Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq1813 497 1e-135 >seq1813 Length=181482 Score = 497 bits (550), Expect = 1e-135 Identities = 528/693 (76%), Gaps = 4/693 (1%) Strand=Plus/Plus Query 176414 TCCACTTCCTTATCGGTATCTCAGCTTACATGGGACGCCAATGGGAACTTAGTTACAGAC 176473 |||||||||| | ||| | | |||||||| || | ||||| ||||| | | | Sbjct 72411 TCCACTTCCTATTGGGTGTGGCTTGCTACATGGGCCGTGAGTGGGAGCTTAGCTTCCGTT 72470 Query 176474 TAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGATGGCAG 176533 | ||||||||||||||||| ||| || |||||||| || || | || || | |||| Sbjct 72471 TGGGCATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCGGTTGCAGCTGCTACCGCAG 72530 Query 176534 TTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATTT 176593 | ||| | |||| || | |||||||| |||||||||||||||||||||||||||| Sbjct 72531 TGTTCTTGATCTACCCTATTGGTCAAGGCAGCTTCTCTGATGGTATGCCTCTTGGCATTT 72590 Query 176594 CAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCAT 176653 | || || |||||||||||| |||| |||||||| |||||||||||||| |||||||| | Sbjct 72591 CCGGCACTTTCAACTTTATGATTGTGTTCCAAGCTGAGCACAACATTCTTATGCACCCTT 72650 Query 176654 TCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGAA 176713 |||| |||||||| || || || |||||||| || ||||| || || ||||| || Sbjct 72651 TCCACATGCTTGGTGTGGCTGGCGTGTTTGGCGGCTCTCTGTTTAGTGCTATGCATGGTT 72710 Query 176714 GTCTTGTTACTTCTTCA-CTTGTTA-GAGAGACAACCGAAAACGAATCACAAAACTACGG 176771 | |||||||| || ||| | | ||||| || |||||||| || ||| || Sbjct 72711 CCTTGGTTACTTC--CAGCTTAATCCGTGAGACTACTGAAAACGAGTCTGCTAACGCTGG 72768 Query 176772 TTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGG 176831 |||||| || || ||||||| || || |||||||| || ||||| |||||||||||||| Sbjct 72769 TTACAAGTTTGGTCAAGAAGGTGAAACTTACAACATCGTGGCTGCTCACGGTTACTTTGG 72828 Query 176832 TCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGC 176891 ||| || || ||||| || ||| ||||| ||||| | | | ||||||||||| || Sbjct 72829 TCGCCTAATTTTCCAATACGCTAGCTTCAACAACTCTCGTTCTTTGCACTTCTTCCTAGC 72888 Query 176892 AGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAA 176951 || | || || || |||||||||||||||| | ||| | |||| ||||| ||||| Sbjct 72889 TGCTTGGCCTGTAGTAGGCATCTGGTTTACTGCTCTTGGTATCAGCACTATGGCGTTCAA 72948 Query 176952 CCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCCTAC 177011 |||||||||||||||||||||||| ||||| | |||| | || ||||| || Sbjct 72949 CCTTAACGGTTTCAACTTCAACCAATCTGTGGTTGACAGCCAAGGCCGTGTGATCAACAC 73008 Query 177012 ATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAATGC 177071 |||| || ||| | |||||||||||||||||||||||||| |||||||||||||| || Sbjct 73009 TTGGGCTGACATCATCAACCGTGCAAACCTTGGTATGGAAGTGATGCACGAGCGTAACGC 73068 Query 177072 TCACAACTTCCCACTTGACCTTGCTGCTGCAGA 177104 |||||||||||| |||||||| ||| | | ||| Sbjct 73069 TCACAACTTCCCTCTTGACCTAGCTTCCGTAGA 73101 Score = 165 bits (182), Expect = 1e-35 Identities = 208/284 (73%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 19347 CGTGGTCGTATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTA 19406 || || || || || | ||| ||||| |||||||| ||||||||||| ||||| | || Sbjct 27514 CGAGGACGAATTCATTTTGAATTTGATAAGTGTATTGCCTGTGAGGTTTGTGTTCGCGTT 27455 Query 19407 TGCCCTATCAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGAC--AAAGAAGAAAG 19464 |||||||| ||| ||||||| || ||||| | ||| | | |||||| ||| Sbjct 27454 TGCCCTATTAATTTACCAGTTGTTCATTGGCAATTT--CAACCCGTTCAAAAGAAAAAAC 27397 Query 19465 AACTTAGAAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGT 19524 || | | ||| || |||||||||||||| || || ||||| ||||| ||||||| Sbjct 27396 AATTGAAGGCCTATAGTATTGACTTTGGAGCATGCATCTTTTGCGGGAACTGTGTAGAGT 27337 Query 19525 ATTGCCCAACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGACAGAC 19584 |||| || ||||| || |||| ||||||||||| |||||| || || | ||| ||| Sbjct 27336 ATTGTCCTACAAATTGCTTATCAATGACAGAAGAGTATGAAATGTCTGTGTATGATCGAC 27277 Query 19585 ATCAACTTAACTTTGATAACGTCGCTCTTGGACGATTGCCCACT 19628 || | || || | |||| || | || ||||| ||||||||| || Sbjct 27276 ATGAGCTCAATTATGATCACATTGCGCTTGGTCGATTGCCCGCT 27233 Score = 165 bits (182), Expect = 1e-35 Identities = 208/284 (73%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 19347 CGTGGTCGTATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTA 19406 || || || || || | ||| ||||| |||||||| ||||||||||| ||||| | || Sbjct 151844 CGAGGACGAATTCATTTTGAATTTGATAAGTGTATTGCCTGTGAGGTTTGTGTTCGCGTT 151903 Query 19407 TGCCCTATCAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGAC--AAAGAAGAAAG 19464 |||||||| ||| ||||||| || ||||| | ||| | | |||||| ||| Sbjct 151904 TGCCCTATTAATTTACCAGTTGTTCATTGGCAATTT--CAACCCGTTCAAAAGAAAAAAC 151961 Query 19465 AACTTAGAAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGT 19524 || | | ||| || |||||||||||||| || || ||||| ||||| ||||||| Sbjct 151962 AATTGAAGGCCTATAGTATTGACTTTGGAGCATGCATCTTTTGCGGGAACTGTGTAGAGT 152021 Query 19525 ATTGCCCAACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGACAGAC 19584 |||| || ||||| || |||| ||||||||||| |||||| || || | ||| ||| Sbjct 152022 ATTGTCCTACAAATTGCTTATCAATGACAGAAGAGTATGAAATGTCTGTGTATGATCGAC 152081 Query 19585 ATCAACTTAACTTTGATAACGTCGCTCTTGGACGATTGCCCACT 19628 || | || || | |||| || | || ||||| ||||||||| || Sbjct 152082 ATGAGCTCAATTATGATCACATTGCGCTTGGTCGATTGCCCGCT 152125 Score = 145 bits (160), Expect = 9e-30 Identities = 205/288 (71%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 176113 TTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTC 176172 || ||| | ||||| |||| || | ||| | ||||| | |||||||||||||| || Sbjct 44484 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 44425 Query 176173 ATGATTCCATGTCTGCTCACTGCTGCAGCATGTTTTATCGTTGCATTTATTGCAGCACCA 176232 ||||| || || | ||||| | | ||||| |||| || || || || || Sbjct 44424 ATGATCCCTACCCTATTGACTGCAACCTCCGTGTTTATTATTGCCTTCATCGCTGCTCCT 44365 Query 176233 CCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAAC 176292 ||||| || ||||| |||||||| || || || | || ||| | || ||||| |||||| Sbjct 44364 CCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAAC 44305 Query 176293 ATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAATC 176352 |||||||| || || | |||| | ||| || || || || ||||||||||| ||| Sbjct 44304 ATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTATC 44245 Query 176353 TGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATAC 176400 ||||| || || | |||| |||||||| ||||| || || || ||| Sbjct 44244 TGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTTAC 44197 Score = 145 bits (160), Expect = 9e-30 Identities = 205/288 (71%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 176113 TTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTC 176172 || ||| | ||||| |||| || | ||| | ||||| | |||||||||||||| || Sbjct 134874 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 134933 Query 176173 ATGATTCCATGTCTGCTCACTGCTGCAGCATGTTTTATCGTTGCATTTATTGCAGCACCA 176232 ||||| || || | ||||| | | ||||| |||| || || || || || Sbjct 134934 ATGATCCCTACCCTATTGACTGCAACCTCCGTGTTTATTATTGCCTTCATCGCTGCTCCT 134993 Query 176233 CCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAAC 176292 ||||| || ||||| |||||||| || || || | || ||| | || ||||| |||||| Sbjct 134994 CCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAAC 135053 Query 176293 ATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAATC 176352 |||||||| || || | |||| | ||| || || || || ||||||||||| ||| Sbjct 135054 ATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTATC 135113 Query 176353 TGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATAC 176400 ||||| || || | |||| |||||||| ||||| || || || ||| Sbjct 135114 TGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTTAC 135161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603480715764480