Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq1813 603 1e-167 >seq1813 Length=181482 Score = 603 bits (668), Expect = 1e-167 Identities = 743/1005 (74%), Gaps = 8/1005 (1%) Strand=Plus/Plus Query 159391 GATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTCTT 159450 |||||||||||| || ||| | ||||| ||||| |||||||| || | || || || Sbjct 117406 GATGACTGGCTTCGTCGTGATAGGTTTGTATTTGTTGGTTGGTCAGGTTTACTT-TTGTT 117464 Query 159451 CCCAC-TGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTTATCACGAGTTG 159509 ||| |||||| | || |||||||||||||||| || || |||||| | || || Sbjct 117465 CCCTTGTGCTTACTTTGCTCTTGGCGGTTGGCTTACCGGAACAACTTTTGTAACATCATG 117524 Query 159510 GTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGG-TGCTAATTTTCTCACGGCAGCTG 159568 ||| || || || | || || || |||||||| || ||| | |||| | || || || | Sbjct 117525 GTATACTCATGGGTTGGCAAGCTCTTACCTTGAGGGCTGCAACTTTT-TGACTGCTGCCG 117583 Query 159569 TCTCAACGCCTGCTGAT-GCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 159627 | ||||| || ||| | ||| ||| |||||||||| | ||| ||||| || || || Sbjct 117584 TGTCAACCCCAGCTAACAGCT-TGGCTCATTCTCTTTTACTATGGTGGGGGCCGGAAGCT 117642 Query 159628 CAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTTGCTCTCCAC 159687 ||||| || || || ||||| ||||| || || ||||| | ||||| ||| | || Sbjct 117643 CAAGGAGATTTTACTCGTTGGTGTCAACTAGGTGGTCTTTGGACTTTTGTAGCTTTGCAT 117702 Query 159688 GGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG-TCTAGTTGG 159746 ||||| || | | || || || ||||| || ||||||||| | ||||| ||| || Sbjct 117703 GGTGCTTTTGGCTTGATTGGATTCATGCTTCGCCAATTTGAATTGGCTCGCTCT-GTCCA 117761 Query 159747 TATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTATT 159806 | || ||||| || || ||||| || ||||| |||||| | |||||||| || || Sbjct 117762 ATTACGACCTTATAACGCCATTGCTTTTTCTGGACCTATTTCAGTTTTTGTATCTGTGTT 117821 Query 159807 CCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGC 159866 | | || ||||| || ||||| || ||||||||||| || ||||| || || ||||| Sbjct 117822 CTTAATTTATCCTCTTGGTCAATCAGGTTGGTTCTTTGCTCCAAGTTTTGGAGTTGCAGC 117881 Query 159867 AATCTTTAGATTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCA 159926 |||||| | ||| | ||||| | || ||||| || |||||||| || ||||| ||||| Sbjct 117882 AATCTTCCGTTTCATTTTGTTTTTCCAAGGTTTTCATAACTGGACACTTAACCCTTTCCA 117941 Query 159927 TATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAATCCATGGTGCTAC 159986 ||||||||| || |||||| | |||| | || || | |||||||| ||||| || || Sbjct 117942 TATGATGGGTGTGGCTGGTGTTTTAGGAGCTGCTCTTCTCTGTGCAATTCATGGCGCAAC 118001 Query 159987 TGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAAGGCGTTTGAGCC 160046 ||| || ||||| ||||||||||||||||| || ||||| || || ||| | || Sbjct 118002 TGTGGAAAACACTTTGTTTGAAGATGGAGATGGTGCGAACACTTTCCGTGCCTTTAACCC 118061 Query 160047 TACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 160106 ||| || ||||| || ||||| ||||| ||||||||||| |||||||| |||||||| Sbjct 118062 TACACAGTCCGAAGAAACATATTCCATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTT 118121 Query 160107 CGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTAT 160166 ||| |||| ||||| ||||| || ||||||||||| || ||| | ||||| ||||| | Sbjct 118122 TGGTATTGCTTTTTCGAACAAACGATGGCTTCATTTCTTTATGCTTTTTGTTCCTGTAAC 118181 Query 160167 GGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCTTCGTGCTTACGA 160226 ||| || |||| | | ||||| | | ||||||||| |||| ||| | || || || Sbjct 118182 GGGGCTTTGGATGAGCGCAATTGGTGTAGTAGGTCTTGCTCTCAATCTTAGAGCATATGA 118241 Query 160227 TTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGACCTTCTACACCAA 160286 ||| || ||| |||||| |||| |||||||||||||||||||| || || ||||| || Sbjct 118242 TTTTGTATCTCAAGAGATTCGAGCTGCAGAAGATCCTGAATTTGAAACTTTTTACACAAA 118301 Query 160287 GAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGATCAACCACATGA 160346 ||||| || || ||||| || | || || |||||||| || ||||| || ||||| Sbjct 118302 AAACATTCTTTTAAATGAGGGTATCCGAGCCTGGATGGCCGCTCAAGATCAGCCTCATGA 118361 Query 160347 AAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391 ||| || | ||||||||||| || ||||| | || ||||| || Sbjct 118362 AAATCTTGTATTCCCTGAGGAGGTCCTACCACGTGGAAACGCTCT 118406 Score = 495 bits (548), Expect = 4e-135 Identities = 507/660 (77%), Gaps = 4/660 (1%) Strand=Plus/Plus Query 158002 CTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTATGCGCCCATGGATCTGTGT 158061 ||| ||||| ||||||||||| || | |||||| || ||||| || ||||| ||| Sbjct 72436 CTACATGGGCCGTGAGTGGGAGCTTAGCTTCCGTTTGGGCATGCGTCCTTGGATTGCTGT 72495 Query 158062 AGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTCTATCCTTTCGGTCA 158121 ||| || |||||||| || || || || | ||||| ||| | |||| ||| | ||||| Sbjct 72496 AGCTTACTCTGCTCCGGTTGCAGCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCA 72555 Query 158122 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 158181 ||| ||||| |||| |||||||||||| || || || ||||| |||| ||| |||| Sbjct 72556 AGGCAGCTTCTCTGATGGTATGCCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGT 72615 Query 158182 ATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGT 158241 |||||||| || |||||||| ||||||||||| ||||| ||||| ||||| ||||| || Sbjct 72616 GTTCCAAGCTGAGCACAACATTCTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGT 72675 Query 158242 ATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCG 158301 || || || ||||| || |||||||||||| | ||||||||| | | || Sbjct 72676 GTTTGGCGGCTCTCTGTTTAGTGCTATGCATGGTTCCTTGGTTACTTCCAGCTTAATCCG 72735 Query 158302 TGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAAGAAGAGAC 158361 ||| || ||||||| ||||| ||| ||||| ||||| |||||||||| || || Sbjct 72736 TGAGACTACTGAAAACGAGTCTGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAAAC 72795 Query 158362 CTACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATT 158421 ||||||||||| || || || || ||||| ||||| | || |||||||||||| || Sbjct 72796 TTACAACATCGTGGCTGCTCACGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGCTT 72855 Query 158422 CAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTT 158481 ||||||||| ||||| |||||||||||||| ||||| |||||||| || ||||||||||| Sbjct 72856 CAACAACTCTCGTTCTTTGCACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGGTT 72915 Query 158482 CACCGCCCTTGGCGTGTCA--ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 158539 || || |||| || ||| || ||||| |||||||| |||||||||||||||||||| Sbjct 72916 TACTGCTCTTG--GTATCAGCACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAA 72973 Query 158540 TCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCT 158599 || | |||| | || || |||||| | ||||| ||||| || | | ||||| || Sbjct 72974 TCTGTGGTTGACAGCCAAGGCCGTGTGATCAACACTTGGGCTGACATCATCAACCGTGCA 73033 Query 158600 GGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTGGATCTTGCT 158659 |||||||||||||| ||||| ||||||||||| ||||||||||| || || || ||| Sbjct 73034 AACCTTGGTATGGAAGTGATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTAGCT 73093 Score = 197 bits (218), Expect = 2e-45 Identities = 218/288 (76%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734 ||||||||| ||||| ||| || | ||||| | || | |||||||| ||||| || Sbjct 44485 CTTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCT 44426 Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATC-TGTTTCATCGTCGCCTTCGTCGCTGCTC 157793 ||||| ||||| | | ||||||| | ||||| || | |||||| ||||||||| Sbjct 44425 AATGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTC 44367 Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853 | ||||||||||| || || || || || || ||| ||||||| | |||||||||||| Sbjct 44366 CTCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACA 44307 Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913 |||||||||||||||| || | |||| || || || ||||| ||||||||||| | Sbjct 44306 ACATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTA 44247 Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTT 157961 ||||||| || || || ||||| || ||||| || ||||| || |||| Sbjct 44246 TCTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 44199 Score = 197 bits (218), Expect = 2e-45 Identities = 218/288 (76%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734 ||||||||| ||||| ||| || | ||||| | || | |||||||| ||||| || Sbjct 134873 CTTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCT 134932 Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATC-TGTTTCATCGTCGCCTTCGTCGCTGCTC 157793 ||||| ||||| | | ||||||| | ||||| || | |||||| ||||||||| Sbjct 134933 AATGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTC 134991 Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853 | ||||||||||| || || || || || || ||| ||||||| | |||||||||||| Sbjct 134992 CTCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACA 135051 Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913 |||||||||||||||| || | |||| || || || ||||| ||||||||||| | Sbjct 135052 ACATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTA 135111 Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTT 157961 ||||||| || || || ||||| || ||||| || ||||| || |||| Sbjct 135112 TCTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 135159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573011006680800