Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1075 98.7 8e-16 seq1800 84.2 2e-11 >seq1075 Length=42261 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095 ||||||||||| | ||||| ||||| || || ||||| || || |||| |||| Sbjct 14865 AATACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAATCAGCCAGCGTGCGGCCGTCC 14806 Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155 || ||||| ||||||||| | ||||| ||||| || || || || | ||||| || || Sbjct 14805 TCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCC 14746 Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 ||||||| ||| | || || | ||||||| | || ||||| || ||||| | | Sbjct 14745 TGGATCTTGGCTTTGACAGTGTCAATGGTGTCTGATGACTCCACTTCGAGGGTTATGGTT 14686 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | |||| || || || |||||||| Sbjct 14685 TTTGCTGTCAATGTACGAACGAAAATTTGCAT 14654 >seq1800 Length=440711 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| ||||| ||||| |||| ||| | || || | |||||| |||||||| Sbjct 106644 TGCCTCCTCGCAAGCGCAAGACCAGATGCAGGGTGCTCTCGTCTTGAATGTTGTAGTCCG 106703 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | ||||| | || || ||||| || || || | ||||| |||||||||||||| | Sbjct 106704 CCAGGGTGCGCCCATCCTCCAGCTGCTTTCCCGCAAAGATGAGCCGCTGTTGATCCGGAG 106763 Query 27139 GCACACCCTCTTTATC 27154 | | ||||| |||| Sbjct 106764 GAATGCCCTCCATATC 106779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424925005497168