Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq487 158 1e-33 seq4017 118 1e-21 seq4073 113 5e-20 seq2625 104 3e-17 seq3072 91.5 2e-13 seq824 82.4 9e-11 >seq487 Length=466406 Score = 158 bits (174), Expect = 1e-33 Identities = 175/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||||| | ||||||||||| |||||| || ||| |||||||| |||||||| || Sbjct 183560 TCCTCCTCGCAGACGCAACACCAGATGCAACGTCGACTCTTTTTGAATGTTGTAATCGGC 183501 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||| || || | || || |||||||| |||||||| || | |||||||||||||| || Sbjct 183500 CAGTGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCGGGAGG 183441 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | |||||||||| |||||| ||| | | | | ||||| |||| || Sbjct 183440 AATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTGTCGATGGTGTCAGAGCTC---TC 183384 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||| || | ||||||||||| ||||| || ||||| || |||||||||||| Sbjct 183383 CACTTCCAGAGTGATGGTTTTCCCCGTCAGAGTCTTGACGAAGATTTGCATT 183332 Score = 149 bits (164), Expect = 7e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| ||||| | ||||||||| | ||| ||||||||| || ||||| || || Sbjct 182781 TCCTCCTCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGC 182722 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| || | || || ||||||||||||||||| || || | ||||||||| | || Sbjct 182721 GAGAGTGCGGCCATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGG 182662 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | | ||||||||| ||||||| || | ||| | |||| |||||| ||||| Sbjct 182661 AATCCCTTCCTTGTCCTGGATTTTTGCCTTCA-CGTTGTCCACGGTGTCGGAGCTTTCCA 182603 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||| ||||| || || || || || ||||| || ||||||||||| Sbjct 182602 CCTCGAGAGTGATCGTCTTTCCTGTGAGGGTCTTCACGAAGATTTGCAT 182554 Score = 129 bits (142), Expect = 7e-25 Identities = 170/232 (73%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || | ||| | ||||||||| | ||| ||||||||| || ||||| || || Sbjct 183008 CCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCG 182949 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || ||||||||||||||||| || | || ||||| || | || Sbjct 182948 AGGGTACGACCATCTTCGAGCTGCTTACCAGCGAAGATCAATCTTTGCTGATCAGGAGGA 182889 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | || |||||||||| ||| | || | || | ||| | | | ||||| |||| || Sbjct 182888 ATGCCCTCCTTGTCC-TGAATCTTAGCTTTAACGTTGTCGATAGTGTCGGAGCTC---TC 182833 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||| || | ||||| |||||||| || ||||| ||||| ||||| |||||| Sbjct 182832 CACTTCCAGAGTGATCGTTTTGCCGGTCAGCGTTTTTACGAAGATCTGCATT 182781 Score = 118 bits (130), Expect = 1e-21 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || | ||| | ||||||||| | || ||||||||| || ||||| || || Sbjct 177034 CCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCTGCG 176975 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || | ||||||||| ||||| || | | ||||||||| | || Sbjct 176974 AGGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCAGGGGGG 176915 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCG---CTCGATTC 43132 | | |||||||||| ||| || ||||| ||| | | | |||||| ||| || Sbjct 176914 ATTCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGTTGTCGATAGTGTCGGAGCTC---TC 176859 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| |||| |||||||||||||| || || ||||| || ||||| ||||| Sbjct 176858 CACCTCGAGGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 176808 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| ||||| | |||||||| | || |||||||| || ||||| || || Sbjct 176578 CCTCCTCTCAAACGAAGAACCAAATGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGCA 176519 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || |||| || | ||||| |||||||| || || | ||||||||| | || Sbjct 176518 AGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGA 176459 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 43135 | | |||||||||| ||| || || | ||| | | | |||||| ||| || Sbjct 176458 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCGGAGCTTTCAAC 176400 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || |||||||| || ||||| || ||||||||||| Sbjct 176399 CTCCAAAGTGATCGTCTTGCCCGTGAGGGTCTTCACGAAGATTTGCAT 176352 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || || || | ||||||||| | ||| ||||||||| || ||||| || || Sbjct 176806 CCTCCCCTCAACCGAAGCACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCA 176747 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || |||| || ||||||||||| || || || || | ||||||||| | || Sbjct 176746 AGAGTTCGGCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGA 176687 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||||||| ||| |||| | ||||| | | | || ||| ||| || Sbjct 176686 ATTCCCTCCTTGTCC-TGAATTTTGGCTTTGACGTTATCAATGGTATCGGAGCTTTCTAC 176628 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || || || || || || || ||||| || ||||| Sbjct 176627 TTCTAAAGTGATAGTCTTACCGGTGAGTGTTTTCACAAAAATCTGCAT 176580 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || | ||| | ||||||||| | || |||||| ||||| ||||| || || Sbjct 177718 CCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCG 177659 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || |||||||| |||||||| || || | ||||||||| | || Sbjct 177658 AGGGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGA 177599 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGA---TTC 43132 | | ||||||||| ||| | || | || | | | | ||| || ||| ||| Sbjct 177598 ATTCCTTCCTTGTCC-TGAATCTTGGCCTTCACATTATCGATCGTATC---CGAGCTTTC 177543 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| ||||| || || ||||| || ||||||||||| Sbjct 177542 TACCTCCAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 177492 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || | ||||| ||||||||| | ||| |||||| || || ||||| || || Sbjct 177490 CCTCCCCTGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCG 177431 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || |||||||| |||||||| || || | ||||||||| | || Sbjct 177430 AGAGTTCGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGA 177371 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGA---TTC 43132 | | ||||||||| ||| | || | ||| | | | | ||| || ||| ||| Sbjct 177370 ATCCCTTCCTTGTCC-TGAATCTTAGCTTTCACATTATCGATCGTATC---CGAGCTTTC 177315 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| || || || || | || || || ||||||||||| Sbjct 177314 TACCTCAAGAGTGATCGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 177264 >seq4017 Length=874442 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 ||| ||||| |||||||| ||||||||| || || |||||||||| |||| | | || Sbjct 472187 CAAGACCAAGTGCAATGTAGACTCCTTTTGGATGTTATAATCAGCCAATGTCCTCCCATC 472128 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || || ||||| || ||||| || || | ||||||||||| || | | ||||||||| Sbjct 472127 CTCGAGTTGCTTGCCGGCGAAAATCAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGTC 472068 Query 43091 CATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 | ||| | || || | | | | | | | ||| ||| ||| || || | ||||||| Sbjct 472067 C-TGAATCTTGGTCTTAACATTGTCGATCGTATCGGAGCTTTCGACCTCAAGAGTGATGG 472009 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 | || ||||| | ||||| |||||||| ||||| || Sbjct 472008 TCTTCCCCGTCAATGTCTTCACAAAGATCTGCATCTT 471972 Score = 105 bits (116), Expect = 8e-18 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| | | || || | ||| | ||| ||||||||| || ||||| || || Sbjct 472885 CCTCCTCTCAGCCTCAGTACGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCA 472826 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | |||| || |||||||| || ||||| || |||||||||||||| | || Sbjct 472825 AGGGTCCTCCCGTCCTCAAGCTGCTTGCCTGCGAAGATTAGTCGCTGCTGGTCTGGAGGG 472766 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTCC 43133 | | ||||||||| |||||| || | | | | |||||| ||| ||| Sbjct 472765 ATACCCTCCTTGTCTTGGATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTC---TCC 472709 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| ||||| || | ||||| || ||||| ||||| Sbjct 472708 ACCTCCAAGGTGATGGTCTTGCCAGTCAATGTCTTCACGAAGATCTGCAT 472659 Score = 104 bits (114), Expect = 3e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || |||||||| | ||| | || ||||||||| || || || || ||| Sbjct 473341 CCACCTCTCAACCGCAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTATAGTCGGCC 473282 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| | || || ||||| || |||||||| || | |||||||||||| | || Sbjct 473281 AAAGTCCTGCCATCTTCGAGCTGTTTCCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 473222 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCG---CTCGATTC 43132 | || ||||||| | ||| |||| || || | | | | |||||| ||| || Sbjct 473221 ATGCCTTCCTTGT-CTTGAATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTC---TC 473166 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || | |||||||| ||||| || || ||||| || || || ||||| Sbjct 473165 CACCTCCAAGGTGATGGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 473115 Score = 104 bits (114), Expect = 3e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || || || | ||| | |||||| || |||||||||||||| || || ||| Sbjct 473569 CCTCCCCTCAATCGTAGCACAAGATGCAAGGTAGATTCCTTTTGAATATTATAGTCTGCC 473510 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || ||||||||||| || || || | |||||||||||||| || Sbjct 473509 AAGGTACGACCATCCTCGAGCTGCTTACCGGCAAAGATCAATCGCTGCTGGTCGGGAGGA 473450 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | |||||| ||| || | ||||| | ||| | | | || || ||| ||| Sbjct 473449 ATACCCTCCTTATCC-TGGATCTTTGTCTTCACGTTGTCGATGGTATCTGAGCT---TTC 473394 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||||||||| || || | ||||| |||||||| ||||| Sbjct 473393 AACCTCCAAAGTGATGGTTTTTCCAGTCAATGTCTTGACAAAGATCTGCAT 473343 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| | | || |||| || | ||| ||||||||| || |||||||||||| Sbjct 472429 CCTCCTCTCAGTCTCAGAACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCC 472370 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | || || |||||||| || || || || || ||||||||||| | || Sbjct 472369 AGCGTCCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGA 472310 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | |||||| | | ||| |||| || || | | | | ||||| |||| || Sbjct 472309 ATACCCTCCTTAT-CTTGAATTTTAGTCTTTACATTGTCGATGGTGTCAGAGCTC---TC 472254 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| |||| || || || || ||||| | ||||| || ||||| ||||| Sbjct 472253 CACCTCGAGGGTAATTGTCTTACCCGTCAAAGTCTTGACGAAGATCTGCAT 472203 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | |||||| | || | || |||||||||||| ||||| || ||| Sbjct 472657 CCACCTCTCAACCTCAACACGAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCC 472598 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| | |||| || ||||| ||||| ||||| || | ||||||||||| | || Sbjct 472597 AGAGTTCTACCGTCCTCAAGCTGTTTACCTGCGAAGATCAAACGCTGCTGGTCTGGGGGA 472538 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTCC 43133 | | |||||| || ||| || || | | | | |||||| ||| || Sbjct 472537 ATACCCTCCTTATCTTGGATCTTAGTCTTCACATTATCGATGGTGTCGGAACTC---TCA 472481 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| || ||||| || || || | |||||| || ||||||||||| Sbjct 472480 ACCTCGAGAGTAATGGTCTTTCCTGTCAACGTCTTGACGAAGATTTGCAT 472431 >seq4073 Length=488838 Score = 113 bits (124), Expect = 5e-20 Identities = 168/232 (72%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| | ||| | || | ||||| ||| ||| || ||||| || ||||| ||| Sbjct 173001 CCTCCTCTGAGACGGAGGACAAGATGCAGGGTGGACTCTTTCTGAATGTTATAATCTGCC 173060 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| ||| | || || ||||||||||| ||||| || | | ||||||||||| || Sbjct 173061 AGAGTTCGCCCATCTTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGGTCGGGAGGA 173120 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131 | | ||||||||| ||| | || | ||||| ||| | | | ||||| |||| | Sbjct 173121 ATACCTTCCTTGTCC-TGAATCTTCGCTTTGA-CGTTGTCGATGGTGTCCGAGCTC---T 173175 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || | |||||||| ||||| || | || || || ||||||||||| Sbjct 173176 CGACCTCCAGAGTGATGGTCTTGCCGGTCAATGTTTTCACGAAGATTTGCAT 173227 Score = 105 bits (116), Expect = 8e-18 Identities = 167/233 (72%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | ||| | || | ||||| ||| ||| || ||||| || ||||| || Sbjct 172772 TCCTCCTCTAAGACGGAGGACAAGATGCAGGGTGGACTCTTTCTGAATGTTATAATCTGC 172831 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| ||| | || || || |||||||| ||||| || | | |||||| |||| || Sbjct 172832 AAGAGTTCGCCCATCTTCGAGTTGCTTACCGGCGAAGATCAACCTCTGCTGATCGGGAGG 172891 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCC-ACCGTGTC---GCTCGAT 43130 | | ||||||||| ||| | || | ||||| ||| | | | ||||| |||| Sbjct 172892 AATACCTTCCTTGTCC-TGAATCTTCGCTTTGA-CGTTGTCGATGGTGTCCGAGCTC--- 172946 Query 43131 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || | |||||||| ||||| || || || || || ||||||||||| Sbjct 172947 TCGACCTCCAGAGTGATGGTCTTGCCGGTCAGTGTTTTCACGAAGATTTGCAT 172999 Score = 102 bits (112), Expect = 9e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| | ||| | ||| | ||||| || ||| || || ||||| || || ||| Sbjct 173229 CCTCCTCTGAGACGGAGCACAAGATGCAGGGTAGACTCTTTCTGTATATTATAGTCTGCC 173288 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| ||| | || || ||||||||||| ||||| || | | |||||| || | || Sbjct 173289 AGAGTTCGCCCATCTTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGATCAGGAGGG 173348 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | | || |||||| |||||| |||| ||| | | | ||||||| |||||| Sbjct 173349 ATTCCTTCTTTGTCCTGGATTTTCGCCTTGA-CGTTGTCGATCGTGTCGGAGCTTTCCAC 173407 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || ||||| ||||| || | ||||| ||||| || ||||| Sbjct 173408 CTCTAAAGTAATGGTCTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 173455 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | | |||||||||||| | || |||||| || || |||||||| ||| Sbjct 173685 CCGCCTCTCAGTCTCAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCC 173744 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || |||||||| || || || || | | ||||||||| | || Sbjct 173745 AGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGG 173804 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | ||||||||| || || ||| | | | | ||| || |||| ||| Sbjct 173805 ATCCCCTCCTTGTCTTGAATCTTAACTTTCACATTATCGATCGTATCGGAGCTC---TCC 173861 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||||||| || ||||| |||||||| || || || ||||| Sbjct 173862 ACCTCCAACGTGATGGTCTTCCCCGTCAGCGTCTTCACGAATATCTGCAT 173911 >seq2625 Length=346021 Score = 104 bits (114), Expect = 3e-17 Identities = 155/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||||||||| ||||||||||| || |||||||| || |||| | | || | || || Sbjct 280175 ACCAAATGCAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCCAAACTGCGACCATCCTCG 280116 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 || ||||| || ||||| || | ||||||||||| | || | || |||||||||| | Sbjct 280115 AGTTGCTTGCCGGCGAAAATCAACCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 280056 Query 43095 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGT 43150 ||||| |||| ||| | | | || ||| ||| || || || | ||||| || Sbjct 280055 ATTTTGCTCTTGA-CGTTGTCGATGGTATCGGAACTC---TCGACCTCCAAAGTGATCGT 280000 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || || || || ||||| || ||||| ||||| || Sbjct 279999 CTTCCCTGTCAGAGTCTTCACGAAGATCTGCATCTT 279964 Score = 104 bits (114), Expect = 3e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||| | | |||||| | |||||| ||| ||| ||||| || ||||| || ||| Sbjct 280421 CCTCCTCGCAGCCTCAACACAAGATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCGGCC 280362 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || |||| || || || ||||| ||||| || | ||||||||||| | || Sbjct 280361 AGCGTGCGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCGCTGCTGGTCAGGGGGA 280302 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | || |||||| | | ||| |||| || || | | | | ||| || ||| ||| Sbjct 280301 ATGCCCTCCTTAT-CTTGAATTTTCGTCTTCACATTGTCGATCGTATCAGAGCT---TTC 280246 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| || ||||| || ||||| || ||||| ||||| Sbjct 280245 GACCTCAAGAGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 280195 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | | ||| |||||||| | || |||||||||||| ||||| || || Sbjct 282018 TCCTCCCCTCAGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGC 281959 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| || || ||||| || || || || | | |||||| || | || Sbjct 281958 CAAGGTACGACCGTCCTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGG 281899 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131 | || ||||||||| ||| | || |||| ||| | | | |||||| |||| | Sbjct 281898 GATGCCTTCCTTGTCC-TGAATCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTC---T 281843 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || | |||||||| || || || | ||||| ||||| || ||||| Sbjct 281842 CCACCTCAAGAGTGATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCAT 281791 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || || | || ||| | ||||| || ||| ||||| || ||||| || || Sbjct 280877 CCTCCCCTCAACCTCAGCACAAGATGCAGAGTCGACTCTTTTTGGATGTTGTAGTCCGCG 280818 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || | |||||| || || || || | | |||||| || | || Sbjct 280817 AGGGTACGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGCTGATCTGGAGGG 280758 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTC---GCTCGATTC 43132 | | |||||||||| ||| |||| |||| || | || ||||| ||| ||| Sbjct 280757 ATTCCCTCCTTGTCC-TGAATTTTGGTTTTCACGATGTCAATTGTGTCAGAGCT---TTC 280702 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||||||| ||||| |||||||| || ||||| ||||| Sbjct 280701 GACCTCCAACGTGATGGTTTTCCCCGTGAGCGTCTTCACGAAGATCTGCAT 280651 Score = 86.0 bits (94), Expect = 7e-12 Identities = 109/149 (73%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| | | || ||||||||||| || |||||||| || |||||||| || Sbjct 281561 CCTCCTCTCAGCCTCAGGACCAAATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGGCG 281502 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || ||||| | || || ||||| || || || || || | || ||||||||| | || Sbjct 281501 AGTGTCCGACCATCTTCAAGCTGTTTCCCGGCAAAAATCAATCTCTGCTGGTCTGGAGGA 281442 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 | | |||||||| | ||| |||| |||| Sbjct 281441 ATTCCCTCCTTGT-CTTGAATTTTGGTTT 281414 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | | ||| |||||||| | || |||||||| || ||||| || ||| Sbjct 281789 CCACCTCTCAGCCTCAAAACCAAATGGAGGGTAGATTCCTTTTGGATGTTGTAGTCGGCC 281730 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | |||| | | || || || ||||| || || || || | | |||||| || | || Sbjct 281729 AACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGGG 281670 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCAC-CGTGTC---GCTCGATTC 43132 | || ||||||||| ||| | || |||| ||| || |||||| |||| || Sbjct 281669 ATGCCTTCCTTGTCC-TGAATCTTCGTTTTCACGTTATCAATCGTGTCAGAGCTC---TC 281614 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || | || ||||| ||||| || || || || || ||||||||||| Sbjct 281613 CACCTCAAGAGTTATGGTCTTGCCGGTGAGGGTTTTAACGAAGATTTGCAT 281563 >seq3072 Length=975934 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | | |||||||||||| | || || ||||| || ||||| || ||| Sbjct 271581 CCACCTCTCAGCCTCAACACCAAATGGAGGGTAGATTCGTTTTGGATGTTGTAGTCGGCC 271522 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | |||| | | || || || ||||| || || || || | | |||||| || | || Sbjct 271521 AACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGGG 271462 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | || ||||||||| ||| | || |||| ||| | | | |||||| |||| || Sbjct 271461 ATGCCTTCCTTGTCC-TGAATCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTC---TC 271406 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || | || ||||| |||||||| || | || || ||||||||||| Sbjct 271405 CACCTCAAGAGTTATGGTCTTGCCCGTGAGGGCTTTAACGAAGATTTGCAT 271355 >seq824 Length=416372 Score = 82.4 bits (90), Expect = 9e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| |||| || |||||| || || ||||| || || || || || | || || Sbjct 212153 CACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCTTC 212094 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| |||||||| || | |||||||||||| | || | | |||||||||| Sbjct 212093 AAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTG 212034 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | | | | ||||| || ||||| |||| ||||| || || Sbjct 212033 GATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTT 211974 Query 43154 GCCCGTTA 43161 |||||||| Sbjct 211973 GCCCGTTA 211966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571788029882360