Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq487 122 8e-23 seq4017 118 1e-21 seq2625 118 1e-21 seq4073 102 8e-17 seq3627 93.3 4e-14 seq3072 91.5 1e-13 seq824 84.2 2e-11 >seq487 Length=466406 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || ||| ||||| ||||| | || ||||||||||| |||||||| || Sbjct 177034 CCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCTGCG 176975 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | |||||| || ||| |||| || | ||||||||| || ||| Sbjct 176974 AGGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCAGGGGGG 176915 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || |||| | || | ||| |||| | ||| | Sbjct 176914 ATTCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATAGTGTCGGAGCTCTCCACC 176855 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | |||||| || || ||||| || ||||| |||||||| Sbjct 176854 TCGAGGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 176808 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||||| ||| | ||| | |||||||| |||||||||||||||||| | Sbjct 183559 CCTCCTCGCAGACGCAACACCAGATGCAACGTCGACTCTTTTTGAATGTTGTAATCGGCC 183500 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || ||||||||||| ||| |||| || ||||||||||| ||||| Sbjct 183499 AGTGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCGGGAGGA 183440 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| |||||| || | | || | || || | | ||| | Sbjct 183439 ATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTGTCGATGGTGTCAGAGCTCTCCACT 183380 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | |||||| || || ||||| || ||||| || ||||| Sbjct 183379 TCCAGAGTGATGGTTTTCCCCGTCAGAGTCTTGACGAAGATTTGCAT 183333 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | ||| || ||||| ||||| | || ||||||||||| |||||||| || Sbjct 176806 CCTCCCCTCAACCGAAGCACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCA 176747 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || || |||| | | ||||||||| ||||| Sbjct 176746 AGAGTTCGGCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGA 176687 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| || ||||| ||| ||| || |||| | || | ||||||| | || | Sbjct 176686 ATTCCCTCCTTGTC-CTGAATTTTGGCTTTGACGTTATCAATGGTATCGGAGCTTTCTAC 176628 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || |||||||| || ||||| || ||||||||||| Sbjct 176627 TTCTAAAGTGATAGTCTTACCGGTGAGTGTTTTCACAAAAATCTGCAT 176580 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | ||| || ||||| || || | ||| |||||||| || ||||||||||| Sbjct 182324 CCTCCCCTCAACCGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCA 182265 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || |||||||| || || |||| || | ||||||||| || ||| Sbjct 182264 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 182205 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || || || || || ||| | | || | |||||| || ||||| Sbjct 182204 ATTCCCTCCTTATCCTGAATCTTGGCCTTCACATTGTCGATGGTATCGCTGCTCTCGACC 182145 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | ||| || || || || || || || || ||||||||| Sbjct 182144 TCGAGCGTGATGGTCTTTCCCGTCAGCGTCTTCACAAAGATCTGCATG 182097 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || ||| ||||| ||||| | || |||||||| ||||||||||| || Sbjct 177719 GCCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGC 177660 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || ||||||||||| ||| |||| | | ||||||||| || || Sbjct 177659 GAGGGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGG 177600 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| || || ||| | | || | ||||| | | || | Sbjct 177599 AATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATCGTATCCGAGCTTTCTAC 177540 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| ||||| || ||||| || ||||| Sbjct 177539 CTCCAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 177492 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||| ||||| ||||| | || ||||||||||| |||||||| || | ||| || Sbjct 182997 ACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCGAGGGTACGACC 182938 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 || || |||||||| || ||| |||| || | ||||| || ||||| || || || || Sbjct 182937 ATCTTCGAGCTGCTTACCAGCGAAGATCAATCTTTGCTGATCAGGAGGAATGCCCTCCTT 182878 Query 131139 GTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAA 131197 ||| ||| | | |||| | | | || | ||| |||| | ||| | || | || | Sbjct 182877 GTC-CTGAATCTTAGCTTTAACGTTGTCGATAGTGTCGGAGCTCTCCACTTCCAGAGTGA 182819 Query 131198 CGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| ||||| || ||||||||||| |||||||| Sbjct 182818 TCGTTTTGCCGGTCAGCGTTTTTACGAAGATCTGCAT 182782 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | |||||| ||||| ||||| | || ||||||||||| |||||||| || Sbjct 182780 CCTCCTCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCG 182721 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || |||||||| || ||| |||| | | ||||||||| || || Sbjct 182720 AGAGTGCGGCCATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 182661 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| ||| | | ||||| || |||| | || | Sbjct 182660 ATCCCTTCCTTGTCCTGGATTTTTGCCTTCACGTTGTCCACGGTGTCGGAGCTTTCCACC 182601 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || || || || ||||| || ||||| Sbjct 182600 TCGAGAGTGATCGTCTTTCCTGTGAGGGTCTTCACGAAGATTTGCAT 182554 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||| ||||| ||||| | || ||||||||||| |||||||| || | |||||| Sbjct 182541 ACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCC 182482 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 ||| || |||||||| || ||| |||| || | ||||||||| || || ||||| || || Sbjct 182481 GTCTTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGAATTCCCTCCTT 182422 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| || || ||| | | || | || |||| | || | || | |||| Sbjct 182421 GTCCTGAATCTTGGCCTTCACATTATCGATGGTGTCGGAGCTTTCCACCTCCAGAGTAAT 182362 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || ||||| || || || || ||||| |||||||| Sbjct 182361 TGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 182326 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | ||| || ||||| || || | |||||||||||||| |||||||| || Sbjct 176350 CCTCCCCTCAACCGAAGCACCAAGTGAAGAGTCGACTCCTTTTGGATGTTGTAGTCCGCG 176291 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || | |||||||| ||| | || | | ||||||||| || || Sbjct 176290 AGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGA 176231 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| || ||||| ||| | | || || | | || | || |||| | ||| | Sbjct 176230 ATTCCCTCCTTGTC-CTGAATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCAC 176172 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| ||||| || ||||| |||||||| Sbjct 176171 CTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 176124 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||| ||||| ||||| | || ||||||||||| ||||| || || | || || Sbjct 177251 ACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTATAGTCCGCGAGAGTTCGGCC 177192 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 || || ||||||||||| ||| |||| | | ||||||||| || || ||||||||||| Sbjct 177191 ATCTTCGAGCTGCTTGCCGGCGAAGATCAGTCTCTGCTGGTCTGGGGGAATTCCTTCTTT 177132 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| || || ||||| | || | || |||| | || | || | |||| Sbjct 177131 GTCTTGAATCTTAGCCTTGACATTATCGATGGTGTCGGAGCTTTCCACCTCCAGAGTAAT 177072 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || ||||| || || || || ||||| |||||||| Sbjct 177071 TGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 177036 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | |||||| ||||| ||||| | || |||||||| ||||||||||| || Sbjct 183331 CCTCCTCTCAAACGGAGCACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCG 183272 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| ||| |||| | | ||||||||| || || Sbjct 183271 AGCGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 183212 Query 131128 ATTCCTTCTTTGTC 131141 |||||||| ||||| Sbjct 183211 ATTCCTTCCTTGTC 183198 >seq4017 Length=874442 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081 ||| || | ||| | ||| ||||||||||| |||||||| ||| | ||| | | ||| Sbjct 472871 CAGTACGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCAAGGGTCCTCCCGTC 472812 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| ||||||||||||||| |||||| ||||||||||| |||||||| || || ||||| Sbjct 472811 CTCAAGCTGCTTGCCTGCGAAGATTAGTCGCTGCTGGTCTGGAGGGATACCCTCCTTGTC 472752 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 |||||| ||| | | || | || |||| ||| | || | ||| | ||| Sbjct 472751 TTGGATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTCTCCACCTCCAAGGTGATGGT 472692 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || | || || ||||| |||||||| Sbjct 472691 CTTGCCAGTCAATGTCTTCACGAAGATCTGCAT 472659 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | ||| || | || | ||| ||||||||||| |||||||| ||| | Sbjct 473113 CCACCTCTCAACCTCAGGACGAGGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGCC 473054 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | || || ||||||||||| ||| |||| || |||||||| || ||||| Sbjct 473053 AGGGTCCTTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCTGGAGGA 472994 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || |||||| ||| | | || | ||| || | ||| | Sbjct 472993 ATACCCTCCTTATCTTGGATTTTAGTCTTCACATTGTCGATAGTGTCAGAACTCTCCACC 472934 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || ||||| || |||||||||||||| Sbjct 472933 TCCAAGGTTATAGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 472887 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| |||| ||| | ||| | || ||||||||||| ||||| || ||| | Sbjct 473341 CCACCTCTCAACCGCAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTATAGTCGGCC 473282 Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || | || | || || ||||| || || ||| |||| || ||||||||||| || || Sbjct 473281 AAAGTCCTGCCA-TCTTCGAGCTGTTTCCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 473223 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||||| ||| | | || | || |||| ||| | Sbjct 473222 AATGCCTTCCTTGTCTTGAATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTCTCCAC 473163 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || ||||| || |||||||||||||| Sbjct 473162 CTCCAAGGTGATGGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 473115 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || ||| | || | ||| |||||||||||||||||||| ||| | Sbjct 472657 CCACCTCTCAACCTCAACACGAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCC 472598 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | |||||| ||||| || |||||| |||| |||||||||||||| || || Sbjct 472597 AGAGTTCTACCGTCCTCAAGCTGTTTACCTGCGAAGATCAAACGCTGCTGGTCTGGGGGA 472538 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||| | | || | || |||| ||| | Sbjct 472537 ATACCCTCCTTATCTTGGATCTTAGTCTTCACATTATCGATGGTGTCGGAACTCTCAACC 472478 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || || || | || || ||||| || ||||| Sbjct 472477 TCGAGAGTAATGGTCTTTCCTGTCAACGTCTTGACGAAGATTTGCAT 472431 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| ||||||||||| ||||||||||| || || | ||||| ||||||||||| Sbjct 472400 GGTGGACTCCTTTTGGATGTTGTAATCAGCCAGCGTCCTTCCATCCTCAAGCTGCTTGCC 472341 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 || |||| | |||||||||||| || || || || || || || ||||| ||| Sbjct 472340 GGCAAAGATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCTTGAATTTTAGTCTT 472281 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | || | || || | | ||| | |||| ||||| || ||||| || | ||| Sbjct 472280 TACATTGTCGATGGTGTCAGAGCTCTCCACCTCGAGGGTAATTGTCTTACCCGTCAAAGT 472221 Query 131217 TTTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 472220 CTTGACGAAGATCTGCAT 472203 >seq2625 Length=346021 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | ||| | ||| || | ||| | || ||||| || ||||||||||| ||| Sbjct 280650 GCCTCCCCTCAATCTCAGAACAAGATGAAGCGTGGACTCTTTCTGAATGTTGTAGTCGGC 280591 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||||||||| || ||||| ||| |||| || | |||||| || || || Sbjct 280590 CAGCGTCCGGCCGTCCTCTAGTTGTTTGCCGGCGAAGATCAACCTCTGCTGATCTGGGGG 280531 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||| || || || ||| || ||||| | || | || || | ||||| Sbjct 280530 GATTCCCTCCTTATCCTGGATCTTAGTCTTGACATTGTCGATGGTGTCAGAACTCTCGAC 280471 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| |||||| || || |||||||| |||||||| ||||| Sbjct 280470 CTCGAGGGTAATGGTTTTCCCCGTCAGAGTTTTAACGAAAATTTGCAT 280423 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 || ||||| | ||| |||||||||||||||||||| ||| || ||| || |||||| Sbjct 281999 ACCAAATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCCAAGGTACGACCGTCCTCA 281940 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 || ||||| ||||| | || || | |||||| || |||||||| ||||| ||||| Sbjct 281939 AGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGGATGCCTTCCTTGTCCTGA 281880 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205 || ||| || | | || | || || | | ||| | || | || | ||| ||| Sbjct 281879 ATCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTCTCCACCTCAAGAGTGATGGTCTTA 281820 Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| | || || || ||||||||||| Sbjct 281819 CCGGTCAATGTCTTCACAAAAATCTGCAT 281791 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| | ||| || ||||| | || |||||| || || ||||| ||| | Sbjct 280193 CCTCCACGCAGTCTCAGAACCAAATGCAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCC 280134 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||| ||||| || |||||||| ||| | || || ||||||||||| || ||| Sbjct 280133 AAACTGCGACCATCCTCGAGTTGCTTGCCGGCGAAAATCAACCGCTGCTGGTCAGGGGGG 280074 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| |||||| ||||| | || | ||||||| ||||| Sbjct 280073 ATGCCCTCCTTGTCCTGGATTTTGCTCTTGACGTTGTCGATGGTATCGGAACTCTCGACC 280014 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || ||||| || ||||| |||||||| Sbjct 280013 TCCAAAGTGATCGTCTTCCCTGTCAGAGTCTTCACGAAGATCTGCAT 279967 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | ||| | || ||| | ||| | || ||||||||||| |||||||| || | Sbjct 281333 CCTCCCCTCAATCTCAACACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCC 281274 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| | |||||| || || | || || |||||||| || || || Sbjct 281273 AGCGTTCGGCCGTCCTCCAACTGCTTACCGGCAAAAATCAACCGCTGCTGATCTGGTGGA 281214 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || ||| || ||| | | || | |||||||| | || | Sbjct 281213 ATTCCTTCCTTATCTTGGATCTTAGTCTTCACGTTGTCGATAGTATCGGAGCTTTCAACC 281154 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || ||||| || |||||||||||||| Sbjct 281153 TCCAGGGTGATAGTCTTCCCTGTAAGAGTCTTGACGAAAATCTGCAT 281107 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GC 131065 |||||| || | ||| ||||| || || | || || |||||||| || || ||||| || Sbjct 282246 GCCACCACGAAGACGGAGCACCAAGTGCAAAGTAGATTCCTTTTGGATATTATAATCCGC 282187 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | | | | ||||| || ||||| |||||| | || || | ||||||||| || | Sbjct 282186 TAGAATTCTTCCA-TCCTCGAGTTGCTTTCCTGCGAAAATCAACCTCTGCTGGTCTGGGG 282128 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 ||||||| || ||||| || ||| ||| | | || | |||||| | | ||| | Sbjct 282127 GGATTCCCTCCTTGTCTTGAATCTTCGTCTTCACGTTGTCGATAGTATCTGAGCTCTCAA 282068 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| ||||| || | || || |||||||||||||| Sbjct 282067 CCTCAAGAGTAATGGTCTTACCTGTCAAGGTCTTCACGAAAATCTGCAT 282019 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | ||| | |||||| | ||| | |||||||| ||||| |||||||| || Sbjct 280878 GCCTCCCCTCAACCTCAGCACAAGATGCAGAGTCGACTCTTTTTGGATGTTGTAGTCCGC 280819 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || || || | |||||||||||| |||| || | |||||| || ||||| Sbjct 280818 GAGGGTACGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGCTGATCTGGAGG 280759 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGA-GCTGCTCCACAGTATCGGTGGACTCGA 131185 |||||| || ||||| ||||| || | | || || | || || | | |||| Sbjct 280758 GATTCCCTCCTTGTCCTGAATTTTGGTTTTCACGATG-TCAATTGTGTCAGAGCTTTCGA 280700 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || | |||||| || || || || || ||||| ||||||||| || Sbjct 280699 CCTCCAACGTGATGGTTTTCCCCGTGAGCGTCTTCACGAAGATCTGCATGCCT 280647 >seq4073 Length=488838 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||| ||||| | ||| | ||| ||||| || || || || || || || || ||| Sbjct 173240 ACGGAGCACAAGATGCAGGGTAGACTCTTTCTGTATATTATAGTCTGCCAGAGTTCGCCC 173299 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 || || |||||||| || ||| |||| || | |||||| || ||||||||||||||||| Sbjct 173300 ATCTTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGATCAGGAGGGATTCCTTCTTT 173359 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| ||||||| ||||| | || | || |||| | || | || | |||| Sbjct 173360 GTCCTGGATTTTCGCCTTGACGTTGTCGATCGTGTCGGAGCTTTCCACCTCTAAAGTAAT 173419 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || || || | || || || ||||||||||| Sbjct 173420 GGTCTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 173455 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081 || ||| ||||| | ||||||||||| || ||||||||||| || ||||| || Sbjct 173699 CAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAGAGTGCGACCATC 173758 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| ||||||||||| || |||| || | ||||||||| |||||||| || || ||||| Sbjct 173759 CTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGGATCCCCTCCTTGTC 173818 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 || || || | | || | ||||||| | ||| | || | || | ||| Sbjct 173819 TTGAATCTTAACTTTCACATTATCGATCGTATCGGAGCTCTCCACCTCCAACGTGATGGT 173878 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || || || ||||| |||||||| Sbjct 173879 CTTCCCCGTCAGCGTCTTCACGAATATCTGCAT 173911 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 || ||||| | ||||| |||||||| ||||||||||| || ||||| ||||| Sbjct 173475 ACCAAATGAAGCGTCGATTCCTTTTGGATGTTGTAATCCGCCAGAGTGCGACCATCCTCG 173534 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 ||||||||||| || |||| | | ||||||||| ||||| || || || ||||| Sbjct 173535 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATCCCCTCCTTGTCCTGA 173594 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205 ||||| ||| | | || | || || | | ||||| || | || | ||| || Sbjct 173595 ATTTTGACCTTCACATTGTCGATCGTGTCAGAGCTCTCGACCTCCAACGTGATGGTCTTT 173654 Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || | || || |||||||||||||| Sbjct 173655 CCAGTCAAGGTCTTGACGAAAATCTGCAT 173683 >seq3627 Length=715207 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| | || | ||| |||||||||||||||||||| ||| | ||||| || Sbjct 381944 AGCACAAGGTGCAAGGTAGACTCCTTTTGAATGTTGTAGTCGGCAAGAGTGCGACCATCT 381885 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 || ||||||||||| ||| |||| || |||||||| |||||||| || || || ||||| Sbjct 381884 TCCAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGATCCGGAGGAATCCCCTCCTTGTC 381826 >seq3072 Length=975934 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 || ||||| | ||| ||||||||||| ||||| || || || ||| || |||||| Sbjct 271791 ACCAAATGGAGGGTAGACTCCTTTTGGATGTTTTAGCCGGCCAAGGTACGACCGTCCTCA 271732 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 || ||||| || ||| | |||||| |||||||||| || || || || ||||| || Sbjct 271731 AGTTGCTTCCCAGCGAAAATTAAAAGCTGCTGGTCTGGTGGAATGCCCTCTTTATCTTGA 271672 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205 || || ||| | | || | || |||| | ||| | || | || | ||| ||| Sbjct 271671 ATCTTGGTCTTCACGTTGTCAATCGTGTCGGAGCTCTCAACCTCAAGAGTGATGGTCTTA 271612 Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCA 131233 ||||| | || || || |||||||||| Sbjct 271611 CCGGTCAATGTCTTCACAAAAATCTGCA 271584 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GC 131065 |||||| || | ||| ||||| || || | || || |||||||| || || ||||| || Sbjct 272038 GCCACCACGAAGACGGAGCACCAAGTGCAAAGTGGATTCCTTTTGGATATTATAATCCGC 271979 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | | | | ||||| || ||||| ||||| | || || | ||||||||| || | Sbjct 271978 TAGAATTCTTCCA-TCCTCGAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGGTCTGGGG 271920 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 ||||||| || ||||| || ||| ||| | | || | |||||| | | ||| | Sbjct 271919 GGATTCCCTCCTTGTCTTGAATCTTCGTCTTCACGTTGTCGATAGTATCTGAGCTCTCAA 271860 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| ||||| || | || || |||||||||||||| Sbjct 271859 CCTCAAGAGTAATGGTCTTACCAGTCAAGGTCTTCACGAAAATCTGCAT 271811 >seq824 Length=416372 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| | || | ||| |||||||| || |||||||| ||| | |||||| || Sbjct 212155 AGCACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCT 212096 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 || ||||||||||| ||| |||| || ||||||||||| || || || || || ||||| Sbjct 212095 TCAAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATCCCCTCCTTGTC 212037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471988391038080