Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq487 140 3e-28 seq2625 132 5e-26 seq4017 125 7e-24 seq824 111 2e-19 seq4073 107 2e-18 seq3072 91.5 2e-13 seq3627 89.7 5e-13 seq308 82.4 8e-11 >seq487 Length=466406 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || |||||||| |||| ||||| || Sbjct 175896 ATGCAGATCTTCGTGAAGACTCTGACGGGGAAGACCATCACGCTCGAGGTCGAGAGCAGT 175955 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | |||| ||||||| ||||| ||||| || || | |||||| Sbjct 175956 GATACCATCGACAATGTGAAGGTTAAAATTCAGGACAAGGAGGGAATTCCTCCTGACCAG 176015 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| ||| ||||| || || || |||| |||||||| |||||||||| Sbjct 176016 CAGAGGCTGATCTTCGCCGGCAAGCAACTCGAAGACGGACGCACCCTTGCCGACTACAAC 176075 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||| |||| || ||||| ||| | || |||||||| || Sbjct 176076 ATCCAGAAGGAATCCACACTCCATCTGGTGCTTCGGTTGAGGGGAGG 176122 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || || ||||| |||| || ||| | || Sbjct 182554 ATGCAAATCTTCGTGAAGACCCTCACAGGAAAGACGATCACTCTCGAGGTGGAAAGCTCC 182613 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| |||| | |||| | |||| |||||| | ||||| || || || || | ||||| Sbjct 182614 GACACCGTGGACAACG-TGAAGGCAAAAATCCAGGACAAGGAAGGGATTCCACCAGACCA 182672 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| || || ||||| || || | ||||| ||| |||||||| Sbjct 182673 GCAGAGGCTGATCTTCGCTGGTAAGCAGCTCGAAGATGGCCGCACTCTCGCAGACTACAA 182732 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||| |||| || ||| | ||| | || ||||| || || Sbjct 182733 CATCCAAAAGGAGTCCACTCTCCATTTGGTGCTCCGTTTGAGAGGAGG 182780 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||||||||||||| |||| || || | || Sbjct 176808 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAAACCATCACCCTCGAGGTGGAGAGCTCC 176867 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||| | || || | ||||| ||||| |||||| | ||||| Sbjct 176868 GACACTATCGACAACG-TCAAAGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCA 176926 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| ||| || || ||| |||| || | ||||||||| |||||||| Sbjct 176927 GCAGAGGTTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGCACCCTCGCAGACTACAA 176986 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||| | || || ||| | ||| | || ||||||| || Sbjct 176987 CATCCAAAAGGAGTCTACTCTCCATTTGGTGCTTCGTCTGAGGGGAGG 177034 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || |||||||||||||| || |||||||| ||||| | || || || | | Sbjct 182781 AATGCAGATCTTCGTAAAAACGCTGACCGGCAAAACGATCACTCTGGAAGTGGAGAGCTC 182840 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||||| | | |||| | ||| || | ||| ||||| |||||||| || | || | Sbjct 182841 CGACACTATCGACAACGTTAAAGCTAAGA-TTCAGGACAAGGAGGGCATTCCTCCTGATC 182899 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||| || | |||| ||| || || ||||| || || | || |||||| ||||||| Sbjct 182900 AGCAAAGATTGATCTTCGCTGGTAAGCAGCTCGAAGATGGTCGTACCCTCGCAGACTACA 182959 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||| |||||| |||| || ||| | ||| | || | ||||| || Sbjct 182960 ACATCCAAAAGGAGTCCACTCTCCATTTGGTGCTTCGTCTCAGGGGAGG 183008 Score = 122 bits (134), Expect = 9e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || ||||| ||||| || |||||||| |||| ||||| | Sbjct 182095 AACATGCAGATCTTTGTGAAGACGCTGACGGGAAAGACCATCACGCTCGAGGTCGAGAGC 182154 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | ||| | | | | | | |||| || |||| || || ||||| |||||| | ||| Sbjct 182155 AGCGATACCATCGACAATGTGAAGGCCAAGATTCAGGATAAGGAGGGAATCCCCCCTGAC 182214 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | | |||| || || || ||||| || |||| |||||||| || ||| Sbjct 182215 CAGCAGAGGTTGATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGCACCCTTGCAGATTAC 182274 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||| |||| || || | ||| | || |||||||| || Sbjct 182275 AACATCCAGAAGGAGTCCACCCTTCACTTGGTGCTTCGGTTGAGGGGAGG 182324 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| |||| || || | || Sbjct 176124 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTGGAGAGCTCC 176183 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 176184 GACACCATCGACAACG-TGAAAGCTAAGATTCAGGACAAGGAGGGAATTCCCCCAGACCA 176242 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | ||| ||||| || |||| |||| || || ||| |||||||| Sbjct 176243 GCAGAGGCTGATTTTCGCTGGCAAGCAATTGGAAGACGGCCGAACTCTCGCGGACTACAA 176302 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||| | || || || | ||| | || |||||||| || Sbjct 176303 CATCCAAAAGGAGTCGACTCTTCACTTGGTGCTTCGGTTGAGGGGAGG 176350 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| || || || ||||| ||||||||||| | || || || | | Sbjct 183332 AATGCAAATCTTCGTCAAGACTCTGACGGGGAAAACCATCACTCTGGAAGTGGAGAGCTC 183391 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | | || | ||||| | ||||| ||||| || || | ||||| Sbjct 183392 TGACACCATCGACAATGTGAAAGCCAAAATCCAGGACAAGGAGGGAATTCCTCCCGACCA 183451 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| |||||||| || | || || || ||| ||||| Sbjct 183452 GCAGCGATTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACACTGGCCGATTACAA 183511 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| || || ||| | ||| ||||||| |||||||| Sbjct 183512 CATTCAAAAAGAGTCGACGTTGCATCTGGTGTTGCG 183547 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| |||||||| | || || ||| | | Sbjct 177492 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACCATCACTCTGGAGGTAGAAAGCTCG 177551 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||| || |||| ||||| || || || ||| | |||||| Sbjct 177552 GATACGATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATTCCCCCAGACCAG 177611 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| ||| ||||| ||||| || || | ||||||||| ||||||||| Sbjct 177612 CAGAGGCTGATCTTCGCTGGCAAGCAGCTCGAAGATGGCCGCACCCTCGCAGACTACAAC 177671 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || ||||||||| | || || ||| | ||| | || ||||||| ||| Sbjct 177672 ATTCAGAAGGAGTCTACTCTCCATTTGGTGCTTCGTCTGAGGGGAGGC 177719 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||||||||| || ||||| | || || ||| | || Sbjct 176352 ATGCAAATCTTCGTGAAGACCCTCACGGGCAAGACGATCACTTTGGAGGTTGAAAGCTCC 176411 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | ||||| ||||| || ||| | ||||| Sbjct 176412 GACACCATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCA 176470 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| ||||| || |||| |||| || || || |||||||| Sbjct 176471 GCAGAGGCTGATCTTCGCTGGCAAGCAATTGGAAGACGGCCGAACTCTTGCGGACTACAA 176530 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| ||||| | || || ||| | || | || ||||| || || Sbjct 176531 CATCCAAAAGGAATCAACTCTCCATTTGGTTCTTCGTTTGAGAGGAGG 176578 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| ||||| || || || ||||| | || || ||| | || Sbjct 176580 ATGCAGATTTTTGTGAAAACACTCACCGGTAAGACTATCACTTTAGAAGTAGAAAGCTCC 176639 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| |||| | ||||||| ||||| ||||| || || | ||||| Sbjct 176640 GATACCATTGATAACG-TCAAAGCCAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 176698 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || || ||||| || |||| || || || |||||||| Sbjct 176699 GCAGAGGCTGATCTTTGCCGGTAAGCAGCTCGAGGACGGCCGAACTCTTGCAGACTACAA 176758 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||| |||| || ||| | ||| | || |||||||| || Sbjct 176759 CATCCAAAAGGAGTCCACTCTTCATTTGGTGCTTCGGTTGAGGGGAGG 176806 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || || || | || || ||| | || Sbjct 182326 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACAATTACTCTGGAGGTGGAAAGCTCC 182385 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || |||| ||||| ||||| || ||| | |||||| Sbjct 182386 GACACCATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAG 182445 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| ||| || || ||||| || |||| |||||||| ||||||||| Sbjct 182446 CAGAGGTTGATCTTCGCTGGAAAGCAGCTCGAAGACGGCCGCACCCTTGCAGACTACAAC 182505 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| |||||| |||| || ||| | ||| | || | ||||| || Sbjct 182506 ATCCAAAAGGAGTCCACTCTCCATTTGGTGCTTCGTCTCAGGGGAGG 182552 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| | || || || || ||||| | || || ||| | | Sbjct 177264 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACGATCACTCTTGAGGTAGAAAGCTCG 177323 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | || | || |||| ||||| || || || ||| | |||||| Sbjct 177324 GATACGATCGATAATGTGAAAGCTAAGATTCAGGACAAGGAAGGGATTCCCCCAGACCAG 177383 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| ||| || || ||||| || || | || || ||| ||||||||| Sbjct 177384 CAGAGGCTGATCTTCGCTGGAAAGCAGCTCGAAGATGGCCGAACTCTCGCGGACTACAAC 177443 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||| || ||| | ||| |||| | ||||| || Sbjct 177444 ATCCAGAAGGAGTCCACTCTCCATTTGGTGCTGCGTCTCAGGGGAGG 177490 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || |||| ||||| || || || || | |||||||| | || |||| ||| ||||| Sbjct 183189 AAGATTCAGGACAAGGAAGGAATTCCACCAGACCAGCAGAGGCTGATCTTCGCTGGCAAG 183248 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| || || | ||||| ||| ||||||||||| ||||||||| | || || ||| Sbjct 183249 CAGCTCGAAGATGGCCGCACGCTCGCAGACTACAACATTCAGAAGGAGTCTACTCTCCAT 183308 Query 40894 CTAGTGTTGCGCTTGAGGGGCGG 40916 | ||| | || ||||| || || Sbjct 183309 TTGGTGCTCCGTTTGAGAGGAGG 183331 >seq2625 Length=346021 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| || ||||| |||||||| ||| |||| ||||| | Sbjct 280423 ATGCAAATTTTCGTTAAAACTCTGACGGGGAAAACCATTACCCTCGAGGTCGAGAGTTCT 280482 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | || || ||||| |||||| | || ||| Sbjct 280483 GACACCATCGACAATGTCAAGACTAAGATCCAGGATAAGGAGGGAATCCCCCCAGATCAG 280542 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| ||| |||||||| || || |||| || || || |||||||||| Sbjct 280543 CAGAGGTTGATCTTCGCCGGCAAACAACTAGAGGACGGCCGGACGCTGGCCGACTACAAC 280602 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || ||||| ||| ||||||| ||||| || || | |||||||| ||| Sbjct 280603 ATTCAGAAAGAGTCCACGCTTCATCTTGTTCTGAGATTGAGGGGAGGC 280650 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||||||||| ||||||||||| | || |||||| | | Sbjct 280651 ATGCAGATCTTCGTGAAGACGCTCACGGGGAAAACCATCACGTTGGAGGTCGAAAGCTCT 280710 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | || ||||||| ||||| ||||| ||||| | || ||| Sbjct 280711 GACACAATTGACATCGTGAAAACCAAAATTCAGGACAAGGAGGGAATCCCTCCAGATCAG 280770 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || ||||| ||| |||| || | || |||||| ||||||||| Sbjct 280771 CAGAGGTTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGTACCCTCGCGGACTACAAC 280830 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||| || ||| | || |||||||| ||| || | |||||||| ||| Sbjct 280831 ATCCAAAAAGAGTCGACTCTGCATCTTGTGCTGAGGTTGAGGGGAGGC 280878 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || |||||||| | || |||||| | | Sbjct 280195 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACCATCACTCTTGAGGTCGAAAGCTCT 280254 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | ||| ||||||| || || |||||||| ||| | |||||| Sbjct 280255 GATACGATCGACAATGTGAAGACGAAAATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 280314 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | || | ||| || ||||| || || |||| ||||| || |||||||||| Sbjct 280315 CAGCGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGCACGCTGGCCGACTACAAC 280374 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||| || ||| |||| ||||||| |||||| Sbjct 280375 ATCCAAAAAGAGTCCACTTTGCATCTTGTGTTG 280407 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || || || || || ||||| | || ||||| Sbjct 279964 AAGATGCAGATCTTCGTGAAGACTCTGACAGGGAAGACGATCACTTTGGAGGTCGAGAGT 280023 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||| | | | | |||| ||||| ||||| | ||||| |||||||||||| | || Sbjct 280024 TCCGATACCATCGACAACG-TCAAGAGCAAAATCCAGGACAAGGAGGGCATCCCCCCTGA 280082 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || | || | ||| ||||| || || || || | |||| | |||||| Sbjct 280083 CCAGCAGCGGTTGATTTTCGCCGGCAAGCAACTCGAGGATGGTCGCAGTTTGGCCGACTA 280142 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||| |||||||||||| ||| |||||| Sbjct 280143 CAATATCCAGAAGGAGAGCACTCTGCAT 280170 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || || |||||| | || || ||| | || Sbjct 281107 ATGCAGATTTTCGTCAAGACTCTTACAGGGAAGACTATCACCCTGGAGGTTGAAAGCTCC 281166 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| | ||| || || | || || || || || || | || || Sbjct 281167 GATACTATCGACAACG-TGAAGACTAAGATCCAAGATAAGGAAGGAATTCCACCAGATCA 281225 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | || | || || || ||| |||| |||| || || || |||||||| Sbjct 281226 GCAGCGGTTGATTTTTGCCGGTAAGCAGTTGGAGGACGGCCGAACGCTGGCTGACTACAA 281285 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||| |||||| |||| || ||||| |||||| | |||||||| || Sbjct 281286 CATCCAAAAGGAGTCCACTCTCCATCTGGTGTTGAGATTGAGGGGAGG 281333 >seq4017 Length=874442 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||||||| | || || || || Sbjct 472659 ATGCAGATCTTCGTGAAGACATTGACTGGCAAGACCATCACCTTGGAGGTGGAGAGTTCC 472718 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| ||||| | ||||| ||||| ||||| | |||||| Sbjct 472719 GACACCATCGACAATGTGAAGACCAAAATCCAAGACAAGGAGGGTATCCCTCCAGACCAG 472778 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||| |||| ||| ||||| ||||| || |||| | | ||||| |||||||||| Sbjct 472779 CAGCGACTAATCTTCGCAGGCAAGCAGCTTGAGGACGGGAGGACCCTTGCCGACTACAAC 472838 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| |||||| |||| || ||||| || || | |||| || || Sbjct 472839 ATCCAAAAGGAGTCCACCCTTCATCTCGTACTGAGGCTGAGAGGAGG 472885 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||| | || || || ||||| || |||| || || || Sbjct 472431 ATGCAAATCTTCGTCAAGACGTTGACAGGAAAGACCATTACTCTCGAGGTTGAGAGTTCC 472490 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| || || | || || ||||| || ||| | |||||| Sbjct 472491 GACACCATCGATAATGTGAAGACTAAGATCCAAGATAAGGAGGGTATTCCCCCAGACCAG 472550 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||| || |||||||| || |||| | || || |||||||||| Sbjct 472551 CAGCGTTTGATCTTCGCAGGTAAACAGCTTGAGGACGGTAGAACTCTGGCCGACTACAAC 472610 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || || |||||| | || || || || |||||| | ||||| || || Sbjct 472611 ATTCAAAAGGAGTCTACCCTCCACCTCGTGTTGAGGTTGAGAGGTGG 472657 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | ||||| || || || ||| |||| || || | | Sbjct 472203 ATGCAGATCTTCGTCAAGACTTTGACGGGTAAGACAATTACCCTCGAGGTGGAGAGCTCT 472262 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| ||||||| || || ||||| || ||| | |||||| Sbjct 472263 GACACCATCGACAATGTAAAGACTAAAATTCAAGATAAGGAGGGTATTCCCCCAGACCAG 472322 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| ||||| || || | | || || || |||||| Sbjct 472323 CAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGAAGGACGCTGGCTGATTACAAC 472382 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| |||||| |||| || || || || || | |||| || || Sbjct 472383 ATCCAAAAGGAGTCCACCCTTCACCTGGTTCTGAGACTGAGAGGAGG 472429 >seq824 Length=416372 Score = 111 bits (122), Expect = 2e-19 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773 |||||||| || |||||| |||| || || | | |||| | | | | | ||| Sbjct 211968 ACGGGCAAGACTATCACCCTCGAGGTGGAGTCTTCTGACACCATCGACAATGTGAAGACC 212027 Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || || | ||||| ||||| || ||| | |||||||| ||| | |||| ||| ||||| Sbjct 212028 AAGATCCAGGACAAGGAGGGGATTCCCCCAGACCAGCAGCGATTGATCTTCGCTGGCAAG 212087 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| || || | |||||||| |||||||||||||||||||||| | || ||||| Sbjct 212088 CAGCTTGAAGATGGTCGCACCCTTGCCGACTACAACATCCAGAAGGAGTCTACCCTGCAC 212147 Query 40894 CTAGTG 40899 || ||| Sbjct 212148 CTGGTG 212153 >seq4073 Length=488838 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| || ||||| ||||| || |||||||| | || || || | || Sbjct 173911 ATGCAGATATTCGTGAAGACGCTGACGGGGAAGACCATCACGTTGGAGGTGGAGAGCTCC 173852 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | || | || |||| ||||| ||||| ||||| | |||||| Sbjct 173851 GATACGATCGATAATGTGAAAGTTAAGATTCAAGACAAGGAGGGGATCCCTCCTGACCAG 173792 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || ||||| ||||| || || | ||||| || || |||||| Sbjct 173791 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAAC 173732 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || ||| | |||||| | |||| ||||| Sbjct 173731 ATCCAGAAGGAGTCGACTCTCCATTTGGTGTTGAGACTGAGAGGCGG 173685 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || |||||||| | || ||||| | | Sbjct 173683 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACGTTGGAGGTCGAGAGCTCT 173624 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| ||||||| ||||| ||||| || || | |||||| Sbjct 173623 GACACGATCGACAATGTGAAGGTCAAAATTCAGGACAAGGAGGGGATTCCTCCTGACCAG 173564 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| ||||| || || | ||||| || || |||||| Sbjct 173563 CAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAAC 173504 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||| ||||| | ||||| ||| | || ||| Sbjct 173503 ATCCAAAAGGAATCGACGCTTCATTTGGTTTTG 173471 >seq3072 Length=975934 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 ||||| | ||||| ||||| || || | || ||||| ||| | || | || || || Sbjct 270987 AAAATACAAGACAAGGAGGGAATTCCACCAGATCAGCAGCGATTGATTTTTGCTGGTAAG 271046 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||| |||| |||| ||||| || ||||||||||||||| || ||| |||| || || Sbjct 271047 CAGTTGGAGGACGGCCGCACGCTAGCCGACTACAACATCCAAAAAGAGTCCACCCTCCAC 271106 Query 40894 CTAGTGTTGCGCTTGAGGGGCGG 40916 || |||||| | |||||||| || Sbjct 271107 CTGGTGTTGAGATTGAGGGGAGG 271129 >seq3627 Length=715207 Score = 89.7 bits (98), Expect = 5e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| || || |||| ||||| ||| | |||| ||||||||| |||||||| Sbjct 381826 GACAAGGAGGGGATTCCTCCGGATCAGCAGCGATTGATCTTCGCGGGCAAGCAGCTGGAA 381885 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || | ||||| || |||||||||||| || |||||| | || |||| || ||| Sbjct 381886 GATGGTCGCACTCTTGCCGACTACAACATTCAAAAGGAGTCTACCTTGCACCTTGTG 381942 >seq308 Length=410546 Score = 82.4 bits (90), Expect = 8e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 139378 GCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGA 139437 |||||| ||||| ||||||||||||||||| | | ||| ||||||| |||| | || Sbjct 381198 GCACGGATTCCATTTGCACGAGTTCGGCGACACCACCAATGGGTGCATGTCGACGGGGCC 381257 Query 139438 GCACTTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGAGATCAGGCACGTCGG 139497 ||||||||| || | | ||||||||| ||||| | ||| | | |||| || Sbjct 381258 GCACTTCAATCCGCAGAAGAAGACCCACGGCGCTCCCGAGGATGAGGTGCGCCACGCTGG 381317 Query 139498 CGACCTGGGCAAC 139510 |||||||||||| Sbjct 381318 AGACCTGGGCAAC 381330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515192556727120