Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4017 138 1e-27 seq487 129 5e-25 seq2625 111 1e-19 seq4073 102 7e-17 >seq4017 Length=874442 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||||||||||||||| || |||||| | || || || ||| Sbjct 473115 ATGCAGATTTTCGTGAAGACTCTGACAGGCAAGACCATCACCTTGGAGGTGGAGAGTTCC 473174 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | ||| |||||||||||| | || || |||||| Sbjct 473175 GACACCATCGACAATGTGAAGACCAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAG 473234 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || |||||||| |||||| | ||||| | |||| || ||| |||||| Sbjct 473235 CAGCGATTGATCTTCGCTGGGAAACAGCTCGAAGATGGCAGGACTTTGGCCGACTATAAC 473294 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || ||||| || || ||||||||||| || Sbjct 473295 ATCCAAAAGGAGTCTACTCTTCATCTTGT 473323 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || |||||| | || || || ||| Sbjct 472659 ATGCAGATCTTCGTGAAGACATTGACTGGCAAGACCATCACCTTGGAGGTGGAGAGTTCC 472718 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | ||| |||||||| || | || || |||||| Sbjct 472719 GACACCATCGACAATGTGAAGACCAAAATCCAAGACAAGGAGGGTATCCCTCCAGACCAG 472778 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| ||||| ||||| ||||| ||| | || ||| | ||| | ||| || ||| Sbjct 472779 CAGCGACTAATCTTCGCAGGCAAGCAGCTTGAGGACGGGAGGACCCTTGCCGACTACAAC 472838 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || || |||||||| ||||| || ||||| || |||| Sbjct 472839 ATCCAAAAGGAGTCCACCCTTCATCTCGTACTGAGGCTGAGAGGAGGTA 472887 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || || ||| |||| || || || Sbjct 472203 ATGCAGATCTTCGTCAAGACTTTGACGGGTAAGACAATTACCCTCGAGGTGGAGAGCTCT 472262 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | ||| || ||||| || | || || |||||| Sbjct 472263 GACACCATCGACAATGTAAAGACTAAAATTCAAGATAAGGAGGGTATTCCCCCAGACCAG 472322 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||| ||| | || || | ||| || ||||| ||| Sbjct 472323 CAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGAAGGACGCTGGCTGATTACAAC 472382 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || || ||||| ||||| || |||||||| || |||| Sbjct 472383 ATCCAAAAGGAGTCCACCCTTCACCTGGTTCTGAGACTGAGAGGAGGTA 472431 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| ||||||| || || || || |||| ||||| ||| Sbjct 472431 ATGCAAATCTTCGTCAAGACGTTGACAGGAAAGACCATTACTCTCGAGGTTGAGAGTTCC 472490 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || ||| | || ||||| || | || || ||||| Sbjct 472491 GACACCATCGATAATGTGAAGACTAAGA-TCCAAGATAAGGAGGGTATTCCCCCAGACCA 472549 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || ||||| || |||||| | || ||| || ||| || ||| || || Sbjct 472550 GCAGCGTTTGATCTTCGCAGGTAAACAGCTTGAGGACGGTAGAACTCTGGCCGACTACAA 472609 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||||||| || || || || || || || | || |||| || |||| Sbjct 472610 CATTCAAAAGGAGTCTACCCTCCACCTCGTGTTGAGGTTGAGAGGTGGTA 472659 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||||||||||||||| || || ||| | || || || || Sbjct 472887 ATGCAGATTTTCGTGAAGACTCTGACAGGCAAGACTATAACCTTGGAGGTGGAGAGTTCT 472946 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || | ||| || ||||| || | || || || ||| Sbjct 472947 GACACTATCGACAATGTGAAGACTAAAATCCAAGATAAGGAGGGTATTCCTCCAGATCAG 473006 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||| ||||| ||| | ||||| | ||| || ||| || ||| Sbjct 473007 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAAGATGGAAGGACCCTGGCCGACTACAAC 473066 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || || ||||| || || || || |||| || |||| Sbjct 473067 ATCCAAAAGGAGTCTACCCTTCACCTCGTCCTGAGGTTGAGAGGTGGTA 473115 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || || || ||||| |||| || ||| || Sbjct 473571 ATGCAGATCTTCGTGAAGACCTTGACCGGGAAGACTATCACTCTCGAGGTCGAAAGCTCT 473630 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || |||||||||||| | || ||||| ||| Sbjct 473631 GACACCATCGACAATGTCAAAACCAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAG 473690 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||| | | || || || || || ||| ||||||| | | | || || ||||| || Sbjct 473691 CAGAGATTGATCTTTGCAGGAAAGCAGCTGGAAGA-TGGACGAACCCTGGCGGATTACAA 473749 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || ||||||||||| ||||| ||||| || || || ||| | || ||| Sbjct 473750 TATCCAAAAAGAATCAACTCTGCATCTTGTTCTGAGGCTGCGAGGTGGT 473798 Score = 89.7 bits (98), Expect = 5e-13 Identities = 161/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || || || ||||| |||| || || || ||||| | || || ||| Sbjct 471972 AAGATGCAGATCTTTGTGAAGACATTGACGGGGAAGACCATCACTCTTGAGGTCGAAAGC 472031 Query 31250 TCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||| | |||| | || || || ||| | ||||||||| || | || ||||| Sbjct 472032 TCCGATACGATCGACAATGTTAAGACCAAGATTCA-GGACAAGGAGGGTATTCCTCCCGA 472090 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||| | || || ||||| ||||| || | || || | ||| || ||||| Sbjct 472091 CCAGCAGAGGCTGATTTTCGCCGGCAAGCAACTCGAGGATGGGAGGACATTGGCTGATTA 472150 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| ||||| || || || | || |||| | ||||||||||| |||| Sbjct 472151 TAACATCCAAAAGGAGTCTACATTGCACTTGGTCTTGAGACTGAGGGGTGGTA 472203 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| || ||||| ||||| | || |||||| || Sbjct 473343 ATGCAGATCTTTGTCAAGACATTGACTGGAAAAACCATCACTTTGGAGGTTGAAAGCTCA 473402 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | || || ||| ||| | ||| ||||| || | || |||||||| Sbjct 473403 GATACCATCGACAACGTGAAGACAAAGA-TCCAGGATAAGGAGGGTATTCCTCCCGACCA 473461 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || || || || || ||| | || || | || || || ||||| Sbjct 473462 GCAGCGATTGATCTTTGCCGGTAAGCAGCTCGAGGATGGTCGTACCTTGGCAGACTATAA 473521 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| ||||| || | ||||| || || || ||||||| |||| Sbjct 473522 TATTCAAAAGGAATCTACCTTGCATCTTGTGCTACGATTGAGGGGAGGTA 473571 >seq487 Length=466406 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||||||||| || ||||| ||||| | || || || || Sbjct 183333 ATGCAAATCTTCGTCAAGACTCTGACGGGGAAAACCATCACTCTGGAAGTGGAGAGCTCT 183392 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| | ||| ||||||||| || | || ||||||||| Sbjct 183393 GACACCATCGACAATGTGAAAGCCAAAATCCAGGACAAGGAGGGAATTCCTCCCGACCAG 183452 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||||||||| ||| ||||||| | || || |||||| ||| Sbjct 183453 CAGCGATTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACACTGGCCGATTACAAC 183512 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||||||||| ||||| | |||||||| Sbjct 183513 ATTCAAAAAGAGTCGACGTTGCATCTGGT 183541 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| ||||| || |||||| |||| || || ||| Sbjct 176124 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTGGAGAGCTCC 176183 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| | || ||||||||| || | || || |||||| Sbjct 176184 GACACCATCGACAACGTGAAAGCTAAGATTCAGGACAAGGAGGGAATTCCCCCAGACCAG 176243 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||||||||| || ||||||||| ||| | || || ||| Sbjct 176244 CAGAGGCTGATTTTCGCTGGCAAGCAATTGGAAGACGGCCGAACTCTCGCGGACTACAAC 176303 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| || ||||||||||| |||| ||| | ||||||| || Sbjct 176304 ATCCAAAAGGAGTCGACTCTTCACTTGGTGCTTCGGTTGAGGGGAGG 176350 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| |||||||| |||||| |||| || || ||| Sbjct 176808 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAAACCATCACCCTCGAGGTGGAGAGCTCC 176867 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | |||||| | || ||||||||| || | || || |||||| Sbjct 176868 GACACTATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAG 176927 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || ||||| || || ||||||||||| || | || || ||| Sbjct 176928 CAGAGGTTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGCACCCTCGCAGACTACAAC 176987 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || ||||| ||| |||| ||| | |||||||| |||| Sbjct 176988 ATCCAAAAGGAGTCTACTCTCCATTTGGTGCTTCGTCTGAGGGGAGGTA 177036 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| |||||||| | || |||||| ||| Sbjct 176352 ATGCAAATCTTCGTGAAGACCCTCACGGGCAAGACGATCACTTTGGAGGTTGAAAGCTCC 176411 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| || | || || |||||| Sbjct 176412 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAG 176471 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||||||||| || ||||||||| ||| | || || ||| Sbjct 176472 CAGAGGCTGATCTTCGCTGGCAAGCAATTGGAAGACGGCCGAACTCTTGCGGACTACAAC 176531 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| ||||| ||||| ||| |||| ||| | |||| || |||| Sbjct 176532 ATCCAAAAGGAATCAACTCTCCATTTGGTTCTTCGTTTGAGAGGAGGTA 176580 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || |||||||| || ||||| |||||||||||||| | || || || ||| Sbjct 182782 ATGCAGATCTTCGTAAAAACGCTGACCGGCAAAACGATCACTCTGGAAGTGGAGAGCTCC 182841 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| |||| | || | || || ||||||||| ||| | || || || || Sbjct 182842 GACACTATCGACAACGTTAAAGCTAAG-ATTCAGGACAAGGAGGGCATTCCTCCTGATCA 182900 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | | || |||||||| || ||| | ||||| | || | || || || Sbjct 182901 GCAAAGATTGATCTTCGCTGGTAAGCAGCTCGAAGATGGTCGTACCCTCGCAGACTACAA 182960 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| ||||| || || ||||| ||| |||| ||| | || ||||| |||| Sbjct 182961 CATCCAAAAGGAGTCCACTCTCCATTTGGTGCTTCGTCTCAGGGGAGGTA 183010 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||||||||| ||||| || ||||| | || || ||| || Sbjct 177492 ATGCAAATCTTCGTCAAGACTCTGACCGGCAAGACCATCACTCTGGAGGTAGAAAGCTCG 177551 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || | || |||||||||||| | || || |||||| Sbjct 177552 GATACGATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATTCCCCCAGACCAG 177611 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||||||||| ||| | ||||| || | || || ||| Sbjct 177612 CAGAGGCTGATCTTCGCTGGCAAGCAGCTCGAAGATGGCCGCACCCTCGCAGACTACAAC 177671 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || ||||| ||| |||| ||| | |||||||| || Sbjct 177672 ATTCAGAAGGAGTCTACTCTCCATTTGGTGCTTCGTCTGAGGGGAGG 177718 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || ||||| || |||||||| |||| || ||| ||| Sbjct 182554 ATGCAAATCTTCGTGAAGACCCTCACAGGAAAGACGATCACTCTCGAGGTGGAAAGCTCC 182613 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || || | || || | ||| |||||||||||| | || || |||||| Sbjct 182614 GACACCGTGGACAACGTGAAGGCAAAAATCCAGGACAAGGAAGGGATTCCACCAGACCAG 182673 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || |||||||| || ||| | ||||| ||| | || || ||| Sbjct 182674 CAGAGGCTGATCTTCGCTGGTAAGCAGCTCGAAGATGGCCGCACTCTCGCAGACTACAAC 182733 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || ||||| || || ||||| ||| |||| || Sbjct 182734 ATCCAAAAGGAGTCCACTCTCCATTTGGTGCT 182765 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || ||| |||| || || |||||||| | || || ||| || Sbjct 177264 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACGATCACTCTTGAGGTAGAAAGCTCG 177323 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || ||| | || |||||||||||| | || || |||||| Sbjct 177324 GATACGATCGATAATGTGAAAGCTAAGATTCAGGACAAGGAAGGGATTCCCCCAGACCAG 177383 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || |||||||| || ||| | ||||| ||| | || || ||| Sbjct 177384 CAGAGGCTGATCTTCGCTGGAAAGCAGCTCGAAGATGGCCGAACTCTCGCGGACTACAAC 177443 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || ||||| ||| |||| || | || ||||| |||| Sbjct 177444 ATCCAGAAGGAGTCCACTCTCCATTTGGTGCTGCGTCTCAGGGGAGGTA 177492 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || |||||||| || || || ||||| | || || ||| || Sbjct 183010 ATGCAAATCTTCGTCAAAACTCTGACCGGAAAGACCATCACTCTGGAGGTGGAAAGCTCG 183069 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || |||||||||||| | || || |||||| Sbjct 183070 GACACGATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAAGGAATTCCACCAGACCAG 183129 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||| | || || ||||||||||| ||| | ||||| Sbjct 183130 CAGAGGCTGATCTTCGCTGGCAAGCAGCTCGAAGA 183164 >seq2625 Length=346021 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || |||||||| || ||||| || ||| |||| || || || Sbjct 280423 ATGCAAATTTTCGTTAAAACTCTGACGGGGAAAACCATTACCCTCGAGGTCGAGAGTTCT 280482 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || || || ||| ||||| || | || || || || Sbjct 280483 GACACCATCGACAATGTCAAGACTAAG-ATCCAGGATAAGGAGGGAATCCCCCCAGATCA 280541 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || ||||| |||||||| | || ||| ||| || ||| || || Sbjct 280542 GCAGAGGTTGATCTTCGCCGGCAAACAACTAGAGGACGGCCGGACGCTGGCCGACTACAA 280601 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||| ||||| || || |||||||| || || ||| ||||||| || Sbjct 280602 CATTCAGAAAGAGTCCACGCTTCATCTTGTTCTGAGATTGAGGGGAGG 280649 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || || ||||| ||||| | || || ||| || Sbjct 280650 CATGCAGATCTTCGTGAAGACGCTCACGGGGAAAACCATCACGTTGGAGGTCGAAAGCTC 280709 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || ||| | ||| ||||||||| || | || || || || Sbjct 280710 TGACACAATTGACATCGTGAAAACCAAAATTCAGGACAAGGAGGGAATCCCTCCAGATCA 280769 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || || ||||| ||||||||||| | || | || || || Sbjct 280770 GCAGAGGTTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGTACCCTCGCGGACTACAA 280829 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| |||||||| |||||||| ||||| || || || ||||||| || Sbjct 280830 CATCCAAAAAGAGTCGACTCTGCATCTTGTGCTGAGGTTGAGGGGAGG 280877 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| |||||||||||||| || |||||||| | || || || Sbjct 279964 AAGATGCAGATCTTCGTGAAGACTCTGACAGGGAAGACGATCACTTTGGAGGTCGAGAGT 280023 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||| | |||| | ||||| | ||| ||||||||| ||| | || || ||| Sbjct 280024 TCCGATACCATCGACAACGTCAAGAGCAAAATCCAGGACAAGGAGGGCATCCCCCCTGAC 280083 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| | || ||||| ||||| || | || || | | | || ||| || Sbjct 280084 CAGCAGCGGTTGATTTTCGCCGGCAAGCAACTCGAGGATGGTCGCAGTTTGGCCGACTAC 280143 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || ||||| ||| |||| || |||||| | || || Sbjct 280144 AATATCCAGAAGGAGAGCACTCTGCATTTGGTTCTGAGACTGCGTGGAGG 280193 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || ||||| | || || ||| || Sbjct 280195 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACCATCACTCTTGAGGTCGAAAGCTCT 280254 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || || ||| || ||||| ||| | || || |||||| Sbjct 280255 GATACGATCGACAATGTGAAGACGAAAATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 280314 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||| || ||||| | |||||| | || || ||| || ||| Sbjct 280315 CAGCGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGCACGCTGGCCGACTACAAC 280374 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || |||||||| || ||| | ||||| || | || ||| | || |||| Sbjct 280375 ATCCAAAAAGAGTCCACTTTGCATCTTGTGTTGAGGCTGCGAGGAGGTA 280423 >seq4073 Length=488838 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || || |||| ||||| || ||||| | || || || || Sbjct 173227 ATGCAAATCTTCGTGAAAACATTGACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCG 173168 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| || || |||||||||||| | || ||||||||| Sbjct 173167 GACACCATCGACAACGTCAAAGCGAAGATTCAGGACAAGGAAGGTATTCCTCCCGACCAG 173108 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || ||||| || || ||| | ||||| ||| || ||||||||| Sbjct 173107 CAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGATGGGCGAACTCTGGCAGATTATAAC 173048 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| || || || ||||| || || | || || || |||| Sbjct 173047 ATTCAGAAAGAGTCCACCCTGCATCTTGTCCTCCGTCTCAGAGGAGGTA 172999 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || || ||||| ||||| || ||||| | || || || || Sbjct 172999 ATGCAAATCTTCGTGAAAACACTGACCGGCAAGACCATCACTCTGGAGGTCGAGAGCTCG 172940 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| || || |||||||||||| | || ||||| ||| Sbjct 172939 GACACCATCGACAACGTCAAAGCGAAGATTCAGGACAAGGAAGGTATTCCTCCCGATCAG 172880 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || ||||| || || || | ||||| ||| | ||||||||| Sbjct 172879 CAGAGGTTGATCTTCGCCGGTAAGCAACTCGAAGATGGGCGAACTCTTGCAGATTATAAC 172820 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| || || || ||||| || || Sbjct 172819 ATTCAGAAAGAGTCCACCCTGCATCTTGTCCT 172788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445743348305040