Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1541 123 2e-23 seq1324 116 4e-21 seq1075 114 1e-20 seq1776 111 2e-19 seq965 111 2e-19 seq778 105 6e-18 seq871 102 8e-17 seq889 100 3e-16 seq1424 96.9 3e-15 seq1245 91.5 1e-13 >seq1541 Length=115782 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || || || || ||| || ||||| ||||||||||| Sbjct 45021 GTGGACTCCTTCTGGATGTTATAGTCAGCCAGGGTTCTGCCATCCTCCAGCTGCTTGCCA 45080 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||||| ||||||||| |||||||| ||||||||||| ||||| ||| Sbjct 45081 GCGAAGATGAGCCTCTGCTGGTCAGGAGGGATTCCTTCCTTGTCCTGAATCTTGGCCTTT 45140 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||| | | |||||| || | ||||| ||| || |||||||| || Sbjct 45141 ACGTTGTCGATGGTGTCGCTTGACTCCACCTCCAGGGTGATGGTCTTCCCGGTCAGGGTC 45200 Query 133644 TTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 45201 TTCACAAAGATCTGCATG 45218 >seq1324 Length=68835 Score = 116 bits (128), Expect = 4e-21 Identities = 102/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880 || || ||||| || ||||| || |||||||| || ||| | ||||||||||||||||| Sbjct 20444 GCAATGGAGGCCAGGTTGCAGACAGCCGTCTCCTCAGGGCTGGTGTACTCTACGATCTCG 20503 Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940 | |||||| ||| ||| ||||| ||||| ||||| || |||||||||| |||||| Sbjct 20504 GTGCACAGGTTGGAGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAT 20563 Query 148941 GCGTCCT 148947 ||||||| Sbjct 20564 GCGTCCT 20570 Score = 82.4 bits (90), Expect = 7e-11 Identities = 165/245 (67%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 149328 TTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGA 149387 || || |||| | ||| || | |||||| ||| |||||||| || || ||| Sbjct 21585 TTGAAGACTCTGAGCATTGGGACGATGCCATTGGATGTGCCGTTTGTGCCGCGGATGTAG 21644 Query 149388 CTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATG 149447 |||| | || || | ||||| | | | ||||||||||| || ||| |||| Sbjct 21645 CTGCTGGTGGCGCGGATGTTGTGGATGGACAGTCCGATGCCGCCTGCGCTCTTGCTGATG 21704 Query 149448 GCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGC 149507 |||| || || ||| || ||||||||||||||||||||| ||||||| || | Sbjct 21705 CCCGCACACTCCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCTTCATGCACACC 21764 Query 149508 AGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCG 149567 || ||||| || | ||||| | | |||||||| ||| | ||||||| |||| Sbjct 21765 AGGAAGCAGCTGCTGAGCTGCGGCCGAGGGGTGCCGGCGTTGAAGAGGGTGGGGGAGGCG 21824 Query 149568 TGTGT 149572 || || Sbjct 21825 TGGGT 21829 >seq1075 Length=42261 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || ||||||||||| || |||||||| ||| |||| |||||| ||| Sbjct 14859 AAATGGAGAGTAGACTCTTTCTGGATGTTGTAATCAGCCAGCGTGCGGCCGTCCTCCAGC 14800 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | ||||| ||||||||||| || || || || |||||||| |||| Sbjct 14799 TGCTTACCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGGATC 14740 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || |||| |||| ||||| | | |||||| |||| ||| | |||||| | Sbjct 14739 TTGGCTTTGACAGTGTCAATGGTGTCTGATGACTCCACTTCGAGGGTTATGGTTTTTGCT 14680 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || |||||||| ||||| Sbjct 14679 GTCAATGTACGAACGAAAATTTGCAT 14654 >seq1776 Length=305386 Score = 111 bits (122), Expect = 2e-19 Identities = 147/201 (73%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTTG 133520 |||||||| ||||| ||||||||||| | | || || | | ||||| ||||||||| Sbjct 214061 GTGGACTCCTTCTGGATATTGTAATCCGCAAGGGTCCTG--CCA-TCCTCCAGCTGCTTG 214005 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || |||| ||||||||| || || || || || ||||| ||||| | Sbjct 214004 CCAGCGAAGATAAGCCTCTGCTGGTCAGGGGGAATTCCCTCTTTGTCCTGAATCTTGGCC 213945 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | |||||| | | |||||| || | ||||| || ||||||||||| Sbjct 213944 TTCACGTTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAGG 213885 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || || || ||||||||| Sbjct 213884 GTCTTCACAAAGATCTGCATG 213864 Score = 82.4 bits (90), Expect = 7e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| || ||||| || ||| ||| | |||||||||||| Sbjct 215619 ATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGCCCGTCCTCGAGCTG 215560 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCT 133559 ||| || || |||| |||||||||||||| ||||| || ||| Sbjct 215559 CTTCCCAGCAAAAATCAGCCGCTGCTGGTCAGGAGGAATACCT 215517 Score = 82.4 bits (90), Expect = 7e-11 Identities = 78/97 (80%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || || || || ||||| || ||| ||| ||| |||||||||||||||||| Sbjct 216206 GTGGATTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGACC-GTCCTCGAGCTGCTTGCC 216148 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCT 133559 ||| |||| | ||||||||||| |||||||||||| Sbjct 216147 AGCGAAAATCAAACGCTGCTGGTCTGGAGGGATGCCT 216111 >seq965 Length=28847 Score = 111 bits (122), Expect = 2e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 149079 CCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCC 149138 || ||||| ||| ||| |||||| ||||| ||| | || ||||||| ||||||| Sbjct 1477 CCATAGCAGTCGGGGAGGCCGGGGGCCTTGTTGGGGTCGAACAGGGACCACATGCCGTCC 1536 Query 149139 GCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGC-GCGC 149197 | | ||| ||||| || |||||||| ||||||||||| ||| | |||||| | || | Sbjct 1537 TCCTCCACCCGCTTGATGAACAGATCCGGCACCCAGAGGGCGGTGAAGAGGTCTCTGCAC 1596 Query 149198 CTTGCA-GTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGT 149256 || || || || ||| |||| |||||| | ||| | | ||| || || |||| Sbjct 1597 CT--CATCTCCTCTTTGCCGCTGTTCTTGCGCAGCTCGAGGAAGTCGAAGATATCAGCGT 1654 Query 149257 GCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTGCCGCCCTG 149305 |||||||||| | ||| | | || | |||||| ||||| || ||||| Sbjct 1655 GCCACGGCTCCAGGTAGATTGTGATGGAGCCCTTCCGCTTCCCCCCCTG 1703 >seq778 Length=18768 Score = 105 bits (116), Expect = 6e-18 Identities = 158/220 (72%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 120635 AGTACAGG---CACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGC 120691 |||||||| || || ||| |||| || || | || || ||||| || |||||||| Sbjct 14405 AGTACAGGTGGCATGCGAAGGCCGTATGTAGCGCTTCATCTCGCGAGATGAGCTCGTTCG 14464 Query 120692 TAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGC 120751 |||||| || || || | ||||| || |||| | ||||||||||| |||||| Sbjct 14465 AAAACGTGAGTCCAGGAAGCATGCCCCTCTTCTTCAGCCAGAATATGGCGCAAAAGCTCG 14524 Query 120752 CCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCG 120811 |||||||||| | ||| |||||| ||| || |||| || ||| ||| || ||| | Sbjct 14525 CCGAAAAGAAGATGCCTTCCACGCAGGCGAAAGCGATCAGCCGCGTGGCGAAGCTCG-AG 14583 Query 120812 TCTTGCTGTCGATCCACTTCATGGCCCACTCGGCCTTTTT 120851 || | || |||| |||||| |||||||| ||||| || Sbjct 14584 TCCT-CT-CCGATGTACTTCAGGGCCCACTGTGCCTTCTT 14621 >seq871 Length=23497 Score = 102 bits (112), Expect = 8e-17 Identities = 144/199 (72%), Gaps = 5/199 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACG--AGTCCTCGAGCTGCTTGC 133521 || ||||||||||| || ||||| || ||| | | ||| |||||| |||||||||| Sbjct 11309 GTAGACTCTTTCTGGATGTTGTAGTCAGCCA--GCGAACGGCCGTCCTCCAGCTGCTTGC 11366 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 |||| || ||||| ||||| || || || || || || |||||||| |||||| | Sbjct 11367 CCGC-TAGATGAGGCGCTGTTGTTCTGGGGGAATCCCCTCCTTGTCCTGGATCTTGGCTT 11425 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| | | ||| || || | ||||| |||||| | |||| | Sbjct 11426 TGACATTCTCAATGGTGTCTGACGACTCAACTTCCAGGGTGATGGTTTTACATGTCAACG 11485 Query 133642 TTTTTACGAAAATCTGCAT 133660 | |||| ||||||||| Sbjct 11486 TACGAACGAGAATCTGCAT 11504 >seq889 Length=25719 Score = 100 bits (110), Expect = 3e-16 Identities = 178/260 (68%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 149058 TACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCAC 149117 ||||||| | |||| | |||||| | ||| |||| ||| | | || |||||| Sbjct 5178 TACAGCCTCACGAAGTCGTCGCCGCACGCGTCGGCGAGCCCGCGCGCGTCGTTGGGGCAC 5119 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 ||||| ||||| | |||| || ||| ||| | | || ||||||||||| ||| Sbjct 5118 ATGAGGGACCAGTCCTCGTCGGCCAGCACCCGCCTGAAGAAGTCGTCGGGCACCCACAGC 5059 Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGC 149237 || | ||||||||||||| || || | ||| ||| ||| | || || Sbjct 5058 GCCGTGAAGAGGTCGCGCGCCCGCGCCTCCTCCACCCCCGCGTTCTTGCGGATGTCCAGG 4999 Query 149238 ACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG 149297 | ||| ||||| |||||||| ||||| ||| |||| || | ||||||||||||| | Sbjct 4998 AACTCGAAGATGTCGGCGTGCCAGGGCTCCATGAACACGGCCACCGCGCCCTTGCGCACG 4939 Query 149298 CCGCCCTGGTCGACGTGGCG 149317 || |||| || |||||||| Sbjct 4938 CCCGCCTGATCCACGTGGCG 4919 >seq1424 Length=89163 Score = 96.9 bits (106), Expect = 3e-15 Identities = 117/159 (74%), Gaps = 3/159 (2%) Strand=Plus/Minus Query 120635 AGTACAGG---CACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGC 120691 |||||||| || || ||| ||||||| || ||||||| ||||| ||||||||||| Sbjct 47037 AGTACAGGTGGCAGGCGAAGGCCGTGTGTAGCGCCTCGTCCCGCGAGATCAGCTCGTTAG 46978 Query 120692 TAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGC 120751 ||||| || || || | ||||| || |||||| |||| |||||| |||||| Sbjct 46977 AGAACGTGAGCCCCGGGAGCATGCCCCTCTTCTTGAGCCAGAAGATGGCGCAGAAGCTGG 46918 Query 120752 CCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACCA 120790 | || ||||| | |||||||||| || || || |||| Sbjct 46917 CGGAGAAGAAGATGCCCTCCACGCACGCGAACGCTACCA 46879 >seq1245 Length=60194 Score = 91.5 bits (100), Expect = 1e-13 Identities = 317/485 (65%), Gaps = 20/485 (4%) Strand=Plus/Plus Query 120371 TCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAACGGGTTGC 120430 ||||||| ||||||| ||| || || | || || || |||||| ||| |||||| Sbjct 44272 TCTCAAAGAAGTTTGCTTTTCCATCGAGCGCGATCAGGTCCATAAAACTGAAAGGGTTGG 44331 Query 120431 TCGCGTTAAAGTATTTCGGCTGG---CCCAACTGTACGAGCAGTCGGTCCGCTACAAACT 120487 | | | |||| | | || | |||| ||| | || | ||| || ||||||| Sbjct 44332 TGGTGCC---GTATATTGCCTCGTACCCCAGCTGCTGGCAGAGCCTGTCTGCAACAAACT 44388 Query 120488 CAATGTACTCGCACAT---GGACTGCGCGTTCATGCCCAGCA-ACGCCACCGGCAACGCC 120543 |||||||||| |||| ||| || || || || | | || || || | |||| Sbjct 44389 CAATGTACTCCGACATCAGGGAA---GCATTGATTCCAATAAGACTGCAG-GGTAGCGCC 44444 Query 120544 GACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAGCATAGTGTGG 120603 || ||| ||| |||||| | ||| || || ||| ||| | || || || Sbjct 44445 TCACAGATAAAAGCCTGCTCAATCTTCACAGCATCAGTGACAATGTCCCTCACGGTCTGA 44504 Query 120604 CCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAGTCCGTGTGCAGG 120663 | |||| ||| | | || | | ||| ||| | ||||||| ||||| |||||||| Sbjct 44505 GCTGGCAGCTTCTCCTGGAGGGTC--TCG-TAGAGCTGGCACGCGAAGTCGGTGTGCAGC 44561 Query 120664 CCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTC 120723 ||||| ||||| || ||||| ||| ||| ||||||||||||| || | || Sbjct 44562 CCCTCATCGCGGCTGATGAGCTCATTGGCAAAACAAAGGCCGGGCATGAGTCCCCGCTTC 44621 Query 120724 TTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAG 120783 || | |||| |||||| || ||||| ||| | ||||||||| |||||| Sbjct 44622 TTCAGCCAGAAGATGGCGCAGAATGACCCCGAGAAGTGGATACCCTCCACGCATGCAAAG 44681 Query 120784 GCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTTCATGGCCCACTCG 120843 || || | | ||| | |||| ||||| || ||||||||||| | ||||| || Sbjct 44682 GCAACGAGCCTCTCTCCAAACG--ACCGTC-CGCGCTCGATCCACTTGGTTGCCCAGTCC 44738 Query 120844 GCCTT 120848 ||||| Sbjct 44739 GCCTT 44743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483409838433360