Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1776 116 3e-21 >seq1776 Length=305386 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| | |||||||| ||||| ||||| || || || || || ||||||||| Sbjct 214091 CCTCCCCTCAGCCTGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATATTGTAATCCGCA 214032 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || || || |||||||| | || | || ||||| || || ||| Sbjct 214031 AGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATAAGCCTCTGCTGGTCAGGGGGA 213972 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||||||||| || ||| || | || || | || | ||||| || || Sbjct 213971 ATTCCCTCTTTGTCCTG-AATCTTGGCCTTCACGTTGTCGATGGTGTCGCTCGACTCCAC 213913 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| ||||| || | ||| || ||||| |||||||| Sbjct 213912 CTCAAGGGTGATAGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 213865 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || ||||||||||| ||||| |||||||| ||||| ||||| || || || Sbjct 216236 CCTCCGCGCAGACGCAGCACCAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGCC 216177 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| || ||||| || |||||||| | ||||| | ||||| || || || Sbjct 216176 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGGTCTGGAGGG 216117 Query 29680 ATACC 29684 || || Sbjct 216116 ATGCC 216112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385210683525774