Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1776 113 4e-20 seq1075 89.7 4e-13 >seq1776 Length=305386 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || ||||| ||||| ||||| || | | || || Sbjct 214074 CACCAAGTGAAGAGTGGACTCCTTCTGGATATTGTAATCCGCAAGGGTCCTGCCATCCTC 214015 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| || || ||||| | ||||||||| | ||| | | |||||||||| Sbjct 214014 CAGCTGCTTGCCAGCGAAGATAAGCCTCTGCTGGTCAGGGGGAATTCCCTCTTTGTCCTG 213955 Query 39195 GATTTTCTGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || || || | ||| | | | || |||||||||||||| || | |||||| | | Sbjct 213954 AATCTTGGCCTTCA-CGTTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCT 213896 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || ||||| || || |||||||| ||||| Sbjct 213895 TGCCGGTCAGGGTCTTCACAAAGATCTGCAT 213865 >seq1075 Length=42261 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||||| | | ||| |||||||| || || |||||| || || || ||||| || Sbjct 14880 CCTCCTCGGAGTCTTAATACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAATCAGCC 14821 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || |||| || ||||| || || || || || || ||||||||||| | ||| Sbjct 14820 AGCGTGCGGCCGTCCTCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGA 14761 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | | ||| |||||| ||| || ||||| || | | || || |||||||| Sbjct 14760 ATCCCCTCCTTGTCCTGGATCTTGGCTTTGACAGTGTCAATGGTGTCTGATGACTCCACT 14701 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | || || ||||| | |||| || ||| || |||||||| Sbjct 14700 TCGAGGGTTATGGTTTTTGCTGTCAATGTACGAACGAAAATTTGCAT 14654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429536103552182