Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq1813 493 4e-135 >seq1813 Length=181482 Score = 493 bits (546), Expect = 4e-135 Identities = 511/662 (77%), Gaps = 12/662 (2%) Strand=Plus/Plus Query 19832 TACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTT 19891 |||||||| || |||||||| ||||||| || | || ||| | ||||||||| ||| Sbjct 72437 TACATGGGCCGTGAGTGGGAGCTTAGCTTCCGTTTGGGCATGCGTCCTTGGATTGCTGTA 72496 Query 19892 GCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCGTCTACCCGTTTGGTCAG 19951 || |||||||||||||||||||| || | || || || | ||||||| ||||||| Sbjct 72497 GCTTACTCTGCTCCGGTTGCAGCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCAA 72556 Query 19952 GGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTA 20011 || |||||||| |||| ||||||| | || || || || || ||||||| ||| | || Sbjct 72557 GGCAGCTTCTCTGATGGTATGCCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGTG 72616 Query 20012 TTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTA 20071 |||||||| || || |||||||| |||||||| ||||||||||||||||||||||| || Sbjct 72617 TTCCAAGCTGAGCACAACATTCTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGTG 72676 Query 20072 TTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTT-GTGCG 20130 || || || || || || ||||| ||||| ||||| | ||||| ||| |||| | || Sbjct 72677 TTTGGCGGCTCTCTGTTTAGTGCTATGCATGGTTCCTTGGTTACTTCC-AGCTTAATCCG 72735 Query 20131 TGAGACTACTGAACAGGAAAGTCAG--AACTATGGTTACAAGTTTGGGCAAGAAGAAGAG 20188 ||||||||||||| | | |||| | ||| ||||||||||||||| ||||||| || Sbjct 72736 TGAGACTACTGAAAACG--AGTCTGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAA 72793 Query 20189 ACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCT 20248 || || |||||||| || ||||| ||||||||||| || | || |||||||||||| Sbjct 72794 ACTTACAACATCGTGGCTGCTCACGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGC 72853 Query 20249 TTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGG 20308 |||||||| |||||| | ||||||||||| ||||| ||||| || ||||| || ||| Sbjct 72854 TTCAACAACTCTCGTTCTTTGCACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGG 72913 Query 20309 TTCGCTGC-CTTGGGCGTTTC--TACAATGGCGTTTAATCTGAACGGTTTCAACTTTAAC 20365 || |||| |||| || || || |||||||| || || |||||||||||||| ||| Sbjct 72914 TTTACTGCTCTTG---GTATCAGCACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 72970 Query 20366 CAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGT 20425 || || | | |||| | | || ||||| || | |||||||||||||| |||| ||| Sbjct 72971 CAATCTGTGGTTGACAGCCAAGGCCGTGTGATCAACACTTGGGCTGACATCATCAACCGT 73030 Query 20426 GCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTT 20485 || || || || | || |||||||| || || || ||||| |||||||| |||||||| Sbjct 73031 GCAAACCTTGGTATGGAAGTGATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTA 73090 Query 20486 GC 20487 || Sbjct 73091 GC 73092 Score = 125 bits (138), Expect = 2e-24 Identities = 182/257 (71%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591 ||||| ||||| | || |||||||| || ||||| || || | | || ||| Sbjct 44457 AACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATCCCTACCCTATTGACTGCAACC 44398 Query 19592 ATCTGCTTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAA 19651 | || |||||||| ||||| || ||||| || || ||||| ||||| || || || Sbjct 44397 TCCGTGTTTATTATTGCCTTCATCGCTGCTCCTCCTGTGGACATCGATGGTATTCGTGAG 44338 Query 19652 CCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAGC 19711 || || || ||| | || ||||| ||||||||||| || || || | | || | | Sbjct 44337 CCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATCTCTGGTGCTATTATCCCTACC 44278 Query 19712 AGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGG 19771 |||||| || || ||||||||||| || ||||| ||| ||| |||||||||||| Sbjct 44277 TCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAGGCTGCTTCCCTTGATGAATGG 44218 Query 19772 CTCTACAACGGGGGACC 19788 || |||||||| || || Sbjct 44217 CTTTACAACGGCGGCCC 44201 Score = 125 bits (138), Expect = 2e-24 Identities = 182/257 (71%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591 ||||| ||||| | || |||||||| || ||||| || || | | || ||| Sbjct 134901 AACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATCCCTACCCTATTGACTGCAACC 134960 Query 19592 ATCTGCTTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAA 19651 | || |||||||| ||||| || ||||| || || ||||| ||||| || || || Sbjct 134961 TCCGTGTTTATTATTGCCTTCATCGCTGCTCCTCCTGTGGACATCGATGGTATTCGTGAG 135020 Query 19652 CCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAGC 19711 || || || ||| | || ||||| ||||||||||| || || || | | || | | Sbjct 135021 CCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATCTCTGGTGCTATTATCCCTACC 135080 Query 19712 AGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGG 19771 |||||| || || ||||||||||| || ||||| ||| ||| |||||||||||| Sbjct 135081 TCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAGGCTGCTTCCCTTGATGAATGG 135140 Query 19772 CTCTACAACGGGGGACC 19788 || |||||||| || || Sbjct 135141 CTTTACAACGGCGGCCC 135157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148825594041612