Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1541 140 6e-28 >seq1541 Length=115782 Score = 140 bits (154), Expect = 6e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| ||||| || || ||||| || ||||| |||| || |||| || || Sbjct 45006 AGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTATAGTCAGCCAGGGTTCTGCCATCC 45065 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || || || ||||| ||||| || || || || || ||||| ||||||||||| || Sbjct 45066 TCCAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCAGGAGGGATTCCTTCCTTGTCC 45125 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 |||||||| || ||||| || || || || || | | || || |||| || || ||| Sbjct 45126 TGAATCTTGGCCTTTACGTTGTCGATGGTGTCGCTTGACTCCACCTCCAGGGTGATGGTC 45185 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 || || |||| ||||| ||||| |||||||| || Sbjct 45186 TTCCCGGTCAGGGTCTTCACAAAGATCTGCATGAT 45220 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 |||||||| || ||||||||||| || ||||| || ||||| || | || || ||| Sbjct 44381 CCTTCCTTGTCCTGAATCTTTGCCTTCACATTGTCGATCGTGTCGCTGCTCTCCACCTCC 44440 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || |||||||| ||||| ||||| ||||| |||||||| Sbjct 44441 AGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAAATCTGCAT 44484 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 ||||||||||| |||||||| || || || || ||||| ||||| | | || |||||| Sbjct 44886 CCTTCCTTATCCTGAATCTTGGCCTTCACGTTGTCAATGGTATCGCTGGACTCCACTTCC 44945 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || |||||||| || | ||||| ||||| |||||||| Sbjct 44946 AGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 44989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981804380494946