Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq1813 473 3e-129 >seq1813 Length=181482 Score = 473 bits (524), Expect = 3e-129 Identities = 516/679 (76%), Gaps = 6/679 (1%) Strand=Plus/Plus Query 19025 TCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCG 19082 |||||||||| | || || || |||| ||||||| || |||||||| ||||||| || Sbjct 72411 TCCACTTCCTATTGGGTGTGGCT-TGCT-ACATGGGCCGTGAGTGGGAGCTTAGCTTCCG 72468 Query 19083 ACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGC 19142 | || ||||| ||||||||| ||| || ||||| ||||| ||||| || || | || Sbjct 72469 TTTGGGCATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCGGTTGCAGCTGCTACCGC 72528 Query 19143 GGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTAT 19202 || ||| | |||| || |||||||||| ||| || | ||||||| | || || Sbjct 72529 AGTGTTCTTGATCTACCCTATTGGTCAAGGCAGCTTCTCTGATGGTATGCCTCTTGGCAT 72588 Query 19203 TAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCC 19262 | || || ||||||| ||| |||| ||||| ||||| || ||||| || |||||||| Sbjct 72589 TTCCGGCACTTTCAACTTTATGATTGTGTTCCAAGCTGAGCACAACATTCTTATGCACCC 72648 Query 19263 GTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGG 19322 ||||||||||| ||||| ||||| ||||| ||||| || || |||||||| ||||| || Sbjct 72649 TTTCCACATGCTTGGTGTGGCTGGCGTGTTTGGCGGCTCTCTGTTTAGTGCTATGCATGG 72708 Query 19323 TTCGCTTGTTACGTCCTCGCTT-GTGCGTGAAACTACTGAAGAGGTATCTCAGAACTATG 19381 ||| | ||||| ||| |||| | ||||| ||||||||| | | ||| ||| || Sbjct 72709 TTCCTTGGTTACTTCC-AGCTTAATCCGTGAGACTACTGAAAACGAGTCTGCTAACGCTG 72767 Query 19382 GCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTG 19441 | ||||||||||| ||||||| || ||||| ||||| || |||||||| || || |||| Sbjct 72768 GTTACAAGTTTGGTCAAGAAGGTGAAACTTACAACATCGTGGCTGCTCACGGTTACTTTG 72827 Query 19442 GTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGG 19501 |||| || |||||||| ||||| ||||||||| |||||| | || ||||| | | Sbjct 72828 GTCGCCTAATTTTCCAATACGCTAGCTTCAACAACTCTCGTTCTTTGCACTTCTTCCTAG 72887 Query 19502 CTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCA 19561 ||||||||||||| || ||||| |||||| | || ||||| | ||||| ||||| |||| Sbjct 72888 CTGCTTGGCCTGTAGTAGGCATCTGGTTTACTGCTCTTGGTATCAGCACTATGGCGTTCA 72947 Query 19562 ACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATA 19621 || | || || || ||||| ||||| || | |||||| | | || ||||| || | | Sbjct 72948 ACCTTAACGGTTTCAACTTCAACCAATCTGTGGTTGACAGCCAAGGCCGTGTGATCAACA 73007 Query 19622 CTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATG 19681 ||||||||||||| |||| ||||| ||||| || | || || |||||||| ||||| | Sbjct 73008 CTTGGGCTGACATCATCAACCGTGCAAACCTTGGTATGGAAGTGATGCACGAGCGTAACG 73067 Query 19682 CTCATAACTTCCCACTTGA 19700 |||| |||||||| ||||| Sbjct 73068 CTCACAACTTCCCTCTTGA 73086 Score = 174 bits (192), Expect = 4e-39 Identities = 211/285 (74%), Gaps = 2/285 (1%) Strand=Plus/Minus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || || || ||||| ||||| || || ||||| ||||| ||||| |||||||| || Sbjct 44484 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 44425 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTAC-TATTTGTTTCATTATTGCCTTCATTGCTGCACC 18842 ||||| || || | | || || | ||||| |||||||||||||| ||||| || Sbjct 44424 ATGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCC 44366 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 |||||| ||||| ||||| || || ||||||||| | || | | || ||||| ||||| Sbjct 44365 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 44306 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAAT 18962 |||||| || || || | | || | | |||||| || || ||||||||||| || Sbjct 44305 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 44246 Query 18963 TTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACC 19007 ||||| ||| ||| |||||||||||||| |||||||| || || Sbjct 44245 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCC 44201 Score = 174 bits (192), Expect = 4e-39 Identities = 211/285 (74%), Gaps = 2/285 (1%) Strand=Plus/Plus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || || || ||||| ||||| || || ||||| ||||| ||||| |||||||| || Sbjct 134874 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 134933 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTAC-TATTTGTTTCATTATTGCCTTCATTGCTGCACC 18842 ||||| || || | | || || | ||||| |||||||||||||| ||||| || Sbjct 134934 ATGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCC 134992 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 |||||| ||||| ||||| || || ||||||||| | || | | || ||||| ||||| Sbjct 134993 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 135052 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAAT 18962 |||||| || || || | | || | | |||||| || || ||||||||||| || Sbjct 135053 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 135112 Query 18963 TTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACC 19007 ||||| ||| ||| |||||||||||||| |||||||| || || Sbjct 135113 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCC 135157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141145759478412