Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq1813 452 1e-122 >seq1813 Length=181482 Score = 452 bits (500), Expect = 1e-122 Identities = 522/693 (75%), Gaps = 20/693 (3%) Strand=Plus/Plus Query 28934 TCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCG 28991 |||||||||| | || || || |||| ||||||| || |||||||| ||||||| || Sbjct 72411 TCCACTTCCTATTGGGTGTGGCT-TGCT-ACATGGGCCGTGAGTGGGAGCTTAGCTTCCG 72468 Query 28992 ACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGC 29051 | || ||| | || |||||| ||| || ||||| ||||| || ||||| || | || Sbjct 72469 TTTGGGCATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCGGTTGCAGCTGCTACCGC 72528 Query 29052 GGTTTTCCTCGTCTACCCATTCGGTCAAGG----TTCTTTTAGCGACGCGATGCCTTTGG 29107 || ||| | ||||||| | |||||||| |||| | || | |||||| | | Sbjct 72529 AGTGTTCTTGATCTACCCTATTGGTCAAGGCAGCTTCTCT----GATGGTATGCCTCTTG 72584 Query 29108 GTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGC 29167 | ||||| ||||| ||||||| ||| | ||||||||||| || || |||||||| |||| Sbjct 72585 GCATTTCCGGCACTTTCAACTTTATGATTGTGTTCCAAGCTGAGCACAACATTCTTATGC 72644 Query 29168 ACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGC 29227 |||| ||||||||||| || || ||||| ||||| || ||||| || |||||||| |||| Sbjct 72645 ACCCTTTCCACATGCTTGGTGTGGCTGGCGTGTTTGGCGGCTCTCTGTTTAGTGCTATGC 72704 Query 29228 ACGGTTCGCTTGTCACGTCCTCGCTT-GTGCGTGAGACGACTGAAGACATCTCTCAGAAC 29286 | ||||| | || || ||| |||| | |||||||| |||||| || ||| ||| Sbjct 72705 ATGGTTCCTTGGTTACTTCC-AGCTTAATCCGTGAGACTACTGAAAACGAGTCTGCTAAC 72763 Query 29287 TATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTAC 29346 ||||||||||||||| ||||||| || ||||| |||||||| || |||||||||||| Sbjct 72764 GCTGGTTACAAGTTTGGTCAAGAAGGTGAAACTTACAACATCGTGGCTGCTCACGGTTAC 72823 Query 29347 TTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTC 29406 ||||| || | || |||||||| ||| ||||| || |||||| | ||||||||| Sbjct 72824 TTTGGTCGCCTAATTTTCCAATACGCTAGCTTCAACAACTCTCGTTCTTTGCACTTCTTC 72883 Query 29407 CTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGC-CTTGGGCGTTTC--TACAATG 29463 || ||||| ||||| || ||||| || ||||| |||| |||| || || || ||| Sbjct 72884 CTAGCTGCTTGGCCTGTAGTAGGCATCTGGTTTACTGCTCTTG---GTATCAGCACTATG 72940 Query 29464 GCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTC 29523 ||||| || || |||||||| ||||| ||||| || | | |||| | | || ||||| Sbjct 72941 GCGTTCAACCTTAACGGTTTCAACTTCAACCAATCTGTGGTTGACAGCCAAGGCCGTGTG 73000 Query 29524 ATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAG 29583 || || ||||||||||| | |||| || || ||||| || | ||||| ||||| ||| Sbjct 73001 ATCAACACTTGGGCTGACATCATCAACCGTGCAAACCTTGGTATGGAAGTGATGCACGAG 73060 Query 29584 CGTAATGCTCATAACTTCCCACTTGATCTGGCT 29616 ||||| ||||| |||||||| ||||| || ||| Sbjct 73061 CGTAACGCTCACAACTTCCCTCTTGACCTAGCT 73093 Score = 125 bits (138), Expect = 2e-24 Identities = 182/257 (71%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||| ||||| | || |||||||| || ||||| || || | | || ||| Sbjct 44457 AACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATCCCTACCCTATTGACTGCAACC 44398 Query 28720 ATCTGCTTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAA 28779 | || |||||||| ||||| || || || || || ||||| ||||| || || || Sbjct 44397 TCCGTGTTTATTATTGCCTTCATCGCTGCTCCTCCTGTGGACATCGATGGTATTCGTGAG 44338 Query 28780 CCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAGC 28839 ||||| |||| | | || ||||| ||||||||||| || || || | | || | | Sbjct 44337 CCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATCTCTGGTGCTATTATCCCTACC 44278 Query 28840 AGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGG 28899 |||||| || || ||||||||||| || ||||| ||| ||| |||||||||||| Sbjct 44277 TCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAGGCTGCTTCCCTTGATGAATGG 44218 Query 28900 CTCTACAACGGGGGACC 28916 || |||||||| || || Sbjct 44217 CTTTACAACGGCGGCCC 44201 Score = 125 bits (138), Expect = 2e-24 Identities = 182/257 (71%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||| ||||| | || |||||||| || ||||| || || | | || ||| Sbjct 134901 AACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATCCCTACCCTATTGACTGCAACC 134960 Query 28720 ATCTGCTTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAA 28779 | || |||||||| ||||| || || || || || ||||| ||||| || || || Sbjct 134961 TCCGTGTTTATTATTGCCTTCATCGCTGCTCCTCCTGTGGACATCGATGGTATTCGTGAG 135020 Query 28780 CCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAGC 28839 ||||| |||| | | || ||||| ||||||||||| || || || | | || | | Sbjct 135021 CCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATCTCTGGTGCTATTATCCCTACC 135080 Query 28840 AGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGG 28899 |||||| || || ||||||||||| || ||||| ||| ||| |||||||||||| Sbjct 135081 TCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAGGCTGCTTCCCTTGATGAATGG 135140 Query 28900 CTCTACAACGGGGGACC 28916 || |||||||| || || Sbjct 135141 CTTTACAACGGCGGCCC 135157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146662440639644