTCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCAGGAGGG 45110 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || | || | | ||| || Sbjct 45111 ATTCCTTCCTTGTCCTGAATCTTGGCCTTTACGTTGTCGATGGTGTCGCTTGACTCCACC 45170 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || | ||| |||||||| || || |||||||| ||||||||||||||||| Sbjct 45171 TCCAGGGTGATGGTCTTCCCGGTCAGGGTCTTCACAAAGATCTGCATGAT 45220 Score = 100 bits (110), Expect = 2e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| ||||| ||||| || | |||| ||||||||||||||| ||||| | Sbjct 44486 CCTCCCCTCAATCTCAGAACCAGATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCC 44545 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||| | | | |||| |||| ||||| ||||| ||||| || || |||||||| Sbjct 44546 AGGGTCCTCCCATCCTCCAACTGCTTGCCGGCAAAGATGAGACGCTGCTGGTC 44598 >seq1776 Length=305386 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| ||| || |||| ||| | ||| ||||||||||||||| ||||| | Sbjct 216464 CCACCCCTCAGCCTGAGCACCAAGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGGCC 216405 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| |||| ||||| ||||||||||||| | ||||||||| | || Sbjct 216404 AGAGTGCGGCCATCCTCCAACTGCTTCCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGA 216345 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926 | |||||||| || | || || ||||| || | ||||| || ||| ||| Sbjct 216344 ATGCCCTCCTTATCCTGAATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGCTGGACTC 216289 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| |||| || |||||||| || |||||||| || || ||||| ||||| Sbjct 216288 GACCTCAAGCGTGATGGTCTTGCCAGTGAGGGTTTTGACGAAGATTTGCAT 216238 Score = 127 bits (140), Expect = 1e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| ||| || |||| ||||| ||| ||||||||| || || || |||| Sbjct 214091 CCTCCCCTCAGCCTGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATATTGTAATCCGCA 214032 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | | |||| ||||| ||||| || |||||||| || | |||||||| | || Sbjct 214031 AGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATAAGCCTCTGCTGGTCAGGGGGA 213972 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||| ||||| | || || || ||| | || | || | | ||| || Sbjct 213971 ATTCCCTCTTTGTCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCGCTCGACTCCACC 213912 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 |||| ||| || ||||| || || |||||||| ||||||||||||||||| Sbjct 213911 TCAAGGGTGATAGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATGAT 213862 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||||||||| | ||||| ||||| || | ||| ||||||||||||||| ||||| | Sbjct 215076 TTCCTCCCCTGAGCCTCAAAACCAGATGCAGGGTAGACTCCTTCTGAATGTTGTAGTCAG 215017 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||| | | | |||| |||| ||||| ||||| ||||| || || |||||||| Sbjct 215016 CCAGGGTCCTCCCATCCTCCAACTGCTTGCCGGCAAAGATGAGACGCTGCTGGTC 214962 >seq1075 Length=42261 Score = 82.4 bits (90), Expect = 5e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||| ||||| || || | || |||| | || ||||| ||||| |||||||| Sbjct 14845 CTCTTTCTGGATGTTGTAATCAGCCAGCGTGCGGCCGTCCTCCAGCTGCTTACCGGCGAA 14786 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||||||| | || | |||||||||||| | || || |||||| | Sbjct 14785 GATGAGGCGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGGATCTTGGCTTTGACAGT 14726 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 | || | || | ||| || || | ||||||||| ||| Sbjct 14725 GTCAATGGTGTCTGATGACTCCACTTCGAGGGTTATGGTTTTT 14683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325685599542866