Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq1813 558 5e-154 >seq1813 Length=181482 Score = 558 bits (618), Expect = 5e-154 Identities = 734/1005 (73%), Gaps = 14/1005 (1%) Strand=Plus/Plus Query 175863 GAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGGTCTGGATTACTACTTCTT 175922 || |||||||||| | ||||||||| | ||| |||| ||||| || ||||| || || Sbjct 117406 GATGACTGGCTTCGTCGTGATAGGTTTGTATTTGTTGGTTGGTCAGGTTTACTT-TTGTT 117464 Query 175923 CCCAC-TGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGTCACGAGTTG 175981 ||| |||||| |||| ||||||| |||||||| || ||||||||||| || || Sbjct 117465 CCCTTGTGCTTACTTTGCTCTTGGCGGTTGGCTTACCGGAACAACTTTTGTAACATCATG 117524 Query 175982 GTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGG-TGCTAACTTTCTCACAGCGGCTG 176040 ||| || ||||| | || || || |||||||| ||| |||||| | || || || | Sbjct 117525 GTATACTCATGGGTTGGCAAGCTCTTACCTTGAGGGCTGC-AACTTTTTGACTGCTGCCG 117583 Query 176041 TCTCGACTCCTGCTGAT-GCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAATCT 176099 | || || || ||| | ||| ||| |||||||||| | ||| ||||| || ||| || Sbjct 117584 TGTCAACCCCAGCTAACAGCT-TGGCTCATTCTCTTTTACTATGGTGGGGGCCGGAAGCT 117642 Query 176100 CAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGCTCTCCAC 176159 || || || || || ||| ||||| || || |||||| | ||||| ||| | || Sbjct 117643 CAAGGAGATTTTACTCGTTGGTGTCAACTAGGTGGTCTTTGGACTTTTGTAGCTTTGCAT 117702 Query 176160 GGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGACTCATTGGT 176219 ||||| || | ||||||||||||||||||| || |||||| |||| | ||| | Sbjct 117703 GGTGCTTTTGGCTTGATTGGATTCATGCTTCGCCAATTTGAATTGGCTCG-CTCTGTCCA 117761 Query 176220 ATC-CGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAGTGTGTT 176278 || || || || ||||| ||||| || ||| ||||| | || ||||| |||||| Sbjct 117762 ATTACGACCTTATAACGCCATTGCTTTTTCTGGACCTATTTCAGTTTTTGTATCTGTGTT 117821 Query 176279 TCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGTGGCAGC 176338 | | || || || |||||||| ||||||||||| || ||||| || ||||| Sbjct 117822 CTTAATTTATCCTCTTGGTCAATCAGGTTGGTTCTTTGCTCCAAGTTTTGGAGTTGCAGC 117881 Query 176339 AATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAACCCCTTCCA 176398 |||||| | ||| | |||||| | || ||||| || ||||||||||| ||||| ||||| Sbjct 117882 AATCTTCCGTTTCATTTTGTTTTTCCAAGGTTTTCATAACTGGACACTTAACCCTTTCCA 117941 Query 176399 TATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGGCGTTAC 176458 ||||||||| || |||||| | |||| | || || || | |||||| ||||||| || Sbjct 117942 TATGATGGGTGTGGCTGGTGTTTTAGGAGCTGCTCTTCTCTGTGCAATTCATGGCGCAAC 118001 Query 176459 TGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTTCGATTC 176518 ||| ||||| || | | |||||||||||| ||||| ||| ||| || | | Sbjct 118002 TGTGGAAAACACTTTGTTTGAAGATGGAGATGGTGCGAACACTTTCCGTGCCTTTAACCC 118061 Query 176519 CACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCAAATCTT 176578 || ||| ||||| || ||||| ||||||||||| ||||| |||||||| || ||||| Sbjct 118062 TACACAGTCCGAAGAAACATATTCCATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTT 118121 Query 176579 CGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCCTGTCAT 176638 || |||| ||| || || || |||||||| ||||||||| | ||||| ||||| | Sbjct 118122 TGGTATTGCTTTTTCGAACAAACGATGGCTTCATTTCTTTATGCTTTTTGTTCCTGTAAC 118181 Query 176639 GGGTCTTTGGGT---CTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTA 176695 ||| |||||| | | || ||||| | | || |||||||| |||||| | || || Sbjct 118182 GGGGCTTTGGATGAGCGCA---ATTGGTGTAGTAGGTCTTGCTCTCAATCTTAGAGCATA 118238 Query 176696 TGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTCTACAC 176755 ||||||||| ||||||||| |||| |||||||||||||| ||||||||||| ||||| Sbjct 118239 TGATTTTGTATCTCAAGAGATTCGAGCTGCAGAAGATCCTGAATTTGAAACTTTTTACAC 118298 Query 176756 AAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAACCACA 176815 ||| ||||| ||| | || || || | |||| |||||||| || ||||| || || Sbjct 118299 AAAAAACATTCTTTTAAATGAGGGTATCCGAGCCTGGATGGCCGCTCAAGATCAGCCTCA 118358 Query 176816 TGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 ||| |||||||||| || || || ||||| | || ||||| Sbjct 118359 TGAAAATCTTGTATTCCCTGAGGAGGTCCTACCACGTGGAAACGC 118403 Score = 410 bits (454), Expect = 2e-109 Identities = 485/653 (74%), Gaps = 4/653 (1%) Strand=Plus/Plus Query 174794 CTATATGGGACGTGAGTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGGATCTGTGT 174853 ||| ||||| ||||||||||| || | ||||| || ||| | |||||||| ||| Sbjct 72436 CTACATGGGCCGTGAGTGGGAGCTTAGCTTCCGTTTGGGCATGCGTCCTTGGATTGCTGT 72495 Query 174854 AGCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCTTTCGGTCA 174913 ||| |||||||| || |||||||| ||| | ||||| ||| | |||| ||| | ||||| Sbjct 72496 AGCTTACTCTGCTCCGGTTGCAGCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCA 72555 Query 174914 AGGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCAACTACATGTTGGT 174973 ||| ||||| || | ||||| | || || || || || ||||||| ||| | || Sbjct 72556 AGGCAGCTTCTCTGATGGTATGCCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGT 72615 Query 174974 CTTCCAAGCAGAACATAACATCTTGATGCACCCCTTCCACATGTTGGGAGTCGCAGGTGT 175033 |||||||| || || ||||| | |||||||| ||||||||| | || || || || || Sbjct 72616 GTTCCAAGCTGAGCACAACATTCTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGT 72675 Query 175034 CTTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCACTTGTTACCTCTTCA-CTT-GTC 175091 || || || || |||| || ||||||||||| | ||||| || || ||| || Sbjct 72676 GTTTGGCGGCTCTCTGTTTAGTGCTATGCATGGTTCCTTGGTTACTTC--CAGCTTAATC 72733 Query 175092 CGTGAGACAACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGCCAAGAAGAAGAG 175151 |||||||| ||||||| ||||| ||| |||||||||||| || ||||||| || Sbjct 72734 CGTGAGACTACTGAAAACGAGTCTGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAA 72793 Query 175152 ACCTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCA 175211 || || ||||||||||| || || || ||||| ||||| | || |||||||||||| Sbjct 72794 ACTTACAACATCGTGGCTGCTCACGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGC 72853 Query 175212 TTCAACAACTCACGCTCACTCCACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTATCTGG 175271 ||||||||||| || || | ||||||||| |||| || ||||| || || || |||||| Sbjct 72854 TTCAACAACTCTCGTTCTTTGCACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGG 72913 Query 175272 TTCACCGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATGGTTTCAACTTCAACCAG 175331 || || || |||||| | ||| ||||| |||||||| || ||||||||||||||||| Sbjct 72914 TTTACTGCTCTTGGTATCAGCACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAA 72973 Query 175332 TCTGTTATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGGATGTTCTTAACAGAGCT 175391 ||||| | ||| | ||||| | || | ||||| ||||| || | | ||| | || Sbjct 72974 TCTGTGGTTGACAGCCAAGGCCGTGTGATCAACACTTGGGCTGACATCATCAACCGTGCA 73033 Query 175392 GGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCACACAACTTCCCACTAGA 175444 ||||| |||||||| ||||| ||| | || || ||||||||||| || || Sbjct 73034 AACCTTGGTATGGAAGTGATGCACGAGCGTAACGCTCACAACTTCCCTCTTGA 73086 Score = 196 bits (216), Expect = 7e-45 Identities = 201/260 (77%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 174495 AATCGTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCCGCAAC- 174553 || || |||||| |||||||||| |||||||||||||| ||||| | || | ||||| Sbjct 44457 AACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATCCCTACCCTATTGACTGCAACC 44398 Query 174554 TGTATGTTTCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAATCCGTGA 174613 | ||||| ||||| || ||| | | |||||| || ||||||||||| || || ||||| Sbjct 44397 TCCGTGTTT-ATTATTGCCTTCATCGCTGCTCCTCCTGTGGACATCGATGGTATTCGTGA 44339 Query 174614 ACCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTAG 174673 || || ||||||| | ||||||| |||||||||||||||||||| || | |||| Sbjct 44338 GCCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATCTCTGGTGCTATTATCCCTAC 44279 Query 174674 TTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGACGAATG 174733 || || || ||||| ||||||||||| |||||||| || || | || || ||||| Sbjct 44278 CTCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAGGCTGCTTCCCTTGATGAATG 44219 Query 174734 GCTCTACAACGGTGGTCCTT 174753 ||| |||||||| || |||| Sbjct 44218 GCTTTACAACGGCGGCCCTT 44199 Score = 196 bits (216), Expect = 7e-45 Identities = 201/260 (77%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 174495 AATCGTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCCGCAA-C 174553 || || |||||| |||||||||| |||||||||||||| ||||| | || | |||| | Sbjct 134901 AACCGCCTTTACATCGGTTGGTTTGGTGTTCTAATGATCCCTACCCTATTGACTGCAACC 134960 Query 174554 TGTATGTTTCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAATCCGTGA 174613 | ||||| ||||| || ||| | | |||||| || ||||||||||| || || ||||| Sbjct 134961 TCCGTGTTT-ATTATTGCCTTCATCGCTGCTCCTCCTGTGGACATCGATGGTATTCGTGA 135019 Query 174614 ACCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTAG 174673 || || ||||||| | ||||||| |||||||||||||||||||| || | |||| Sbjct 135020 GCCTGTTTCTGGTTCTTTGCTGTATGGTAACAACATCATCTCTGGTGCTATTATCCCTAC 135079 Query 174674 TTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGACGAATG 174733 || || || ||||| ||||||||||| |||||||| || || | || || ||||| Sbjct 135080 CTCTGCTGCCATTGGTCTTCACTTCTACCCTATCTGGGAGGCTGCTTCCCTTGATGAATG 135139 Query 174734 GCTCTACAACGGTGGTCCTT 174753 ||| |||||||| || |||| Sbjct 135140 GCTTTACAACGGCGGCCCTT 135159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729913048846320