Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq1813 567 8e-157 >seq1813 Length=181482 Score = 567 bits (628), Expect = 8e-157 Identities = 731/1001 (73%), Gaps = 6/1001 (1%) Strand=Plus/Plus Query 158787 GACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTCTA 158846 || ||||||||| || ||| | || || |||||||| ||||| || | ||| | | Sbjct 117406 GATGACTGGCTTCGTCGTGATAGGTTTGTATTTGTTGGTTGGTCAGGTTTACTTTTGTTC 117465 Query 158847 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGG 158906 || |||||| ||||| |||||||||||||||| || || ||||| | || ||| Sbjct 117466 CCTTGTGCTTACTTTGCTCTTGGCGGTTGGCTTACCGGAACAACTTTTGTAACATCATGG 117525 Query 158907 TATACACATGGACTCGCTACTTCCTATCTTGAGGG-TGCAAACTTTCTTACAGCAGCAGT 158965 ||||| ||||| | || | || || |||||||| ||||| |||| | || || || || Sbjct 117526 TATACTCATGGGTTGGCAAGCTCTTACCTTGAGGGCTGCAA-CTTTTTGACTGCTGCCGT 117584 Query 158966 TTCGACTCCAGCTGAT-GCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTC 159024 || || |||||| | ||| ||| |||||||||| | || ||||| || || |||| Sbjct 117585 GTCAACCCCAGCTAACAGCT-TGGCTCATTCTCTTTTACTATGGTGGGGGCCGGAAGCTC 117643 Query 159025 AAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 159084 |||| ||||| | ||| ||||| || || || |||| |||||| || | || | Sbjct 117644 AAGGAGATTTTACTCGTTGGTGTCAACTAGGTGGTCTTTGGACTTTTGTAGCTTTGCATG 117703 Query 159085 GTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACGTCTCA-TCGGT 159143 |||| |||| | | ||||| |||||||||||||| |||||| |||| || ||| || Sbjct 117704 GTGCTTTTGGCTTGATTGGATTCATGCTTCGCCAATTTGAATTGGCTCG-CTCTGTCCAA 117762 Query 159144 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTC 159203 | || || || || || ||||| || ||||| |||||| | |||||||| || ||| Sbjct 117763 TTACGACCTTATAACGCCATTGCTTTTTCTGGACCTATTTCAGTTTTTGTATCTGTGTTC 117822 Query 159204 CTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCCGCA 159263 | || || || |||||||| || ||||||| || ||||| ||||| || || ||| Sbjct 117823 TTAATTTATCCTCTTGGTCAATCAGGTTGGTTCTTTGCTCCAAGTTTTGGAGTTGCAGCA 117882 Query 159264 ATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACACTAAACCCCTTCCAT 159323 || ||| | ||| | | || | ||||| || || || |||||||| ||||| |||||| Sbjct 117883 ATCTTCCGTTTCATTTTGTTTTTCCAAGGTTTTCATAACTGGACACTTAACCCTTTCCAT 117942 Query 159324 ATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTGCTATTCATGGGGTCACA 159383 |||||||| || |||||| | |||| | || ||||| | ||| |||||||| | || Sbjct 117943 ATGATGGGTGTGGCTGGTGTTTTAGGAGCTGCTCTTCTCTGTGCAATTCATGGCGCAACT 118002 Query 159384 GTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCA 159443 || ||||| || || | || |||||||| || ||||| || || ||| | | Sbjct 118003 GTGGAAAACACTTTGTTTGAAGATGGAGATGGTGCGAACACTTTCCGTGCCTTTAACCCT 118062 Query 159444 ACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTC 159503 || || || || || ||||| ||||| ||||||||||| |||||||| |||||||| Sbjct 118063 ACACAGTCCGAAGAAACATATTCCATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 118122 Query 159504 GGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATG 159563 || ||||| ||||| ||||| || |||||||||||||||||| | ||||| ||||| | | Sbjct 118123 GGTATTGCTTTTTCGAACAAACGATGGCTTCATTTCTTTATGCTTTTTGTTCCTGTAACG 118182 Query 159564 GGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGAT 159623 || || |||| | ||||| | | |||||||||||||||||| | || || ||| Sbjct 118183 GGGCTTTGGATGAGCGCAATTGGTGTAGTAGGTCTTGCTCTCAATCTTAGAGCATATGAT 118242 Query 159624 TTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAAG 159683 || || ||||||||| |||| ||||||||||| ||||||||||| || ||||| || Sbjct 118243 TTTGTATCTCAAGAGATTCGAGCTGCAGAAGATCCTGAATTTGAAACTTTTTACACAAAA 118302 Query 159684 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAA 159743 ||||||||| | ||||| || | || || ||| |||| || ||||| || |||||| Sbjct 118303 AACATTCTTTTAAATGAGGGTATCCGAGCCTGGATGGCCGCTCAAGATCAGCCTCATGAA 118362 Query 159744 AACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784 || | | ||||| || || || |||||| | || ||||| Sbjct 118363 AATCTTGTATTCCCTGAGGAGGTCCTACCACGTGGAAACGC 118403 Score = 504 bits (558), Expect = 8e-138 Identities = 514/668 (77%), Gaps = 2/668 (0%) Strand=Plus/Plus Query 157377 CTATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTATGCGCCCCTGGATCTGTGT 157436 ||| ||||| ||||||||||| ||| | |||||| || ||||| || ||||| ||| Sbjct 72436 CTACATGGGCCGTGAGTGGGAGCTTAGCTTCCGTTTGGGCATGCGTCCTTGGATTGCTGT 72495 Query 157437 TGCCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCA 157496 || ||||| || || || || ||||| | ||||| ||| | |||| ||| | ||||| Sbjct 72496 AGCTTACTCTGCTCCGGTTGCAGCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCA 72555 Query 157497 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTCGT 157556 ||| ||||| |||| |||||||||||| || || || ||||| |||| |||| | || Sbjct 72556 AGGCAGCTTCTCTGATGGTATGCCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGT 72615 Query 157557 CTTCCAGGCAGAGCACAATATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGT 157616 ||||| || |||||||| ||||||||||| || ||||||||||| || || ||||| || Sbjct 72616 GTTCCAAGCTGAGCACAACATTCTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGT 72675 Query 157617 ATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTT-GTTC 157675 || || || ||| |||| ||||||||| || | ||||||||| |||| | | Sbjct 72676 GTTTGGCGGCTCTCTGTTTAGTGCTATGCATGGTTCCTTGGTTACTTCC-AGCTTAATCC 72734 Query 157676 GTGAAACAACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGA 157735 |||| || ||||||| ||||| ||| |||||||||||| |||||||||| || | Sbjct 72735 GTGAGACTACTGAAAACGAGTCTGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAAA 72794 Query 157736 CGTACAACATCGTTGCTGCACACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCAT 157795 | ||||||||||| ||||| ||||||||||| |||||||| || |||||||||||| | Sbjct 72795 CTTACAACATCGTGGCTGCTCACGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGCT 72854 Query 157796 TCAACAACAGCAGAAGTCTTCACTTCTTCCTCGCCGCATGGCCTGTTGTCGGCATCTGGT 157855 |||||||| | | | ||||||||||| || || |||||||| || |||||||||| Sbjct 72855 TCAACAACTCTCGTTCTTTGCACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGGT 72914 Query 157856 TCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGT 157915 | ||||| || || | ||||| ||||| |||||||| |||||||||||||||||||| | Sbjct 72915 TTACTGCTCTTGGTATCAGCACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAAT 72974 Query 157916 CCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTCCTGAACCGCGCTG 157975 | | |||| | || || |||||| | ||||| ||||| || || | ||||| || Sbjct 72975 CTGTGGTTGACAGCCAAGGCCGTGTGATCAACACTTGGGCTGACATCATCAACCGTGCAA 73034 Query 157976 GTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTGGATCTTGCTG 158035 |||||||||||||| ||||| ||||||||||| ||||||||||| || || || ||| Sbjct 73035 ACCTTGGTATGGAAGTGATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTAGCTT 73094 Query 158036 CTGCAGAA 158043 | | |||| Sbjct 73095 CCGTAGAA 73102 Score = 197 bits (218), Expect = 2e-45 Identities = 219/289 (76%), Gaps = 6/289 (2%) Strand=Plus/Minus Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110 |||||||| ||||| || ||| | ||||| | || | |||||||| ||||| || Sbjct 44484 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 44425 Query 157111 ATGATTCCAAC---ATTGCTTGCAGCAACTATCTGCTTCATTGTTGCATTCGTAGCAGCA 157167 ||||| || || |||| |||| | || || || ||| |||| ||| | || || Sbjct 44424 ATGATCCCTACCCTATTGACTGCAAC--CTCCGTGTTT-ATTATTGCCTTCATCGCTGCT 44368 Query 157168 CCTCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAAC 157227 ||||| || || ||||| |||||||| || || ||| |||||||| | ||||||| ||| Sbjct 44367 CCTCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAAC 44308 Query 157228 AACATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCC 157287 ||||||||||||||||| || | ||| | || || || ||||||||||||||||| Sbjct 44307 AACATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCT 44248 Query 157288 ATCTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTT 157336 |||||||| || || || |||||||| |||||||||||||| || |||| Sbjct 44247 ATCTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 44199 Score = 197 bits (218), Expect = 2e-45 Identities = 219/289 (76%), Gaps = 6/289 (2%) Strand=Plus/Plus Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110 |||||||| ||||| || ||| | ||||| | || | |||||||| ||||| || Sbjct 134874 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 134933 Query 157111 ATGATTCCAAC---ATTGCTTGCAGCAACTATCTGCTTCATTGTTGCATTCGTAGCAGCA 157167 ||||| || || |||| |||| | || || || ||| |||| ||| | || || Sbjct 134934 ATGATCCCTACCCTATTGACTGCAAC--CTCCGTGTTT-ATTATTGCCTTCATCGCTGCT 134990 Query 157168 CCTCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAAC 157227 ||||| || || ||||| |||||||| || || ||| |||||||| | ||||||| ||| Sbjct 134991 CCTCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAAC 135050 Query 157228 AACATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCC 157287 ||||||||||||||||| || | ||| | || || || ||||||||||||||||| Sbjct 135051 AACATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCT 135110 Query 157288 ATCTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTT 157336 |||||||| || || || |||||||| |||||||||||||| || |||| Sbjct 135111 ATCTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 135159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545261235921120