Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq2625 149 5e-31 seq487 127 2e-24 seq4017 122 7e-23 seq4073 116 3e-21 seq3072 95.1 1e-14 seq824 95.1 1e-14 seq3627 91.5 1e-13 >seq2625 Length=346021 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || || | || ||| | ||||| ||||| |||||||||||||| || ||||||||| | Sbjct 280193 CCTCCACGCAGTCTCAGAACCAAATGCAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCC 280134 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 | |||| | || || ||||| || |||||||| ||||||||||| ||||| || || Sbjct 280133 AAACTGCGACCATCCTCGAGTTGCTTGCCGGCGAAAATCAACCGCTGCTGGTCAGGGGGG 280074 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||||||||| ||||| ||| || | | | | || || ||| ||| Sbjct 280073 ATGCCCTCCTTGTCCTGGATTTTGCTCTTGACGTTGTCGATGGTATCGGAACTCTCGACC 280014 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 |||| || |||||||| || |||||||||||||| ||||| ||||| || Sbjct 280013 TCCAAAGTGATCGTCTTCCCTGTCAGAGTCTTCACGAAGATCTGCATCTT 279964 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||| || |||||||| | || | || |||||| ||| |||||||||||||||||| Sbjct 280650 GCCTCCCCTCAATCTCAGAACAAGATGAAGCGTGGACTCTTTCTGAATGTTGTAGTCGGC 280591 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 ||| || |||| || |||||||| |||||||| ||||||| ||| || || || || Sbjct 280590 CAGCGTCCGGCCGTCCTCTAGTTGTTTGCCGGCGAAGATCAACCTCTGCTGATCTGGGGG 280531 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||| ||| || || ||| || | | | |||| || ||| || Sbjct 280530 GATTCCCTCCTTATCCTGGATCTTAGTCTTGACATTGTCGATGGTGTCAGAACTCTCGAC 280471 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| | |||||| || || ||||||||||| || || || |||||||| Sbjct 280470 CTCGAGGGTAATGGTTTTCCCCGTCAGAGTTTTAACGAAAATTTGCAT 280423 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || || |||| || || ||||| || || || |||||| ||||||||||||||| | Sbjct 282017 CCTCCCCTCAGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCC 281958 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 | ||| |||| || ||||| ||||| || || ||||||| ||| || || ||||| Sbjct 281957 AAGGTACGACCGTCCTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGG 281898 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCAC 45288 | || ||||||||| || | || | || || | || | |||| | |||||| Sbjct 281897 ATGCCTTCCTTGTCCTGAA-TCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTCTCCAC 281839 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| | || || ||||| || |||| ||||||||||| || ||||| Sbjct 281838 CTCAAGAGTGATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCAT 281791 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || |||| || || || || | |||| ||| ||| || || |||||||||||| | Sbjct 280421 CCTCCTCGCAGCCTCAACACAAGATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCGGCC 280362 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || |||| |||| || |||||||| |||||||| ||||||||||| ||||| || || Sbjct 280361 AGCGTGCGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCGCTGCTGGTCAGGGGGA 280302 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||||| || |||||| ||| || | | | || | || ||| Sbjct 280301 ATGCCCTCCTTATCTTGAATTTTCGTCTTCACATTGTCGATCGTATCAGAGCTTTCGACC 280242 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | || || ||||| ||||| || ||||| || ||||| ||||| Sbjct 280241 TCAAGAGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 280195 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || ||||||| || | ||||| |||| || ||||| || |||||||| ||| Sbjct 281561 CCTCCTCTCAGCCTCAGGACCAAATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGGCG 281502 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| ||| | || || || ||||| ||||| || ||||| | ||| ||||| ||||| Sbjct 281501 AGTGTCCGACCATCTTCAAGCTGTTTCCCGGCAAAAATCAATCTCTGCTGGTCTGGAGGA 281442 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||||||||| |||||| || || | | | |||| || ||| ||| Sbjct 281441 ATTCCCTCCTTGTCTTGAATTTTGGTTTTCACATTGTCAATGGTGTCGGAACTCTCAACC 281382 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| |||||||||||||| |||| || || || || || ||||| Sbjct 281381 TCCAAAGTAATCGTCTTGCCAGTCAAGGTTTTGACGAAAATCTGCAT 281335 >seq487 Length=466406 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || || ||||| | | |||| || || ||| |||||||| |||||||||||| Sbjct 176122 CCTCCCCTCAACCGAAGCACCAGATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCGGCA 176063 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| |||| || ||||| || |||||||| |||| || ||| ||||| ||||| Sbjct 176062 AGGGTGCGTCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCAGGAGGA 176003 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||||||||| |||||| ||| || | | | | || | | ||| ||| Sbjct 176002 ATTCCCTCCTTGTCCTGAATTTTAACCTTCACATTGTCGATGGTATCACTGCTCTCGACC 175943 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || | || || ||||| ||||||||||||||||| ||||| |||||| Sbjct 175942 TCGAGCGTGATGGTCTTCCCCGTCAGAGTCTTCACGAAGATCTGCATG 175895 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||| |||| ||| ||| || ||||||||||| ||| |||| ||| | || Sbjct 183544 AACACCAGATGCAACGTCGACTCTTTTTGAATGTTGTAATCGGCCAGTGTACGACCATCT 183485 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 ||||| || || || ||||| ||||| ||||| ||||||||||| | |||||||||||| Sbjct 183484 TCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCGGGAGGAATTCCCTCCTTGTCC 183425 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||||| || || | | | |||| | |||||| |||| || || || Sbjct 183424 TGGATTTTGGCTTTCACATTGTCGATGGTGTCAGAGCTCTCCACTTCCAGAGTGATGGTT 183365 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||||||||||||| || ||||||||||| Sbjct 183364 TTCCCCGTCAGAGTCTTGACGAAGATTTGCAT 183333 Score = 118 bits (130), Expect = 8e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || || ||||| | | |||||||| || ||| ||||||||| |||||||| || Sbjct 182324 CCTCCCCTCAACCGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCA 182265 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| |||| || || || ||||| || || ||||||| ||| ||||| || || Sbjct 182264 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 182205 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||||| ||| ||| || ||| || | | | | || | | ||| ||| Sbjct 182204 ATTCCCTCCTTATCCTGAATCTTGGCCTTCACATTGTCGATGGTATCGCTGCTCTCGACC 182145 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || | || || ||||| |||||||| |||||||||||||| |||||||| Sbjct 182144 TCGAGCGTGATGGTCTTTCCCGTCAGCGTCTTCACAAAGATCTGCATGTT 182095 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| |||||| || ||||||||||| || ||| |||| || Sbjct 182534 ACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCGTCTTCG 182475 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| ||||||| ||| ||||| || || | |||||||||||| | Sbjct 182474 AGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGA 182415 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | |||||||||| ||||| ||||| Sbjct 182414 ATCTTGGCCTTCACATTATCGATGGTGTCGGAGCTTTCCACCTCCAGAGTAATTGTCTTA 182355 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || |||||||| ||||| ||||| Sbjct 182354 CCCGTGAGGGTCTTCACGAAGATCTGCAT 182326 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || |||||||| | | ||||| || || ||| |||||| || ||||||||||| Sbjct 182780 CCTCCTCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCG 182721 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || || || || || || ||||| |||| || ||| ||||| || || Sbjct 182720 AGAGTGCGGCCATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 182661 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| |||||| ||| || ||||| |||| | |||||| Sbjct 182660 ATCCCTTCCTTGTCCTGGATTTTTGCCTTCACGTTGTCCACGGTGTCGGAGCTTTCCACC 182601 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | || |||||||| || || || |||||||| ||||||||||| Sbjct 182600 TCGAGAGTGATCGTCTTTCCTGTGAGGGTCTTCACGAAGATTTGCAT 182554 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || || ||||| | | |||||||| || || |||||| || ||||||||||| Sbjct 176350 CCTCCCCTCAACCGAAGCACCAAGTGAAGAGTCGACTCCTTTTGGATGTTGTAGTCCGCG 176291 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || |||| |||| ||| || || ||||| |||| || ||| ||||| || || Sbjct 176290 AGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGA 176231 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCAC 45288 | |||||||||||| || | || |||| || | | | | |||| | |||||| Sbjct 176230 ATTCCCTCCTTGTCCTGAA-TCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCAC 176172 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| | ||| || |||||||| ||||||||||| || ||||| ||||| Sbjct 176171 CTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 176124 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || |||||||| | | ||||| || || || ||||| || ||||||||||| Sbjct 176578 CCTCCTCTCAAACGAAGAACCAAATGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGCA 176519 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || || |||| |||| ||| || || ||||| |||| || ||| ||||| || || Sbjct 176518 AGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGA 176459 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||||||||| || || ||| || | | | |||| | || ||| Sbjct 176458 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCAACC 176399 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || |||||||||||||| || |||||||| ||||||||||| Sbjct 176398 TCCAAAGTGATCGTCTTGCCCGTGAGGGTCTTCACGAAGATTTGCAT 176352 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || ||||||||||||||||||||| || ||| | || || Sbjct 177700 ACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCGAGGGTGCGGCCATCTTCG 177641 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| |||| || ||| ||||| || || | || ||||||||| | Sbjct 177640 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGA 177581 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||| | || ||||||| || || |||||| Sbjct 177580 ATCTTGGCCTTCACATTATCGATCGTATCCGAGCTTTCTACCTCCAGAGTGATGGTCTTG 177521 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||||||||| || ||||||||||| Sbjct 177520 CCGGTCAGAGTCTTGACGAAGATTTGCAT 177492 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| |||||| || ||||||||||| || ||| | || || Sbjct 182990 ACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCGAGGGTACGACCATCTTCG 182931 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| ||||| | || || || ||||| | |||||||||||| | Sbjct 182930 AGCTGCTTACCAGCGAAGATCAATCTTTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGA 182871 Query 45248 ATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 | | || |||| | || | | | |||| | |||||| |||| || ||||| || Sbjct 182870 A-TCTTAGCTTTAACGTTGTCGATAGTGTCGGAGCTCTCCACTTCCAGAGTGATCGTTTT 182812 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| ||||| || || || ||||| ||||| Sbjct 182811 GCCGGTCAGCGTTTTTACGAAGATCTGCAT 182782 >seq4017 Length=874442 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||| || || || | ||| || || |||||| ||||||||||||||| | Sbjct 472657 CCACCTCTCAACCTCAACACGAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCC 472598 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || | | |||| || || ||||| || ||||| ||||| ||||| ||||| || || Sbjct 472597 AGAGTTCTACCGTCCTCAAGCTGTTTACCTGCGAAGATCAAACGCTGCTGGTCTGGGGGA 472538 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||||||| || || || ||| || | | | |||| || ||| ||| Sbjct 472537 ATACCCTCCTTATCTTGGATCTTAGTCTTCACATTATCGATGGTGTCGGAACTCTCAACC 472478 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | ||||| ||||| || |||| ||||| || ||||||||||| Sbjct 472477 TCGAGAGTAATGGTCTTTCCTGTCAACGTCTTGACGAAGATTTGCAT 472431 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||| || | || | ||| || || |||||| || |||||||||||| | Sbjct 473113 CCACCTCTCAACCTCAGGACGAGGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGCC 473054 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || | | || || || || || |||||||| ||||| ||||| || || ||||| Sbjct 473053 AGGGTCCTTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCTGGAGGA 472994 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||||||| || ||||| ||| || | | |||| || ||||||| Sbjct 472993 ATACCCTCCTTATCTTGGATTTTAGTCTTCACATTGTCGATAGTGTCAGAACTCTCCACC 472934 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || |||||||| |||||||||||||| || || ||||| Sbjct 472933 TCCAAGGTTATAGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 472887 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| |||| ||| || |||||||||| || |||||| || ||||| || || | Sbjct 472201 CCACCCCTCAGTCTCAAGACCAAGTGCAATGTAGACTCCTTTTGGATGTTATAATCAGCC 472142 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 | | | | || || ||||| || |||||||| |||| || ||| ||||||||||| Sbjct 472141 AATGTCCTCCCATCCTCGAGTTGCTTGCCGGCGAAAATCAGCCTCTGCTGGTCGGGAGGA 472082 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||||||||||| ||| || |||||| | | | || | || ||| Sbjct 472081 ATACCCTCCTTGTCCTGAATCTTGGTCTTAACATTGTCGATCGTATCGGAGCTTTCGACC 472022 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || | || || ||||| ||||||| |||||||||||||| ||||| ||| Sbjct 472021 TCAAGAGTGATGGTCTTCCCCGTCAATGTCTTCACAAAGATCTGCATCTTG 471971 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||| | || || | || || || |||||| || ||||| |||||| | Sbjct 473341 CCACCTCTCAACCGCAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTATAGTCGGCC 473282 Query 45170 A--GTTG-GCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGA 45226 | || || ||| ||| || ||||| || ||||| ||||| ||||| ||||| || Sbjct 473281 AAAGTCCTGCCATCTTCG---AGCTGTTTCCCAGCGAAGATCAATCGCTGCTGGTCTGGG 473225 Query 45227 GGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCC 45286 || | || |||||||| |||||| ||| || | | | |||| || |||| Sbjct 473224 GGAATGCCTTCCTTGTCTTGAATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTCTCC 473165 Query 45287 ACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||||| ||| || |||||||| |||||||||||||| || || ||||| Sbjct 473164 ACCTCCAAGGTGATGGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 473115 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || ||||||| || | ||| | || || ||| |||||| || |||||||||||| Sbjct 472885 CCTCCTCTCAGCCTCAGTACGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCA 472826 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || | |||| || || || || || ||||| || | ||||| ||||| ||||| Sbjct 472825 AGGGTCCTCCCGTCCTCAAGCTGCTTGCCTGCGAAGATTAGTCGCTGCTGGTCTGGAGGG 472766 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||||||||| ||||| ||| || | | | |||| || ||||||| Sbjct 472765 ATACCCTCCTTGTCTTGGATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTCTCCACC 472706 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || |||||||| |||| |||||||| ||||| ||||| Sbjct 472705 TCCAAGGTGATGGTCTTGCCAGTCAATGTCTTCACGAAGATCTGCAT 472659 >seq4073 Length=488838 Score = 116 bits (128), Expect = 3e-21 Identities = 157/212 (74%), Gaps = 9/212 (4%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA---GTTGGCGATCGTCGT 45185 |||| ||||| ||| ||| ||||||||||| || || | || ||| || | || | Sbjct 172792 CAAGATGCAGGGTGGACTCTTTCTGAATGTTATAATC-TGCAAGAGTTCGCC--CATCTT 172848 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 | ||||| || |||||||| ||||||| ||| || |||||||| | ||| ||||||||| Sbjct 172849 CGAGTTGCTTACCGGCGAAGATCAACCTCTGCTGATCGGGAGGAATACCTTCCTTGTCCT 172908 Query 45246 CAATTTTTTGCTTAACCGCCGCC-ACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || |||| || | | | | ||||| | ||| ||||||| || || ||| Sbjct 172909 GAATCTTC-GCTTTGACGTTGTCGATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTC 172967 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| ||||| || ||||| ||||||||||| Sbjct 172968 TTGCCGGTCAGTGTTTTCACGAAGATTTGCAT 172999 Score = 114 bits (126), Expect = 1e-20 Identities = 153/209 (73%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| ||||| ||| ||| ||||||||||| || || ||| || | || || | Sbjct 173020 CAAGATGCAGGGTGGACTCTTTCTGAATGTTATAATCTGCCAGAGTTCGCCCATCTTCGA 173079 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || |||||||| ||||||| ||| ||||||||||| | ||| ||||||||| || Sbjct 173080 GCTGCTTACCGGCGAAGATCAACCTCTGCTGGTCGGGAGGAATACCTTCCTTGTCCTGAA 173139 Query 45249 TTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 | || |||| || | | | | ||||| | ||| ||||||| || || |||||| Sbjct 173140 -TCTTCGCTTTGACGTTGTCGATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTCTTG 173198 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| || ||||| ||||||||||| Sbjct 173199 CCGGTCAATGTTTTCACGAAGATTTGCAT 173227 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || ||||||| ||| || ||||| || || || ||||||||| |||||||| || | Sbjct 173685 CCGCCTCTCAGTCTCAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCC 173744 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || |||| | || || || || || ||||| || ||||||| ||| ||||| ||||| Sbjct 173745 AGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGG 173804 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||||||||| ||| || || || | | | || | ||||||| Sbjct 173805 ATCCCCTCCTTGTCTTGAATCTTAACTTTCACATTATCGATCGTATCGGAGCTCTCCACC 173864 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || || ||||| |||||||| |||||||| || || ||||| Sbjct 173865 TCCAACGTGATGGTCTTCCCCGTCAGCGTCTTCACGAATATCTGCAT 173911 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || ||||| | || || ||||| || ||||| ||||| || |||||||| || | Sbjct 173457 CCTCCTCTGAGCCTCAAAACCAAATGAAGCGTCGATTCCTTTTGGATGTTGTAATCCGCC 173516 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || |||| | || || || || || ||||| || |||| || ||| ||||| ||||| Sbjct 173517 AGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 173576 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||||||||| |||||| ||| || | | |||| | ||| ||| Sbjct 173577 ATCCCCTCCTTGTCCTGAATTTTGACCTTCACATTGTCGATCGTGTCAGAGCTCTCGACC 173636 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCTC 45344 |||| || || ||||| || |||| ||||| || || || ||||| ||||| Sbjct 173637 TCCAACGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCATCCCGCCTC 173691 >seq3072 Length=975934 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| || || ||||| || || || || || || |||||||||||| | Sbjct 271581 CCACCTCTCAGCCTCAACACCAAATGGAGGGTAGATTCGTTTTGGATGTTGTAGTCGGCC 271522 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 | | | || || ||||| |||||||| || ||||||| ||| || || ||||| Sbjct 271521 AACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGGG 271462 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCAC 45288 | || ||||||||| ||| || || || | | || | |||| | |||||| Sbjct 271461 ATGCCTTCCTTGTCCTGAATCTTCGTTTTCAC-GTTGTCAATCGTGTCAGAGCTCTCCAC 271403 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||| | || || ||||||||||| || | || || |||||||||||| Sbjct 271402 CTCAAGAGTTATGGTCTTGCCCGTGAGGGCTTTAACGAAGATTTGCATG 271354 >seq824 Length=416372 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| || ||||||||| |||||||||||| || |||| | || || Sbjct 212152 ACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCTTCA 212093 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| ||||| ||||| ||||| || || | |||||||||||| Sbjct 212092 AGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGG 212033 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||||||||| | ||| || |||||| Sbjct 212032 ATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTG 211973 Query 45308 CCCGT 45312 ||||| Sbjct 211972 CCCGT 211968 >seq3627 Length=715207 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||| ||||||||||||||| || |||| | || ||||| || || || ||||| Sbjct 381924 CTCCTTTTGAATGTTGTAGTCGGCAAGAGTGCGACCATCTTCCAGCTGCTTGCCCGCGAA 381865 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||| ||||| || || ||||| | |||||||||||| || || ||| || Sbjct 381864 GATCAATCGCTGCTGATCCGGAGGAATCCCCTCCTTGTCCTGGATCTTGGTCTTCACATT 381805 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | | | | ||| | ||||||||| | ||| || ||||||||||| Sbjct 381804 GTCGATGGTATCCGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGT 381757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395055280431877