Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1770 102 7e-17 >seq1770 Length=296915 Score = 102 bits (112), Expect = 7e-17 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 ||||||| |||||||||| || ||||||||||| | |||||| |||||||| ||| Sbjct 92414 TGGCAGAACATGTGGCACGGCGGCAGCGCCATCAGCTGCAGATCCGCGGGGTTCCAGGCG 92473 Query 6797 CACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGC 6856 ||| | || || || || || || || ||| | ||| ||| | | | |||| Sbjct 92474 GACAATATGAGCCGTCGATCCTCGGGCTTGGTCTTGATCCTGTGGATGAGATCCGCCAGC 92533 Query 6857 TGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGT 6916 |||||| | ||||| || | |||||||| | | || || | || || ||||| Sbjct 92534 TGGTCCACGCCCTGCCCGGTGTAGTCCGCGTGCATGTCCGTGTATTTGGCGCCGAAGTGG 92593 Query 6917 CTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCG 6960 | ||||||||| ||||| || || |||| |||| |||||| || Sbjct 92594 CGCCACTGGAAACCGTACACGGGACCCAGGTCGTGCTCCTCGCG 92637 Score = 102 bits (112), Expect = 7e-17 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 34385 CGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAG 34444 || |||||| |||| |||| || || ||||| ||||||||| | ||||| || || | Sbjct 92637 CGCGAGGAGCACGACCTGGGTCCCGTGTACGGTTTCCAGTGGCGCCACTTCGGCGCCAAA 92578 Query 34445 TATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATC 34504 || || | | |||||||| | || ||||| | |||||||||| | | | ||| Sbjct 92577 TACACGGACATGCACGCGGACTACACCGGGCAGGGCGTGGACCAGCTGGCGGATCTCATC 92518 Query 34505 GACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAG 34564 ||| | ||| || || || || || || || | ||| ||| |||||||| | Sbjct 92517 CACAGGATCAAGACCAAGCCCGAGGATCGACGGCTCATATTGTCCGCCTGGAACCCCGCG 92458 Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCA 34608 ||||| | ||||||||||| || |||||||||| ||||||| Sbjct 92457 GATCTGCAGCTGATGGCGCTGCCGCCGTGCCACATGTTCTGCCA 92414 Score = 96.9 bits (106), Expect = 3e-15 Identities = 99/128 (77%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 6612 CCAC-GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACC 6670 |||| ||| || ||||||||| |||||||| | ||| || |||||||||||||| Sbjct 91557 CCACAGACTTGCGCGATCATGAGGGTGAGCAGGGAGTAGGACGCGATGTTGAACGGCACG 91616 Query 6671 CCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACG 6730 || | |||||||| | ||| || || || | |||||| |||||||| |||| ||| ||| Sbjct 91617 CCGAGGCCCATGTCGCACGACCGCTGGTACATCTGGCACGACAGCTCGCCATCCGCCACG 91676 Query 6731 TAGAATTG 6738 ||||| || Sbjct 91677 TAGAACTG 91684 Score = 96.9 bits (106), Expect = 3e-15 Identities = 99/128 (77%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 34607 CAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATG 34666 || |||||||| ||| |||| |||||||| |||||| | || || || ||| | |||||| Sbjct 91684 CAGTTCTACGTGGCGGATGGCGAGCTGTCGTGCCAGATGTACCAGCGGTCGTGCGACATG 91625 Query 34667 GGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCAT 34726 || | || |||||||||||||| || ||| | |||||||| ||||||||| || Sbjct 91624 GGCCTCGGCGTGCCGTTCAACATCGCGTCCTACTCCCTGCTCACCCTCATGATCGCGCAA 91565 Query 34727 GTC-GTGG 34733 ||| |||| Sbjct 91564 GTCTGTGG 91557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448252235650080