Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq1813 526 3e-144 >seq1813 Length=181482 Score = 526 bits (582), Expect = 3e-144 Identities = 510/656 (78%), Gaps = 0/656 (0%) Strand=Plus/Plus Query 181308 TACATGGGACGTGAATGGGAACTCTCTTACCGCTTAGGTATGCGCCCCTGGATCTGTGTT 181367 |||||||| ||||| ||||| || | ||| || || ||||| || ||||| ||| Sbjct 72437 TACATGGGCCGTGAGTGGGAGCTTAGCTTCCGTTTGGGCATGCGTCCTTGGATTGCTGTA 72496 Query 181368 GCATACTCTGCTCCAGTCGCAGCAGCATCTGCTGTATTCCTAGTCTATCCTTTCGGTCAA 181427 || ||||||||||| || ||||| || | || || ||| | |||| ||| | |||||| Sbjct 72497 GCTTACTCTGCTCCGGTTGCAGCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCAA 72556 Query 181428 GGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGTT 181487 || |||||||| | ||||| |||||||| || || || ||||||| ||| |||| Sbjct 72557 GGCAGCTTCTCTGATGGTATGCCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGTG 72616 Query 181488 TTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTA 181547 |||||||| |||||||||||||| ||||| || ||||||||| | ||||| || || || Sbjct 72617 TTCCAAGCTGAGCACAACATTCTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGTG 72676 Query 181548 TTTGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGT 181607 ||||| || || ||||| ||||| ||||| ||||| |||||||| || | ||||| Sbjct 72677 TTTGGCGGCTCTCTGTTTAGTGCTATGCATGGTTCCTTGGTTACTTCCAGCTTAATCCGT 72736 Query 181608 GAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACA 181667 ||||| ||||||| ||||| ||| |||||||||||| || ||||||| || || Sbjct 72737 GAGACTACTGAAAACGAGTCTGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAAACT 72796 Query 181668 TACAACATCGTCGCCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATTC 181727 ||||||||||| || || |||||||||||||||||| | || |||||||| ||| ||| Sbjct 72797 TACAACATCGTGGCTGCTCACGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGCTTC 72856 Query 181728 AACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTC 181787 |||||||| ||||| ||||||||||||| || || ||||||||||| || |||||||| Sbjct 72857 AACAACTCTCGTTCTTTGCACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGGTTT 72916 Query 181788 ACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCT 181847 || || || || | ||||| ||||| || ||||| || || |||||||||||||| ||| Sbjct 72917 ACTGCTCTTGGTATCAGCACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAATCT 72976 Query 181848 ATCCTCGACGGACAAGGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCGTGCCGGT 181907 | | ||| | ||||| ||||| ||||||| ||||| ||| | |||||||||| Sbjct 72977 GTGGTTGACAGCCAAGGCCGTGTGATCAACACTTGGGCTGACATCATCAACCGTGCAAAC 73036 Query 181908 CTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGC 181963 || || |||||||| ||||||||||| ||||| ||||||||||| ||||| || || Sbjct 73037 CTTGGTATGGAAGTGATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTAGC 73092 Score = 520 bits (576), Expect = 1e-142 Identities = 726/1006 (72%), Gaps = 10/1006 (1%) Strand=Plus/Plus Query 182373 GACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTCTT 182432 || |||||| || || ||| | ||||| ||||| |||||||| || | || || || Sbjct 117406 GATGACTGGCTTCGTCGTGATAGGTTTGTATTTGTTGGTTGGTCAGGTTTACTT-TTGTT 117464 Query 182433 CCCAC-TGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTTG 182491 ||| |||||| |||| |||||||||||||||| || ||| ||||||| || || Sbjct 117465 CCCTTGTGCTTACTTTGCTCTTGGCGGTTGGCTTACCGGAACAACTTTTGTAACATCATG 117524 Query 182492 GTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTG 182550 ||| || || || | || || || ||||| || ||| |||||| | || || || | Sbjct 117525 GTATACTCATGGGTTGGCAAGCTCTTACCTTGAGGGCTGC-AACTTTTTGACTGCTGCCG 117583 Query 182551 TCTCGACGCCTGCTGAT-GCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 182609 | || || || ||| | ||| ||| |||||||||| | ||| ||||| || || || Sbjct 117584 TGTCAACCCCAGCTAACAGCT-TGGCTCATTCTCTTTTACTATGGTGGGGGCCGGAAGCT 117642 Query 182610 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 182669 || || |||| || ||||| ||||| || || || |||| ||| || ||| | || Sbjct 117643 CAAGGAGATTTTACTCGTTGGTGTCAACTAGGTGGTCTTTGGACTTTTGTAGCTTTGCAT 117702 Query 182670 GGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGG 182728 ||||| || | | ||||| ||||||||| | ||||||||| | |||||| ||| | Sbjct 117703 GGTGCTTTTGGCTTGATTGGATTCATGCTTCGCCAATTTGAATTGGCTCGCTCTG--TCC 117760 Query 182729 AATCA-GACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGT 182787 ||| | ||||||| || || |||||||||||||| |||||| | || || || ||||| Sbjct 117761 AATTACGACCTTATAACGCCATTGCTTTTTCTGGACCTATTTCAGTTTTTGTATCTGTGT 117820 Query 182788 TCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGG 182847 || | || |||||| | || || || |||||| || || || ||||| || || | Sbjct 117821 TCTTAATTTATCCTCTTGGTCAATCAGGTTGGTTCTTTGCTCCAAGTTTTGGAGTTGCAG 117880 Query 182848 CGATCTTCAGGTTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCC 182907 | |||||| | ||| | ||||| | || ||||| || ||||||||||| ||||| |||| Sbjct 117881 CAATCTTCCGTTTCATTTTGTTTTTCCAAGGTTTTCATAACTGGACACTTAACCCTTTCC 117940 Query 182908 ATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCA 182967 |||||||||| || |||||| | | || | || || ||| |||| || ||||| | | Sbjct 117941 ATATGATGGGTGTGGCTGGTGTTTTAGGAGCTGCTCTTCTCTGTGCAATTCATGGCGCAA 118000 Query 182968 CAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATT 183027 | || || || || |||| |||||||||||| || ||||| || || || | Sbjct 118001 CTGTGGAAAACACTTTGTTTGAAGATGGAGATGGTGCGAACACTTTCCGTGCCTTTAACC 118060 Query 183028 CCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCT 183087 | || ||| || || || ||||| |||||||| || || ||||| ||||| || |||| Sbjct 118061 CTACACAGTCCGAAGAAACATATTCCATGGTTACTGCAAACCGTTTCTGGTCTCAGATCT 118120 Query 183088 TCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCA 183147 | || |||| ||| || || || ||| | || ||||||||| | ||||||||||| | Sbjct 118121 TTGGTATTGCTTTTTCGAACAAACGATGGCTTCATTTCTTTATGCTTTTTGTTCCTGTAA 118180 Query 183148 TGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATG 183207 ||| |||||| | | ||||| | | || |||||||| |||||| | || |||| Sbjct 118181 CGGGGCTTTGGATGAGCGCAATTGGTGTAGTAGGTCTTGCTCTCAATCTTAGAGCATATG 118240 Query 183208 ATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAA 183267 ||||||| |||||||||| |||| |||||||||||||| || || || || ||||||| Sbjct 118241 ATTTTGTATCTCAAGAGATTCGAGCTGCAGAAGATCCTGAATTTGAAACTTTTTACACAA 118300 Query 183268 AGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACATG 183327 | ||||| ||| | ||||| || | || || ||| |||| || ||||| || |||| Sbjct 118301 AAAACATTCTTTTAAATGAGGGTATCCGAGCCTGGATGGCCGCTCAAGATCAGCCTCATG 118360 Query 183328 AAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 |||| | | |||||||| || || ||||| | || ||||| || Sbjct 118361 AAAATCTTGTATTCCCTGAGGAGGTCCTACCACGTGGAAACGCTCT 118406 Score = 214 bits (236), Expect = 2e-50 Identities = 221/287 (77%), Gaps = 2/287 (1%) Strand=Plus/Minus Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040 |||||||| ||||| || || | |||||||| || |||||||||| || || || Sbjct 44484 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 44425 Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATC-TGTTTCATCGTCGCCTTCGTCGCTGCTCC 181099 ||||| || || || ||| | ||||| | ||||| || | |||||| |||||||||| Sbjct 44424 ATGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCC 44366 Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159 |||||||||||||| || || ||||| || || ||||||| | ||||||||||||| Sbjct 44365 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 44306 Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219 ||||||||||||||| || | || | || || ||||||||||||||||| || || Sbjct 44305 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 44246 Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 181266 |||||| || || || |||||||| ||||| || ||||| || |||| Sbjct 44245 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 44199 Score = 214 bits (236), Expect = 2e-50 Identities = 221/287 (77%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040 |||||||| ||||| || || | |||||||| || |||||||||| || || || Sbjct 134874 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 134933 Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATC-TGTTTCATCGTCGCCTTCGTCGCTGCTCC 181099 ||||| || || || ||| | ||||| | ||||| || | |||||| |||||||||| Sbjct 134934 ATGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCC 134992 Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159 |||||||||||||| || || ||||| || || ||||||| | ||||||||||||| Sbjct 134993 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 135052 Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219 ||||||||||||||| || | || | || || ||||||||||||||||| || || Sbjct 135053 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 135112 Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 181266 |||||| || || || |||||||| ||||| || ||||| || |||| Sbjct 135113 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 135159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614603663545920