Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1770 129 7e-25 >seq1770 Length=296915 Score = 129 bits (142), Expect = 7e-25 Identities = 159/215 (74%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 147114 CTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGC 147173 |||||| | ||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 92413 CTGGCAGAACATGTGGCACGGCGGCAGCGCCATCAGCTGCAGATCCGCGGGGTTCCAGGC 92472 Query 147174 CGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAG 147233 || | | ||||| | |||||| || |||| ||| | ||| | | ||| Sbjct 92473 GGACAATATGAGCCGTCGATCCTCGGGCTTGGTCTTGATCCTGTGGATGAGATCCGCCAG 92532 Query 147234 CTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGT 147292 ||||||||||||||| || ||||| | | ||| |||| ||| |||| || |||| Sbjct 92533 CTGGTCCACGCCCTGCCCGGTGTAGTCCG-CGTGCATGTCCGTGTATTTGGCGCCGAAGT 92591 Query 147293 GCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCG 147327 | | ||||||||| |||||||| || ||||||||| Sbjct 92592 GGCGCCACTGGAAACCGTACACGGGACCCAGGTCG 92626 Score = 113 bits (124), Expect = 5e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 146995 ACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGG 147054 || || || | |||| ||||||||| |||||| || |||||||| || || || ||| Sbjct 91563 ACTTGCGCGATCATGAGGGTGAGCAGGGAGTAGGACGCGATGTTGAACGGCACGCCGAGG 91622 Query 147055 CCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAAC 147114 |||||||| | ||||| |||||||| ||||||||| ||||| || || |||||||| ||| Sbjct 91623 CCCATGTCGCACGACCGCTGGTACATCTGGCACGACAGCTCGCCATCCGCCACGTAGAAC 91682 Query 147115 TG 147116 || Sbjct 91683 TG 91684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583474769409600