Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq1813 567 9e-157 >seq1813 Length=181482 Score = 567 bits (628), Expect = 9e-157 Identities = 733/1004 (73%), Gaps = 6/1004 (1%) Strand=Plus/Plus Query 185973 GATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTTTT 186032 |||||||||||| || || | ||||| ||||| || ||||| || |||||| | || Sbjct 117406 GATGACTGGCTTCGTCGTGATAGGTTTGTATTTGTTGGTTGGTCAGGTTTACTTTTGTTC 117465 Query 186033 CCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCTGG 186092 || |||||| | || |||| || |||||||| || ||||| ||||| || ||| Sbjct 117466 CCTTGTGCTTACTTTGCTCTTGGCGGTTGGCTTACCGGAACAACTTTTGTAACATCATGG 117525 Query 186093 TATACCCACGGGTTGGCGTCTTCTTACCTTGAGGG-TGCTAATTTTCTCACGGCAGCAGT 186151 ||||| || |||||||| |||||||||||||| ||| | |||| | || || || || Sbjct 117526 TATACTCATGGGTTGGCAAGCTCTTACCTTGAGGGCTGCAACTTTT-TGACTGCTGCCGT 117584 Query 186152 GTCAACTCCTGCTGAC-GCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 186210 |||||| || ||| || ||| ||| |||||||||| | ||| ||||| || || ||| Sbjct 117585 GTCAACCCCAGCTAACAGCT-TGGCTCATTCTCTTTTACTATGGTGGGGGCCGGAAGCTC 117643 Query 186211 AAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 186270 |||||||| | | || |||| ||||| || || || |||| |||||| || | || | Sbjct 117644 AAGGAGATTTTACTCGTTGGTGTCAACTAGGTGGTCTTTGGACTTTTGTAGCTTTGCATG 117703 Query 186271 GAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCGTCTC-GTAGGT 186329 | || |||| | || || |||||||| || || |||||| | ||| ||| || Sbjct 117704 GTGCTTTTGGCTTGATTGGATTCATGCTTCGCCAATTTGAATTGGCTCG-CTCTGTCCAA 117762 Query 186330 ATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATTC 186389 | || || || || ||||||||||||||||| ||||| | || ||||| ||| ||| Sbjct 117763 TTACGACCTTATAACGCCATTGCTTTTTCTGGACCTATTTCAGTTTTTGTATCTGTGTTC 117822 Query 186390 CTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGCA 186449 | || || |||||||| || || |||||||| ||||| |||||||| |||||| Sbjct 117823 TTAATTTATCCTCTTGGTCAATCAGGTTGGTTCTTTGCTCCAAGTTTTGGAGTTGCAGCA 117882 Query 186450 ATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCAC 186509 ||||| | ||| | ||||| ||||||| || || |||||||| | || || ||||| Sbjct 117883 ATCTTCCGTTTCATTTTGTTTTTCCAAGGTTTTCATAACTGGACACTTAACCCTTTCCAT 117942 Query 186510 ATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTACT 186569 ||||||||||| || ||| | | || | |||||| || | ||||| ||||| | ||| Sbjct 117943 ATGATGGGTGTGGCTGGTGTTTTAGGAGCTGCTCTTCTCTGTGCAATTCATGGCGCAACT 118002 Query 186570 GTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTCAAAGCATTCGATACG 186629 || ||||| ||| | | ||||||||| || || ||||| ||| || || | | Sbjct 118003 GTGGAAAACACTTTGTTTGAAGATGGAGATGGTGCGAACACTTTCCGTGCCTTTAACCCT 118062 Query 186630 ACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATCTTC 186689 || || |||||||| ||||| ||||| ||||| ||| | |||||||| |||||||| Sbjct 118063 ACACAGTCCGAAGAAACATATTCCATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 118122 Query 186690 GGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTATG 186749 || ||||| ||| || || || |||||||||||||| ||||| ||||||||||| | | Sbjct 118123 GGTATTGCTTTTTCGAACAAACGATGGCTTCATTTCTTTATGCTTTTTGTTCCTGTAACG 118182 Query 186750 GGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGAC 186809 || ||||||| | ||||| | | ||||||||||| || ||| | || ||||| Sbjct 118183 GGGCTTTGGATGAGCGCAATTGGTGTAGTAGGTCTTGCTCTCAATCTTAGAGCATATGAT 118242 Query 186810 TTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAG 186869 |||||| ||| ||| | |||| ||||| |||||||| || || || || || || || Sbjct 118243 TTTGTATCTCAAGAGATTCGAGCTGCAGAAGATCCTGAATTTGAAACTTTTTACACAAAA 118302 Query 186870 AATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATGAA 186929 || || || || ||||| ||| | || ||||||||||| | ||||| || |||||| Sbjct 118303 AACATTCTTTTAAATGAGGGTATCCGAGCCTGGATGGCCGCTCAAGATCAGCCTCATGAA 118362 Query 186930 AACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973 || ||||||| ||||| || || | ||| | || |||||||| Sbjct 118363 AATCTTGTATTCCCTGAGGAGGTCCTACCACGTGGAAACGCTCT 118406 Score = 563 bits (624), Expect = 1e-155 Identities = 537/684 (79%), Gaps = 2/684 (0%) Strand=Plus/Plus Query 183497 TCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGA-ATTGTCTTACCGT 183555 |||||||||| | || || ||||||||||| ||||||||||| || ||| |||| Sbjct 72411 TCCACTTCCTATTGGGTGTGGCTTGCTACATGGGCCGTGAGTGGGAGCTTAGCTT-CCGT 72469 Query 183556 CTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGCT 183615 | || |||||||||||||| ||| ||||| || || ||||| ||||| ||||| Sbjct 72470 TTGGGCATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCGGTTGCAGCTGCTACCGCA 72529 Query 183616 GTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATC 183675 || ||| || |||| ||| | |||||||| || |||||||||||| || || || Sbjct 72530 GTGTTCTTGATCTACCCTATTGGTCAAGGCAGCTTCTCTGATGGTATGCCTCTTGGCATT 72589 Query 183676 AGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCC 183735 ||||| || |||| |||| |||| |||||||| ||||||||||| || |||||||| Sbjct 72590 TCCGGCACTTTCAACTTTATGATTGTGTTCCAAGCTGAGCACAACATTCTTATGCACCCT 72649 Query 183736 TTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGT 183795 ||||||||||| ||||| ||||| || || || || |||||||| ||||| ||||| ||| Sbjct 72650 TTCCACATGCTTGGTGTGGCTGGCGTGTTTGGCGGCTCTCTGTTTAGTGCTATGCATGGT 72709 Query 183796 TCTCTGGTTACTTCCTCGCTGGTTCGTGAAACCACTGAGTCTGAGTCACAGAACTATGGT 183855 || ||||||||||| | | ||||| || ||||| ||||| ||| |||| Sbjct 72710 TCCTTGGTTACTTCCAGCTTAATCCGTGAGACTACTGAAAACGAGTCTGCTAACGCTGGT 72769 Query 183856 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGT 183915 |||||||| |||||||||| || || |||||||| || |||||||| || ||||||||| Sbjct 72770 TACAAGTTTGGTCAAGAAGGTGAAACTTACAACATCGTGGCTGCTCACGGTTACTTTGGT 72829 Query 183916 CGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCT 183975 || || || ||||| || ||| || ||||| ||||||||| | ||||||||||| ||| Sbjct 72830 CGCCTAATTTTCCAATACGCTAGCTTCAACAACTCTCGTTCTTTGCACTTCTTCCTAGCT 72889 Query 183976 GCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAAC 184035 |||||||| || || |||||||||||||||||||||||| | ||||||||||| || ||| Sbjct 72890 GCTTGGCCTGTAGTAGGCATCTGGTTTACTGCTCTTGGTATCAGCACTATGGCGTTCAAC 72949 Query 184036 CTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACACC 184095 || || ||||| ||||||||||| || | |||| | ||||| ||||| | ||||| Sbjct 72950 CTTAACGGTTTCAACTTCAACCAATCTGTGGTTGACAGCCAAGGCCGTGTGATCAACACT 73009 Query 184096 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCT 184155 ||||| ||| | |||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct 73010 TGGGCTGACATCATCAACCGTGCAAACCTTGGTATGGAAGTGATGCACGAGCGTAACGCT 73069 Query 184156 CACAACTTCCCTCTCGACCTTGCT 184179 |||||||||||||| ||||| ||| Sbjct 73070 CACAACTTCCCTCTTGACCTAGCT 73093 Score = 233 bits (258), Expect = 2e-56 Identities = 225/289 (78%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254 ||||||||||||| ||||||||||| | |||||||| || | ||||||||||| || Sbjct 44485 CTTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCT 44426 Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGCTTCATCGTTGCCTTCGTCGCTGCTCC 183314 ||||| || || || ||| | |||||| | || || |||||||| |||||||||| Sbjct 44425 AATGATCCCTACCCTATTGACTGCAACCTCCGTGTTTATTATTGCCTTCATCGCTGCTCC 44366 Query 183315 TCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAA 183374 ||||||||||||||| || || || || || ||| |||| || | ||||||| ||||| Sbjct 44365 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 44306 Query 183375 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCAT 183434 ||||||||||||||| || | ||| | || || ||||| ||||||||||| || || Sbjct 44305 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 44246 Query 183435 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTAC 183483 |||||| || || || || ||||| ||||| || ||||| || |||||| Sbjct 44245 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTTAC 44197 Score = 233 bits (258), Expect = 2e-56 Identities = 225/289 (78%), Gaps = 0/289 (0%) Strand=Plus/Plus Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254 ||||||||||||| ||||||||||| | |||||||| || | ||||||||||| || Sbjct 134873 CTTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCT 134932 Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGCTTCATCGTTGCCTTCGTCGCTGCTCC 183314 ||||| || || || ||| | |||||| | || || |||||||| |||||||||| Sbjct 134933 AATGATCCCTACCCTATTGACTGCAACCTCCGTGTTTATTATTGCCTTCATCGCTGCTCC 134992 Query 183315 TCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAA 183374 ||||||||||||||| || || || || || ||| |||| || | ||||||| ||||| Sbjct 134993 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 135052 Query 183375 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCAT 183434 ||||||||||||||| || | ||| | || || ||||| ||||||||||| || || Sbjct 135053 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 135112 Query 183435 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTAC 183483 |||||| || || || || ||||| ||||| || ||||| || |||||| Sbjct 135113 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTTAC 135161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622056294553680