Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq3661 82.4 9e-11 >seq3661 Length=215601 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 19355 ATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATG 19414 || ||| || | |||||||||||| || | || ||| ||||| ||| ||| Sbjct 97239 ATTCCTCAAGTTGGTGATAAGTTTTCTAGCATGCATGGTCAGAAAGGTGTTGTTGGGATG 97180 Query 19415 ATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATT 19474 ||| | ||| |||||| |||||||||| |||| || || || || ||| |||| || Sbjct 97179 GTTTTTACTCAGGAAGATCTGCCTTTTACCCAAGAAGGAATTGTACCTGATATTATCATC 97120 Query 19475 AACCCACATGCTTTTCCAAGTCG 19497 ||||| ||||| ||||||||||| Sbjct 97119 AACCCTCATGCCTTTCCAAGTCG 97097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595841185969200