Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq1813 609 3e-169 >seq1813 Length=181482 Score = 609 bits (674), Expect = 3e-169 Identities = 529/657 (81%), Gaps = 0/657 (0%) Strand=Plus/Plus Query 169679 TACATGGGTCGTGAGTGGGAATTGTCCTATCGTCTGGGTATGCGCCCTTGGATCTGTGTT 169738 |||||||| ||||||||||| | || ||| |||| ||||| |||||||| ||| Sbjct 72437 TACATGGGCCGTGAGTGGGAGCTTAGCTTCCGTTTGGGCATGCGTCCTTGGATTGCTGTA 72496 Query 169739 GCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCTGTTTTCCTGGTCTACCCGTTTGGGCAA 169798 |||||||||||||| ||||| || || |||| || ||| || ||||||| |||| ||| Sbjct 72497 GCTTACTCTGCTCCGGTTGCAGCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCAA 72556 Query 169799 GGGTCGTTCTCTGACGCTATGCCTCTGGGTATCTCGGGAACCTTTAACTACATGCTGGTC 169858 || |||||||| | ||||||||| || || || || || || |||| ||| | || Sbjct 72557 GGCAGCTTCTCTGATGGTATGCCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGTG 72616 Query 169859 TTCCAAGCTGAGCACAACATCCTCATGCACCCCTTCCACATGCTTGGTGTTGCGGGAGTG 169918 |||||||||||||||||||| || |||||||| ||||||||||||||||| || || ||| Sbjct 72617 TTCCAAGCTGAGCACAACATTCTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGTG 72676 Query 169919 TTTGGTGGGTCTCTGTTTAGCGCGATGCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGT 169978 ||||| || ||||||||||| || ||||| ||| | | || ||||| || | ||||| Sbjct 72677 TTTGGCGGCTCTCTGTTTAGTGCTATGCATGGTTCCTTGGTTACTTCCAGCTTAATCCGT 72736 Query 169979 GAAACCACCGAGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 170038 || || || || |||||||| ||| |||||||||||| |||||||||| || || Sbjct 72737 GAGACTACTGAAAACGAGTCTGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAAACT 72796 Query 170039 TACAACATCGTTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 170098 ||||||||||| || |||||||||||||| |||||||| || |||||||||||| |||| Sbjct 72797 TACAACATCGTGGCTGCTCACGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGCTTC 72856 Query 170099 AACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTC 170158 |||||||| ||||| ||||||||||||| || || |||||||| || ||||||||||| Sbjct 72857 AACAACTCTCGTTCTTTGCACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGGTTT 72916 Query 170159 ACCGCTCTTGGTGTCTCCACGATGGCGTTCAACCTGAACGGTTTCAACTTCAACCAGTCC 170218 || ||||||||| || ||| |||||||||||||| |||||||||||||||||||| || Sbjct 72917 ACTGCTCTTGGTATCAGCACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAATCT 72976 Query 170219 ATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGT 170278 | | || | || || |||||| ||||||| ||||| ||| | |||||||||| Sbjct 72977 GTGGTTGACAGCCAAGGCCGTGTGATCAACACTTGGGCTGACATCATCAACCGTGCAAAC 73036 Query 170279 CTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTCGCT 170335 ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct 73037 CTTGGTATGGAAGTGATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTAGCT 73093 Score = 600 bits (664), Expect = 1e-166 Identities = 743/1009 (74%), Gaps = 6/1009 (1%) Strand=Plus/Plus Query 170607 GATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGGTCTGGACTTCTTCTTTTT 170666 |||||||||||| |||||| ||||||||||||| || ||||| || | ||| | || Sbjct 117406 GATGACTGGCTTCGTCGTGATAGGTTTGTATTTGTTGGTTGGTCAGGTTTACTTTTGTTC 117465 Query 170667 CCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCACGACATTTGTTACAAGTTGG 170726 || |||||| |||| ||||||| |||||||| || || || ||||| ||| ||| Sbjct 117466 CCTTGTGCTTACTTTGCTCTTGGCGGTTGGCTTACCGGAACAACTTTTGTAACATCATGG 117525 Query 170727 TACACCCACGGACTTGCAAGTTCGTACCTTGAAGG-TGCTAATTTCCTTACAGCGGCTGT 170785 || || || || | ||||| || |||||||| || ||| | ||| | || || || || Sbjct 117526 TATACTCATGGGTTGGCAAGCTCTTACCTTGAGGGCTGCAACTTTT-TGACTGCTGCCGT 117584 Query 170786 GTCAACGCCTGCTGAT-GCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 170844 |||||| || ||| | ||| ||| |||||||||| | ||| ||||| || || ||| Sbjct 117585 GTCAACCCCAGCTAACAGCT-TGGCTCATTCTCTTTTACTATGGTGGGGGCCGGAAGCTC 117643 Query 170845 AGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 170904 | || ||||| || |||| ||||| || || || |||| |||||| || | || | Sbjct 117644 AAGGAGATTTTACTCGTTGGTGTCAACTAGGTGGTCTTTGGACTTTTGTAGCTTTGCATG 117703 Query 170905 GAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCAGTCGTCTCGTAGGGA 170964 | || |||| | || || ||||||||||| || |||||| | ||| ||| | Sbjct 117704 GTGCTTTTGGCTTGATTGGATTCATGCTTCGCCAATTTGAATTGGCTCG-CTCTGTCCAA 117762 Query 170965 TTA-GACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGTTC 171023 ||| |||| || || || || ||||| ||||| ||||| | || ||||| |||||| Sbjct 117763 TTACGACCTTATAACGCCATTGCTTTTTCTGGACCTATTTCAGTTTTTGTATCTGTGTTC 117822 Query 171024 CTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCA 171083 | || ||||||||||| || ||| |||||||||| || || ||||||||||||||| Sbjct 117823 TTAATTTATCCTCTTGGTCAATCAGGTTGGTTCTTTGCTCCAAGTTTTGGAGTTGCAGCA 117882 Query 171084 ATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTCAT 171143 |||||||| ||| | | || | |||||||| || ||||||||||| || || || ||| Sbjct 117883 ATCTTCCGTTTCATTTTGTTTTTCCAAGGTTTTCATAACTGGACACTTAACCCTTTCCAT 117942 Query 171144 ATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACA 171203 ||||||||||| || ||| | | || | ||| | || | |||||||||||| | || Sbjct 117943 ATGATGGGTGTGGCTGGTGTTTTAGGAGCTGCTCTTCTCTGTGCAATTCATGGCGCAACT 118002 Query 171204 GTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACG 171263 || || || ||||||| ||||||||| ||| || ||||| || || ||| || | Sbjct 118003 GTGGAAAACACTTTGTTTGAAGATGGAGATGGTGCGAACACTTTCCGTGCCTTTAACCCT 118062 Query 171264 ACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATTTTT 171323 || ||| ||||| |||||||| ||||| ||||| || ||||||||||| ||||| ||| Sbjct 118063 ACACAGTCCGAAGAAACATATTCCATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 118122 Query 171324 GGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCATG 171383 ||||| || || || || || ||| | |||||||||||||| ||||||||||| | | Sbjct 118123 GGTATTGCTTTTTCGAACAAACGATGGCTTCATTTCTTTATGCTTTTTGTTCCTGTAACG 118182 Query 171384 GGTCTTTGGGTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTAATCTTAGGGCTTATGAT 171443 || |||||| | || | || | | ||||||||||| |||||||| || |||||| Sbjct 118183 GGGCTTTGGATGAGCGCAATTGGTGTAGTAGGTCTTGCTCTCAATCTTAGAGCATATGAT 118242 Query 171444 TTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTCGAGACGTTCTATACCAAG 171503 || ||| ||| ||| | |||| ||||||||||| || || || || || || || || Sbjct 118243 TTTGTATCTCAAGAGATTCGAGCTGCAGAAGATCCTGAATTTGAAACTTTTTACACAAAA 118302 Query 171504 AACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCAGTAGACCAACCACATGAA 171563 ||||| || || ||||| ||| | || || |||||||| | ||| || || |||||| Sbjct 118303 AACATTCTTTTAAATGAGGGTATCCGAGCCTGGATGGCCGCTCAAGATCAGCCTCATGAA 118362 Query 171564 AACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCACTTTGAT 171612 || |||| ||||| ||||| || ||||| ||||| || || |||| || Sbjct 118363 AATCTTGTATTCCCTGAGGAGGTCCTACCACGTGGAAACGCTCTTTAAT 118411 Score = 223 bits (246), Expect = 4e-53 Identities = 223/287 (78%), Gaps = 2/287 (1%) Strand=Plus/Minus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 ||||| | ||||| ||| |||||| ||||| || || |||||||||| || || || Sbjct 44484 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 44425 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACT-TGTTTCATCATCGCCTTCATCGGTGCTCC 169470 |||||||| ||| || | |||||| | ||||| || || |||||||||| |||||| Sbjct 44424 ATGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCC 44366 Query 169471 CCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAA 169530 |||||||||||||| || || || || || ||| |||||||| || ||||||||||||| Sbjct 44365 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 44306 Query 169531 CATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCAT 169590 |||||||||||||||| || | || | || || || |||||||||||||| || || Sbjct 44305 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 44246 Query 169591 CTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTT 169637 |||||| || || || ||||||||| | |||||||| || |||| Sbjct 44245 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 44199 Score = 223 bits (246), Expect = 4e-53 Identities = 223/287 (78%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 ||||| | ||||| ||| |||||| ||||| || || |||||||||| || || || Sbjct 134874 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 134933 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACT-TGTTTCATCATCGCCTTCATCGGTGCTCC 169470 |||||||| ||| || | |||||| | ||||| || || |||||||||| |||||| Sbjct 134934 ATGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCC 134992 Query 169471 CCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAA 169530 |||||||||||||| || || || || || ||| |||||||| || ||||||||||||| Sbjct 134993 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 135052 Query 169531 CATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCAT 169590 |||||||||||||||| || | || | || || || |||||||||||||| || || Sbjct 135053 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 135112 Query 169591 CTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTT 169637 |||||| || || || ||||||||| | |||||||| || |||| Sbjct 135113 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 135159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592184971901280