Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq4073 154 3e-32 seq487 149 1e-30 seq2625 140 7e-28 seq3072 129 1e-24 seq4017 125 2e-23 seq1237 89.7 1e-12 >seq4073 Length=488838 Score = 154 bits (170), Expect = 3e-32 Identities = 179/238 (75%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 104325 TATTTA--TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 |||||| |||| ||||| || | || || ||||| | || || ||||||||||| || Sbjct 172763 TATTTACATTCCTCCTCTAAGACGGAGGACAAGATGCAGGGTGGACTCTTTCTGAATGTT 172822 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 ||| || | ||||||| || ||||| ||||| || || || || || | |||||| || Sbjct 172823 ATAATCTGCAAGAGTTCGCCCATCTTCGAGTTGCTTACCGGCGAAGATCAACCTCTGCTG 172882 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||| ||||| || ||||| || ||||||||||| ||||| || || || | ||| || | Sbjct 172883 ATCGGGAGGAATACCTTCCTTGTCCTGAATCTTCGCTTTGACGTTGTCGATGGTGTC-CG 172941 Query 104503 AGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || | || ||||| || || || ||||| || || |||||||| || || || ||||| Sbjct 172942 AGCTCTCGACCTCCAGAGTGATGGTCTTGCCGGTCAGTGTTTTCACGAAGATTTGCAT 172999 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | || || ||||| | ||||| |||||||| ||||||||||| Sbjct 173226 ATACCTCCTCTGAGACGGAGCACAAGATGCAGGGTAGACTCTTTCTGTATATTATAGTCT 173285 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||||| || ||||| || || || || || || || | |||||| ||||||||| Sbjct 173286 GCCAGAGTTCGCCCATCTTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGATCAGGA 173345 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| ||||| || || || || || || || | || ||| ||| Sbjct 173346 GGGATTCCTTCTTTGTCCTGGATTTTCGCCTTGACGTTGTCGATCGTGTCGGAGCTTTCC 173405 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||||| ||||| ||||| ||||| | || || ||||| |||||||| Sbjct 173406 ACCTCTAAAGTAATGGTCTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 173455 Score = 134 bits (148), Expect = 3e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | || || ||||| | || || ||||||||||| ||||| || Sbjct 172998 ATACCTCCTCTGAGACGGAGGACAAGATGCAGGGTGGACTCTTTCTGAATGTTATAATCT 173057 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||||| || ||||| || || || || || || || | |||||| || || ||| Sbjct 173058 GCCAGAGTTCGCCCATCTTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGGTCGGGA 173117 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| || ||||||||||| ||||| || || || | ||| || | || | || Sbjct 173118 GGAATACCTTCCTTGTCCTGAATCTTCGCTTTGACGTTGTCGATGGTGTC-CGAGCTCTC 173176 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || || | |||||| || || || ||||| Sbjct 173177 GACCTCCAGAGTGATGGTCTTGCCGGTCAATGTTTTCACGAAGATTTGCAT 173227 Score = 113 bits (124), Expect = 1e-19 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || || | || | ||| | || || || ||||| || || || || Sbjct 173682 ATCCCGCCTCTCAGTCTCAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAATCC 173741 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| | ||| || || || || || || ||||| || | |||||| || |||||| Sbjct 173742 GCCAGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGA 173801 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || || || |||||||| |||| ||||| || | |||||| || | || Sbjct 173802 GGGATCCCCTCCTTGTCTTGAATCTTAACTTTCACATTATCGATCGTATCGG-AGCTCTC 173860 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || || ||||| || || || || || || ||||||||||| Sbjct 173861 CACCTCCAACGTGATGGTCTTCCCCGTCAGCGTCTTCACGAATATCTGCAT 173911 >seq487 Length=466406 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || | || ||| || | ||| | || || || || || || || ||||| Sbjct 176809 ATACCTCCCCTCAACCGAAGCACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCT 176750 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||||| ||||| || || || || || ||||| || |||||||| || || ||| Sbjct 176749 GCAAGAGTTCGGCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCTGGA 176690 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| || || |||||||| || ||||| || || || | ||||||| |||| Sbjct 176689 GGAATTCCCTCCTTGTCCTGAATTTTGGCTTTGACGTTATCAATGGTATCGGAGCTTTCT 176630 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| || ||||||||||| || |||||||| ||||| |||||||| Sbjct 176629 ACTTCTAAAGTGATAGTCTTACCGGTGAGTGTTTTCACAAAAATCTGCAT 176580 Score = 143 bits (158), Expect = 6e-29 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || | || ||| || | || | || || || ||||| || || || || Sbjct 182327 ATCCCTCCCCTCAACCGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCT 182268 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | |||||||| || || ||||||||||| || | |||||| || ||||| Sbjct 182267 GCAAGGGTGCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGG 182208 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| || |||||||||||||| || || ||||| || | ||||||||| || Sbjct 182207 GGGATTCCCTCCTTATCCTGAATCTTGGCCTTCACATTGTCGATGGTATCGCTGCTCTCG 182148 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTAC 104568 ||||| || || || ||||| || || || || || ||||| |||||||| || | ||| Sbjct 182147 ACCTCGAGCGTGATGGTCTTTCCCGTCAGCGTCTTCACAAAGATCTGCATGTTCTCTAC 182089 Score = 134 bits (148), Expect = 3e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | || || | ||| | || || || ||||| || || ||||| Sbjct 177493 ATACCTCCCCTGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCC 177434 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||||| || ||||| || || |||||||| || || |||||||| || || || Sbjct 177433 GCGAGAGTTCGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCTGGG 177374 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAG-GTTC 104508 || || ||||| || ||||||||||| ||||| ||||| || | ||||| | || ||| Sbjct 177373 GGAATCCCTTCCTTGTCCTGAATCTTAGCTTTCACATTATCGATCGTATC-CGAGCTTTC 177315 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||| || || || ||||| ||||| | ||||| || || || ||||| Sbjct 177314 TACCTCAAGAGTGATCGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 177264 Score = 131 bits (144), Expect = 4e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || | ||| | || || || || || || |||||||| Sbjct 177265 ATACCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTATAGTCC 177206 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||||| || ||||| || || || || || || || || ||||| || || || Sbjct 177205 GCGAGAGTTCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGTCTCTGCTGGTCTGGG 177146 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || |||||||| || || ||||| || | ||| ||| ||| Sbjct 177145 GGAATTCCTTCTTTGTCTTGAATCTTAGCCTTGACATTATCGATGGTGTCGGAGCTTTCC 177086 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| |||||||| || || || || || || |||||||| Sbjct 177085 ACCTCCAGAGTAATTGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 177036 Score = 131 bits (144), Expect = 4e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || | ||| | ||||| || |||||||| || ||||| Sbjct 177721 ATGCCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCT 177662 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || ||||| || || || ||||| || || |||||||| || || || Sbjct 177661 GCGAGGGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGG 177602 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAG-GTTC 104508 || |||||||| || ||||||||||| || || ||||| || | ||||| | || ||| Sbjct 177601 GGAATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATCGTATC-CGAGCTTTC 177543 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||| || || || ||||| || || || || || || || || ||||| Sbjct 177542 TACCTCCAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 177492 Score = 131 bits (144), Expect = 4e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || | ||| | || || || || || || || ||||| Sbjct 182555 ATACCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCT 182496 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | |||||||| || || |||||||| || || | |||||| || ||||| Sbjct 182495 GCAAGGGTGCGGCCGTCTTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCAGGG 182436 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| || || ||||||||||| || || ||||| || | ||| ||| ||| Sbjct 182435 GGAATTCCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTGTCGGAGCTTTCC 182376 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| |||||||| || || || || || || |||||||| Sbjct 182375 ACCTCCAGAGTAATTGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 182326 Score = 125 bits (138), Expect = 2e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || | || ||| || | || | || || || || || || || ||||| Sbjct 176353 ATCCCTCCCCTCAACCGAAGCACCAAGTGAAGAGTCGACTCCTTTTGGATGTTGTAGTCC 176294 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||||| |||||||| | ||| || ||||| ||||| |||||||| || || || Sbjct 176293 GCGAGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCTGGG 176234 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || ||||| || || ||||||||||| ||||| || || || | ||| ||| || | || Sbjct 176233 GGAATTCCCTCCTTGTCCTGAATCTTAGCTTTCACGTTGTCGATGGTGTCG-GAGCTCTC 176175 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || || || || || || || |||||||| Sbjct 176174 CACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 176124 Score = 109 bits (120), Expect = 1e-18 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || | ||| | || || || || || || || ||||| Sbjct 183011 ATACCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCT 182952 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | ||| ||||| || || || ||||| || || | || || ||||||||| Sbjct 182951 GCGAGGGTACGACCATCTTCGAGCTGCTTACCAGCGAAGATCAATCTTTGCTGATCAGGA 182892 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || || ||||||||||| ||||| || || || | || ||| || | || Sbjct 182891 GGAATGCCCTCCTTGTCCTGAATCTTAGCTTTAACGTTGTCGATAGTGTCG-GAGCTCTC 182833 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || || || || || |||||||| || ||||||||| Sbjct 182832 CACTTCCAGAGTGATCGTTTTGCCGGTCAGCGTTTTTACGAAGATCTGCATT 182781 Score = 102 bits (112), Expect = 2e-16 Identities = 138/189 (73%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 104374 CTGAATATTAT--AGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 |||||| || | |||| | || || | || ||||| || || || ||||| || || Sbjct 183197 CTGAATCTTNTGTAGTCTGCGAGCGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATC 183138 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 |||||||| || || || || |||||||| || ||||||||||| || || ||||| || Sbjct 183137 AGCCTCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTATCG 183078 Query 104492 ACGGTATCGCTAG-GTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 | || || | || ||| ||||| || || || ||||| || || || ||||| || || Sbjct 183077 ATCGTGTC-CGAGCTTTCCACCTCCAGAGTGATGGTCTTTCCGGTCAGAGTTTTGACGAA 183019 Query 104551 TATCTGCAT 104559 || ||||| Sbjct 183018 GATTTGCAT 183010 Score = 93.3 bits (102), Expect = 1e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | | || || | ||| | ||||| || |||||||| || ||||| Sbjct 183334 ATTCCTCCTCTCAAACGGAGCACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCT 183275 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || ||||| || || || ||||| || || |||||||| || || || Sbjct 183274 GCGAGCGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGT 183215 Query 104450 GGTATTCCTTCTTTATCCTGAATCTT 104475 || |||||||| || ||||||||||| Sbjct 183214 GGAATTCCTTCCTTGTCCTGAATCTT 183189 >seq2625 Length=346021 Score = 140 bits (154), Expect = 7e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || || ||||| | || | ||| | ||||| || || ||||| || ||||| Sbjct 282020 ATTCCTCCCCTCAGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCG 281961 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || | |||||| || ||||| ||||| |||||||| | |||||| ||||| ||| Sbjct 281960 GCCAAGGTACGACCGTCCTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGA 281901 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| || ||||||||||| | ||| || || || | || || || | || Sbjct 281900 GGGATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTGTCAATCGTGTC-AGAGCTCTC 281842 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || |||||||| || | ||| || ||||| |||||||| Sbjct 281841 CACCTCAAGAGTGATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCAT 281791 Score = 127 bits (140), Expect = 5e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404 || || || ||||| | || || ||||||||||| || ||||| | || || | ||| Sbjct 280637 CTCAGAACAAGATGAAGCGTGGACTCTTTCTGAATGTTGTAGTCGGCCAGCGTCCGGCCG 280578 Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464 || ||||||||||| || || || || | |||||| ||||| || || ||||| || ||| Sbjct 280577 TCCTCTAGTTGTTTGCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATTCCCTCCTTA 280518 Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524 ||||| ||||| | || ||||| || | ||| || | || ||||| || ||||| Sbjct 280517 TCCTGGATCTTAGTCTTGACATTGTCGATGGTGTCAGAACTCTCGACCTCGAGGGTAATG 280458 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || ||||| || || || ||||| Sbjct 280457 GTTTTCCCCGTCAGAGTTTTAACGAAAATTTGCAT 280423 Score = 125 bits (138), Expect = 2e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| ||||| | || | ||| | |||||||| || || || || ||||| Sbjct 281792 ATACCACCTCTCAGCCTCAAAACCAAATGGAGGGTAGATTCCTTTTGGATGTTGTAGTCG 281733 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || || || || || ||||| ||||| |||||||| | |||||| ||||| ||| Sbjct 281732 GCCAACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGA 281673 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| || ||||||||||| | ||| || || || | || || || | || Sbjct 281672 GGGATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTATCAATCGTGTC-AGAGCTCTC 281614 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || || || ||||| || || || ||||| Sbjct 281613 CACCTCAAGAGTTATGGTCTTGCCGGTGAGGGTTTTAACGAAGATTTGCAT 281563 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | ||||| || ||||| |||||||| || | || |||| ||||| || Sbjct 281087 ACGAGATGGAGAGTAGACTCCTTCTGTATATTATAATCGGCCAGCGTTCGGCCGTCCTCC 281028 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | || || || ||||| || | |||||||| || ||||| || || || ||||| || Sbjct 281027 AACTGCTTACCTGCAAAGATCAATCTCTGTTGGTCTGGAGGAATACCCTCCTTATCTTGG 280968 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| | ||| || || || | ||| ||| ||| ||||| | || || ||||| Sbjct 280967 ATCTTGGTTTTGACGTTGTCGATGGTGTCGGAGCTTTCGACCTCCAAGGTGATGGTCTTT 280908 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || |||||||||||||| Sbjct 280907 CCTGTAAGCGTCTTCACAAATATCTGCAT 280879 >seq3072 Length=975934 Score = 129 bits (142), Expect = 1e-24 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| || || |||||||| || | |||| |||| || || || ||||| Sbjct 272013 TGCAAAGTGGATTCCTTTTGGATATTATAATCCGCTAGAATTCTTCCATCCTCGAGTTGC 271954 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 ||||| |||||||| | |||||| || || || || ||||| || || || |||||||| Sbjct 271953 TTTCCTGCAAAAATCAACCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCTTGAATCTTC 271894 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGT 104535 | || || || || | ||||| || | || ||||| || ||||| ||||||||||| Sbjct 271893 GTCTTCACGTTGTCGATAGTATCTG-AGCTCTCAACCTCAAGAGTAATGGTCTTACCAGT 271835 Query 104536 AAGTGTTTTTACAAATATCTGCATT 104560 | || || || || ||||||||| Sbjct 271834 CAAGGTCTTCACGAAAATCTGCATT 271810 Score = 120 bits (132), Expect = 7e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| ||||| | || | ||| | |||||||| || || || || ||||| | Sbjct 271581 CCACCTCTCAGCCTCAACACCAAATGGAGGGTAGATTCGTTTTGGATGTTGTAGTCGGCC 271522 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | || || || || || ||||| ||||| |||||||| | |||||| ||||| ||||| Sbjct 271521 AACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGGG 271462 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTAC 104511 || ||||| || ||||||||||| | ||| || || || | || || || | || || Sbjct 271461 ATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTGTCAATCGTGTC-AGAGCTCTCCAC 271403 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || ||||| || || || | ||| || || || ||||| Sbjct 271402 CTCAAGAGTTATGGTCTTGCCCGTGAGGGCTTTAACGAAGATTTGCAT 271355 Score = 98.7 bits (108), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| ||||| || || | ||| || |||||||| || || || | || || Sbjct 271356 ATGCCTCCTCTCAGCCTCAGGACCAAATGCAAGGTAGATTCCTT-TGGATGTAGTAATCG 271298 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | ||| ||||| || ||||| || |||||||| | |||| || || || Sbjct 271297 GCGAGTGTCCGACCATCTTCAAGCTGTTTCCCGGCAAAAATCAATTTCTGCTGGTCTAGA 271238 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 | ||||| || || || ||||| || | ||| ||||| || | | ||| | || Sbjct 271237 AGAATTCCCTCCTTGTCTTGAATTTTGGTTTTCACATTGTCGATG---TCGGAACTCTCA 271181 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || ||||||||||| | ||||| || || |||||||| Sbjct 271180 ACCTCCGAAGTGATCGTCTTACCAGTCAAGGTTTTGACGAAGATCTGCAT 271131 >seq4017 Length=874442 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || |||||||| || || || || ||||| |||| | || || || || || ||||| Sbjct 472177 TGCAATGTAGACTCCTTTTGGATGTTATAATCAGCCAATGTCCTCCCATCCTCGAGTTGC 472118 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || || || ||||| |||||||| || || ||||| || || || || ||||||||||| Sbjct 472117 TTGCCGGCGAAAATCAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTG 472058 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || ||||| || | |||||| ||| ||||| || || || ||||| || || Sbjct 472057 GTCTTAACATTGTCGATCGTATCGGAGCTTTCGACCTCAAGAGTGATGGTCTTCCCCGTC 471998 Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563 | ||| || ||||| |||||||| ||| Sbjct 471997 AATGTCTTCACAAAGATCTGCATCTTG 471971 Score = 118 bits (130), Expect = 2e-21 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| || |||||||| || |||||||||||||| | | || | ||| || Sbjct 473554 AGCACAAGATGCAAGGTAGATTCCTTTTGAATATTATAGTCTGCCAAGGTACGACCATCC 473495 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || ||||| || | | ||| || || ||||| || || || |||||| Sbjct 473494 TCGAGCTGCTTACCGGCAAAGATCAATCGCTGCTGGTCGGGAGGAATACCCTCCTTATCC 473435 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAATA 104524 || ||||||| || || || || | |||||| ||| ||| ||||| | || || Sbjct 473434 TGGATCTTTGTCTTCACGTTGTCGATGGTATCTGAGCT---TTCAACCTCCAAAGTGATG 473378 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| | ||| || ||||| |||||||| Sbjct 473377 GTTTTTCCAGTCAATGTCTTGACAAAGATCTGCAT 473343 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | ||| | || || || | ||||| || || ||||| || ||||| Sbjct 472660 ATACCACCTCTCAACCTCAACACGAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCG 472601 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | |||||||||||||| || || ||||| || || || || | | ||| || || || Sbjct 472600 GCCAGAGTTCTACCGTCCTCAAGCTGTTTACCTGCGAAGATCAAACGCTGCTGGTCTGGG 472541 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || ||||| || ||||| | || ||||| || | ||| ||| | || Sbjct 472540 GGAATACCCTCCTTATCTTGGATCTTAGTCTTCACATTATCGATGGTGTCGGAACTCTCA 472481 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || ||||| ||||| || || | || || || || || ||||| Sbjct 472480 ACCTCGAGAGTAATGGTCTTTCCTGTCAACGTCTTGACGAAGATTTGCAT 472431 >seq1237 Length=483227 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 269185 CGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATT 269244 ||| ||||||||| |||||||| | ||| | ||||| || | |||||||| ||||| | Sbjct 205298 CGCAATCTTTTGGCTGAAGAAACGGGGCTTGATGCCTGGTCTTACTTTCTCGAACGAGCT 205357 Query 269245 GATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTG 269283 |||| ||| || ||||| | ||||||||||||||||| Sbjct 205358 GATATCCAGAGATGAAGGACTTCACTGCGACTTCGCTTG 205396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151337369767996