Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq4020 140 2e-28 seq3041 140 2e-28 seq2802 118 7e-22 seq4017 116 2e-21 seq2625 113 3e-20 seq487 111 1e-19 seq4073 98.7 7e-16 seq3764 89.7 3e-13 seq3072 84.2 1e-11 >seq4020 Length=382506 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 334344 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 334403 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 334404 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 334438 Score = 96.9 bits (106), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 336790 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 336849 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 336850 GCCCGTATTTAGCCTT 336865 >seq3041 Length=33331 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 14431 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 14372 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 14371 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 14337 >seq2802 Length=162306 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||| ||||||||||||||||||| ||||||| || |||||||| Sbjct 86246 AAGCCCGTTCCCTTGGGTGTGGTTTCGCTAGATAGTGGATAGGGACAGTGGGAATCTCGT 86305 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||| | |||||| |||| Sbjct 86306 TAATCCATTCATGCGCGTCACGAGTTAGATAACGA 86340 >seq4017 Length=874442 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| |||||||| | ||||||||| ||||||||| || || || || | Sbjct 473343 TACCACCTCTCAACCGCAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTATAGTCGG 473284 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | | || || | ||||| || || || || | || || || || | || Sbjct 473283 CCAAAGTCCTGCCATCTTCGAGCTGTTTCCCAGCGAAGATCAATCGCTGCTGGTCTGGGG 473224 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| ||||| |||||| ||||||||| | || || || ||| || | Sbjct 473223 GAATGCCTTCCTTGTCTTGAATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTCTCCA 473164 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || || || |||| || |||||||| |||||||| Sbjct 473163 CCTCCAAGGTGATGGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 473115 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||||| | || |||| ||||| ||| ||||||||| || |||||||||| Sbjct 472431 TACCTCCTCTCAGTCTCAGAACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAG 472372 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 || | | | || || | || || |||||||| || || || || || || | || Sbjct 472371 CCAGCGTCCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGG 472312 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || || || |||||| ||| ||||| | || || || || || | Sbjct 472311 GAATACCCTCCTTATCTTGAATTTTAGTCTTTACATTGTCGATGGTGTCAGAGCTCTCCA 472252 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | ||||| || ||||||||||| || || ||||| |||||||| Sbjct 472251 CCTCGAGGGTAATTGTCTTACCCGTCAAAGTCTTGACGAAGATCTGCAT 472203 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || ||||| || | ||| | ||| | || |||||||||||||| || || | Sbjct 473571 TACCTCCCCTCAATCGTAGCACAAGATGCAAGGTAGATTCCTTTTGAATATTATAGTCTG 473512 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| | || || | || || |||||||| || | || || || |||| | Sbjct 473511 CCAAGGTACGACCATCCTCGAGCTGCTTACCGGCAAAGATCAATCGCTGCTGGTCGGGAG 473452 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || || ||| || ||| |||||| || | || |||||| ||||||| Sbjct 473451 GAATACCCTCCTTATCCTGGATCTTTGTCTTCACGTTGTCGATGGTATCTGAGCTTTCAA 473392 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || ||||| || ||||| || || || || |||||||| Sbjct 473391 CCTCCAAAGTGATGGTTTTTCCAGTCAATGTCTTGACAAAGATCTGCAT 473343 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||||| || | || || | ||| ||||| || ||||| ||||||||||| | Sbjct 473798 ACCACCTCGCAGCCTCAGAACAAGATGCAGAGTTGATTCTTTTTGGATATTGTAATCCGC 473739 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || ||| | || || | || ||||| ||||| || | | || ||||||| || Sbjct 473738 CAGGGTTCGTCCATCTTCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGATCGGGAGG 473679 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||||| |||||| || || || ||||| | || || || ||||| || Sbjct 473678 AATTCCTTCCTTGTCCTGGATCTTGGTTTTGACATTGTCGATGGTGTCAGAGCTTTCGAC 473619 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || ||||| || || |||||||| |||||||| |||||||| Sbjct 473618 CTCGAGAGTGATAGTCTTCCCGGTCAAGGTCTTCACGAAGATCTGCAT 473571 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | |||||| | || || || |||||||||||| ||||| || | Sbjct 472659 TACCACCTCTCAACCTCAACACGAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGG 472600 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 || | | |||| || | ||||| || || || || | || || || || | || Sbjct 472599 CCAGAGTTCTACCGTCCTCAAGCTGTTTACCTGCGAAGATCAAACGCTGCTGGTCTGGGG 472540 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || || || || || ||||||||| | || || || ||| |||| Sbjct 472539 GAATACCCTCCTTATCTTGGATCTTAGTCTTCACATTATCGATGGTGTCGGAACTCTCAA 472480 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | ||||| || || || ||||| || || ||||| || ||||| Sbjct 472479 CCTCGAGAGTAATGGTCTTTCCTGTCAACGTCTTGACGAAGATTTGCAT 472431 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | || || | ||||| || ||||||||| || ||||| || | Sbjct 473115 TACCACCTCTCAACCTCAGGACGAGGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGG 473056 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 || | | | || || | || || ||||| || || | || || ||||| | | Sbjct 473055 CCAGGGTCCTTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCTGGAG 472996 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || || || ||||| ||||||||| | || ||| || ||| || | Sbjct 472995 GAATACCCTCCTTATCTTGGATTTTAGTCTTCACATTGTCGATAGTGTCAGAACTCTCCA 472936 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || ||||| || || |||| || |||||||| |||||||| Sbjct 472935 CCTCCAAGGTTATAGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 472887 >seq2625 Length=346021 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 |||||||| |||||||||||||| || |||||||| || | |||| || | || || Sbjct 280175 ACCAAATGCAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCCAAACTGCGACCATCCTCG 280116 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||| || ||||| || || | || || || || | ||||| ||| || |||||| Sbjct 280115 AGTTGCTTGCCGGCGAAAATCAACCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 280056 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 ||||| ||| || || | || ||||| ||| || || || || || || || || Sbjct 280055 ATTTTGCTCTTGACGTTGTCGATGGTATCGGAACTCTCGACCTCCAAAGTGATCGTCTTC 279996 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || |||| || |||||||| |||||||| || Sbjct 279995 CCTGTCAGAGTCTTCACGAAGATCTGCATCTT 279964 Score = 100 bits (110), Expect = 2e-16 Identities = 162/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || || |||| | ||| |||||||| || || |||||||||||| ||||| | Sbjct 282021 CATT-CCTCCCCTCAGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGAATGTTGTAGT 281963 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | ||| ||| |||| || | ||| ||||| ||||| || | | || ||||| | Sbjct 281962 CGGCCAAGGTACGACCGTCCTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTG 281903 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 |||| |||||| |||||| ||| || ||||| || | | || || || | Sbjct 281902 GAGGGATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTCT 281843 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || | || || || ||||| ||||| || ||||| || |||||||| Sbjct 281842 CCACCTCAAGAGTGATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCAT 281791 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||||| | || |||||||| | || |||||||| || |||||||| | Sbjct 281563 TACCTCCTCTCAGCCTCAGGACCAAATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGG 281504 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || | || || | ||||| |||||||| || | | || || || | | Sbjct 281503 CGAGTGTCCGACCATCTTCAAGCTGTTTCCCGGCAAAAATCAATCTCTGCTGGTCTGGAG 281444 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || ||||| |||||| |||||||| | | || || ||| |||| Sbjct 281443 GAATTCCCTCCTTGTCTTGAATTTTGGTTTTCACATTGTCAATGGTGTCGGAACTCTCAA 281384 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || ||||| || || || ||||||||||| ||||| |||||||| Sbjct 281383 CCTCCAAAGTAATCGTCTTGCCAGTCAAGGTTTTGACGAAAATCTGCAT 281335 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||| | ||| |||||||| || || |||||||| || ||||| || | Sbjct 281791 TACCACCTCTCAGCCTCAAAACCAAATGGAGGGTAGATTCCTTTTGGATGTTGTAGTCGG 281732 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | | || || | ||| ||||||||||| || | | || ||||| | | Sbjct 281731 CCAACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAG 281672 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||| |||||| ||| || ||||| || | | || || || || | Sbjct 281671 GGATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTATCAATCGTGTCAGAGCTCTCCA 281612 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || || || || | |||||| ||||| || ||||| Sbjct 281611 CCTCAAGAGTTATGGTCTTGCCGGTGAGGGTTTTAACGAAGATTTGCAT 281563 >seq487 Length=466406 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || ||||| || | |||||||||||||||| ||||||||| || ||||| || | Sbjct 176808 TACCTCCCCTCAACCGAAGCACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCTG 176749 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || |||| || | || || |||||||| || || | || || || | | Sbjct 176748 CAAGAGTTCGGCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCTGGAG 176689 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || |||||| |||||| || || || | | ||||| ||||| | Sbjct 176688 GAATTCCCTCCTTGTCCTGAATTTTGGCTTTGACGTTATCAATGGTATCGGAGCTTTCTA 176629 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| || ||||| ||||| || | |||||||| || |||||||| Sbjct 176628 CTTCTAAAGTGATAGTCTTACCGGTGAGTGTTTTCACAAAAATCTGCAT 176580 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||||||||| | |||||||| ||||| |||||||| || ||||| || | Sbjct 176580 TACCTCCTCTCAAACGAAGAACCAAATGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCG 176521 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || |||| || ||||| || || || || || || | || || || | || Sbjct 176520 CAAGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGG 176461 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || |||||| || || |||||| || | || || || ||||||| Sbjct 176460 GAATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCAA 176401 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || || ||||| | ||| |||||||| || ||||| Sbjct 176400 CCTCCAAAGTGATCGTCTTGCCCGTGAGGGTCTTCACGAAGATTTGCAT 176352 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || || | ||| | ||||||||| |||||| ||||||||| || || || || | Sbjct 177264 TACCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTATAGTCCG 177205 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | || || ||||| || || || | || || || | || Sbjct 177204 CGAGAGTTCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGTCTCTGCTGGTCTGGGG 177145 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| ||| || ||| ||||| | || || || ||||| | Sbjct 177144 GAATTCCTTCTTTGTCTTGAATCTTAGCCTTGACATTATCGATGGTGTCGGAGCTTTCCA 177085 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | ||||| || |||||||| | ||| |||||||| |||||||| Sbjct 177084 CCTCCAGAGTAATTGTCTTACCCGTGAGGGTCTTCACGAAGATCTGCAT 177036 Score = 95.1 bits (104), Expect = 8e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || ||||| || | |||||| ||||| ||| |||||| || || |||||||| | Sbjct 182324 CCTCCCCTCAACCGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCA 182265 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | || ||||| ||||| || | | || || || | |||| Sbjct 182264 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 182205 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || || ||| ||| || ||||||||| | || ||||| | || || || Sbjct 182204 ATTCCCTCCTTATCCTGAATCTTGGCCTTCACATTGTCGATGGTATCGCTGCTCTCGACC 182145 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || | || || || || ||||||| || ||||| || ||||||||||| Sbjct 182144 TCGAGCGTGATGGTCTTTCCCGTCAGCGTCTTCACAAAGATCTGCATGTT 182095 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || ||||||||||| | ||||||||| |||||| ||||||||| || ||||| | Sbjct 182784 CATT-CCTCCTCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGT 182726 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | | | | || | || || | || || || || || || || | || || || | Sbjct 182725 CTGCGAGAGTGCGGCCATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTG 182666 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | ||||| |||||| |||||| |||||| || | || || || |||| Sbjct 182665 GTGGAATCCCTTCCTTGTCCTGGATTTTTGCCTTCACGTTGTCCACGGTGTCGGAGCTTT 182606 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || | || || || || || || | ||| |||||||| || ||||| Sbjct 182605 CCACCTCGAGAGTGATCGTCTTTCCTGTGAGGGTCTTCACGAAGATTTGCAT 182554 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 || || |||| || ||||||||||| ||| | || ||| |||||||| |||||||| Sbjct 183562 TTTCCTCCTCGCAGACGCAACACCAGATGCAACGTCGACTCTTTTTGAATGTTGTAATCG 183503 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 | || ||| | || || | || || || || || || | || || || |||| Sbjct 183502 GCCAGTGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCGGGA 183443 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | || || |||||| ||||| |||||||| | || || || || || Sbjct 183442 GGAATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTGTCGATGGTGTCAGAGCTCTCC 183383 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| | || || ||||| ||||||| || || ||||| || ||||| Sbjct 183382 ACTTCCAGAGTGATGGTTTTCCCCGTCAGAGTCTTGACGAAGATTTGCAT 183333 >seq4073 Length=488838 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||| | | ||| ||||||||||| || |||||||| || |||||||| | Sbjct 173455 TACCTCCTCTGAGCCTCAAAACCAAATGAAGCGTCGATTCCTTTTGGATGTTGTAATCCG 173514 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 || | || | || || | || || |||||||| || || | || || || | | Sbjct 173515 CCAGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAG 173574 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || |||||| |||||| ||||||||| | || || || || || | Sbjct 173575 GAATCCCCTCCTTGTCCTGAATTTTGACCTTCACATTGTCGATCGTGTCAGAGCTCTCGA 173634 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || || || |||||||| || ||||| |||||||| Sbjct 173635 CCTCCAACGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 173683 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || ||||||| | |||||||||||| ||||| |||||| || || |||||||| | | Sbjct 173685 CCGCCTCTCAGTCTCAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCC 173744 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || || | || || |||||||| || | | || || || | ||| Sbjct 173745 AGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGG 173804 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || ||||| ||| || |||||||| | || ||||| || || || Sbjct 173805 ATCCCCTCCTTGTCTTGAATCTTAACTTTCACATTATCGATCGTATCGGAGCTCTCCACC 173864 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || || || ||||||| || ||||||||||||||||| Sbjct 173865 TCCAACGTGATGGTCTTCCCCGTCAGCGTCTTCACGAATATCTGCAT 173911 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||| | ||| | ||| | ||| || || ||| || || ||||| || || | Sbjct 173227 TACCTCCTCTGAGACGGAGCACAAGATGCAGGGTAGACTCTTTCTGTATATTATAGTCTG 173286 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 || | || | || || | || || ||||| || || | | || ||||| | | Sbjct 173287 CCAGAGTTCGCCCATCTTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGATCAGGAG 173346 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||||||| ||||| ||| || || | || || || ||||| | Sbjct 173347 GGATTCCTTCTTTGTCCTGGATTTTCGCCTTGACGTTGTCGATCGTGTCGGAGCTTTCCA 173406 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| ||||| || || || |||||||| || || || |||||||| Sbjct 173407 CCTCTAAAGTAATGGTCTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 173455 >seq3764 Length=349696 Score = 89.7 bits (98), Expect = 3e-13 Identities = 60/67 (90%), Gaps = 5/67 (7%) Strand=Plus/Plus Query 25930 TAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAG 25984 |||||||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct 104 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 163 Query 25985 ATGACGA 25991 ||||||| Sbjct 164 ATGACGA 170 >seq3072 Length=975934 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||||||||||| | |||||||||||| || || || ||||| || ||||| || | Sbjct 271582 ACCACCTCTCAGCCTCAACACCAAATGGAGGGTAGATTCGTTTTGGATGTTGTAGTCGGC 271523 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 ||| | | || || | ||| ||||||||||| || | | || ||||| | || Sbjct 271522 CAACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGG 271463 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || |||||| |||||| ||| || ||||| || | | || || || || || Sbjct 271462 GATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTCTCCAC 271403 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | || || || || ||||| | || ||| ||||| || |||||| Sbjct 271402 CTCAAGAGTTATGGTCTTGCCCGTGAGGGCTTTAACGAAGATTTGCATG 271354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334930312066847