Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4073 152 4e-32 seq487 149 5e-31 seq2625 129 5e-25 seq4017 118 9e-22 seq3072 104 2e-17 >seq4073 Length=488838 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| | || || ||| ||| Sbjct 173683 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAGACCATCACGTTGGAGGTCGAGAGCTCT 173624 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| ||||| ||||| || |||||||| |||||||| Sbjct 173623 GACACGATCGACAATGTGAAGGTCAAAATTCAGGACAAGGAGGGGATTCCTCCTGACCAG 173564 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||||||||| || | || |||| ||||||| ||| |||||||| Sbjct 173563 CAGAGGCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAAC 173504 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| ||||| ||||| ||||| || | ||||| |||||||| Sbjct 173503 ATCCAAAAGGAATCGACGCTTCATTTGGTTTTGAGGCTCAGAGGAGG 173457 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| ||||| || ||||| |||| || || ||||||| | || |||||| || Sbjct 173911 ATGCAGATATTCGTGAAGACGCTGACGGGGAAGACCATCACGTTGGAGGTGGAGAGCTCC 173852 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| |||| | || | ||| ||||| || ||||| || |||||||| Sbjct 173851 GATACGATCGATAATGTGAAAGTTAAGATTCAA-GACAAGGAGGGGATCCCTCCTGACCA 173793 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||||||||| || | || |||| ||||||| ||| |||||||| Sbjct 173792 GCAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTGGCGGATTACAA 173733 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || || || || ||||| ||| | || || ||||| || Sbjct 173732 CATCCAGAAGGAGTCGACTCTCCATTTGGTGTTGAGACTGAGAGGCGG 173685 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || || |||| || | || ||||| || Sbjct 173455 ATGCAGATTTTTGTCAAGACCTTGACTGGCAAGACCATTACTTTAGAGGTGGAAAGCTCC 173396 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| |||||| ||||||||||| || || ||||| || Sbjct 173395 GACACGATCGACAACGTCAAGGCGAAAATCCAGGACAAAGAAGGAATCCCTCCTGATCAG 173336 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || || ||||| || || | ||||||| || ||| ||| || || ||| Sbjct 173335 CAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGATGGGCGAACTCTGGCAGACTATAAT 173276 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| || || || ||| | ||||| | || |||||||| Sbjct 173275 ATACAGAAAGAGTCTACCCTGCATCTTGTGCTCCGTCTCAGAGGAGG 173229 >seq487 Length=466406 Score = 149 bits (164), Expect = 5e-31 Identities = 177/237 (75%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || |||||| |||| || ||| ||||||| | ||||||||| || Sbjct 183332 AATGCAAATCTTCGTCAAGACTCTGACGGGGAAAACCATCACTCTGGAAGTGGAGAGCTC 183391 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||| ||||| || || |||| |||| || ||||| || || ||||| || || Sbjct 183392 TGACACCATCGA--CAATGTGAAAGCCAAAATCCAG-GACAAGGAGGGAATTCCTCCCGA 183448 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | || || || ||||| || | ||||||| ||| || ||| |||||| Sbjct 183449 CCAGCAGCGATTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACACTGGCCGATTA 183508 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 ||| ||||||||||| || ||| | ||| | ||| | | || |||||||||| || Sbjct 183509 CAACATTCAAAAAGAGTCGACGTTGCATCTGGTGTTGCGTCTGCGAGGAGGAAACTA 183565 Score = 122 bits (134), Expect = 8e-23 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| |||| || ||| ||||||| |||| |||||| || Sbjct 176808 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAAACCATCACCCTCGAGGTGGAGAGCTCC 176867 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||||||||| |||| |||| || ||| ||||| || || || || ||||| Sbjct 176868 GACACTATCGACAACGTCA---AAGC-CAAGATCCAGGACAAGGAGGGAATCCCCCCTGA 176923 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| || | || || ||||| || || || ||||||| ||||| | | || || Sbjct 176924 CCAGCAGAGGTTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGCACCCTCGCAGACTA 176983 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || ||||| || || || || ||||| ||||| | || || ||||| Sbjct 176984 CAACATCCAAAAGGAGTCTACTCTCCATTTGGTGCTTCGTCTGAGGGGAGG 177034 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | || || || | ||||| |||| ||||| || Sbjct 182554 ATGCAAATCTTCGTGAAGACCCTCACAGGAAAGACGATCACTCTCGAGGTGGAAAGCTCC 182613 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| | || ||||| ||||||| ||||| |||||||||||||| ||||| Sbjct 182614 GACACCGTGGACAACGTGAAGGCAAAAATCCAGGACAAGGAAGGGATTCCACCAGACCAG 182673 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || || || || || || | ||||||| |||||| | | || ||||| Sbjct 182674 CAGAGGCTGATCTTCGCTGGTAAGCAGCTCGAAGATGGCCGCACTCTCGCAGACTACAAC 182733 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || ||||| || ||||| || ||||| ||||| | | |||||||||| Sbjct 182734 ATCCAAAAGGAGTCCACTCTCCATTTGGTGCTCCGTTTGAGAGGAGGAA 182782 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || ||||| || ||||||| ||| | ||||| | ||||||||| || Sbjct 182781 AATGCAGATCTTCGTAAAAACGCTGACCGGCAAAACGATCACTCTGGAAGTGGAGAGCTC 182840 Query 25058 TGACACTATCGA-GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| | | |||| || | ||| ||||| || || ||||| ||||| | Sbjct 182841 CGACACTATCGACAACGTTAAAGCTAAGATTCA-GGACAAGGAGGGCATTCCTCCTGATC 182899 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || | | || || || || || || | ||||||| ||| || | | || |||| Sbjct 182900 AGCAAAGATTGATCTTCGCTGGTAAGCAGCTCGAAGATGGTCGTACCCTCGCAGACTACA 182959 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| || ||||| || ||||| ||||| | || || ||||| Sbjct 182960 ACATCCAAAAGGAGTCCACTCTCCATTTGGTGCTTCGTCTCAGGGGAGG 183008 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || |||||||| || || | ||||| | || || || || Sbjct 177264 ATGCAAATCTTCGTCAAAACTTTGACTGGAAAGACGATCACTCTTGAGGTAGAAAGCTCG 177323 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| |||| || || | ||| ||||| ||||||||||| || ||||| Sbjct 177324 GATACGATCGATAATGTGAAAGCTAAGATTCAG-GACAAGGAAGGGATTCCCCCAGACCA 177382 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || || || || || | ||||||| || ||| | | || ||||| Sbjct 177383 GCAGAGGCTGATCTTCGCTGGAAAGCAGCTCGAAGATGGCCGAACTCTCGCGGACTACAA 177442 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || ||||| || ||||| ||||| | || || ||||| Sbjct 177443 CATCCAGAAGGAGTCCACTCTCCATTTGGTGCTGCGTCTCAGGGGAGG 177490 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || ||||| | || || | || ||||| || Sbjct 177036 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACAATTACTCTGGAGGTGGAAAGCTCC 177095 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| | || || | ||| ||||||||||| ||||| || || Sbjct 177096 GACACCATCGATAATGTCA---AGGCTAAGATTCAA-GACAAAGAAGGAATTCCCCCAGA 177151 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| | | || || |||||||| || | ||||||| || ||| | | || || Sbjct 177152 CCAGCAGAGACTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGAACTCTCGCGGACTA 177211 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| || ||||| || ||||| ||||| | || || ||||| Sbjct 177212 TAACATCCAAAAGGAGTCCACTCTCCATTTGGTGCTTCGTCTCAGGGGAGG 177262 >seq2625 Length=346021 Score = 129 bits (142), Expect = 5e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||||||||| ||||||| | || |||||| ||| Sbjct 281791 ATGCAGATTTTTGTGAAGACATTGACCGGTAAGACCATCACTCTTGAGGTGGAGAGCTCT 281850 Query 25059 GACACTATCGAGTCACTG-AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || || || | || | ||| ||||| ||||| || || || || || Sbjct 281851 GACACGATTGACAACGTGAAAACGAAGATTCA-GGACAAGGAAGGCATCCCTCCAGATCA 281909 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | |||||||| || || ||| | || || | ||| || ||| ||| ||||| Sbjct 281910 GCAGAGGTTGATTTTTGCAGGAAAGCAACTTGAGGACGGTCGTACCTTGGCCGACTACAA 281969 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 |||||||| || || || || ||||| || | ||||| || ||||||| Sbjct 281970 CATTCAAAAGGAGTCTACCCTCCATTTGGTCTTGAGGCTGAGGGGAGGAA 282019 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| |||| || ||| |||| || |||| || ||| ||| Sbjct 280423 ATGCAAATTTTCGTTAAAACTCTGACGGGGAAAACCATTACCCTCGAGGTCGAGAGTTCT 280482 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| || || || || || || || || | Sbjct 280483 GACACCATCGA--CAATGTCAAGACTAAGATCCAGGATAAGGAGGGAATCCCCCCAGATC 280540 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || | || || |||||||||||| |||| || | || || ||| ||| |||| Sbjct 280541 AGCAGAGGTTGATCTTCGCCGGCAAACAACTAGAGGACGGCCGGACGCTGGCCGACTACA 280600 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | ||||| ||||| |||||||| ||| | || || || | || ||||| Sbjct 280601 ACATTCAGAAAGAGTCCACGCTTCATCTTGTTCTGAGATTGAGGGGAGG 280649 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || ||||| || || | || || | || || ||| || Sbjct 281335 ATGCAGATTTTCGTCAAAACCTTGACTGGCAAGACGATTACTTTGGAGGTTGAGAGTTCC 281394 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || || | |||| ||| ||||| || || ||||| || ||| Sbjct 281395 GACACCATTGA--CAATGTGAAAACCAAAATTCAA-GACAAGGAGGGAATTCCTCCAGAC 281451 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| | | ||||||||||| ||||| | ||||||| ||| || | | ||||||| Sbjct 281452 CAGCAGAGATTGATTTTTGCCGGGAAACAGCTTGAAGATGGTCGGACACTCGCCGATTAC 281511 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| ||||| || | ||||| || || ||||| |||||||| Sbjct 281512 AACATCCAAAAGGAATCTACCTTGCATTTGGTCCTGAGGCTGAGAGGAGG 281561 Score = 105 bits (116), Expect = 6e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || | ||||| || |||| || | || |||||| ||| Sbjct 281563 ATGCAAATCTTCGTTAAAACCCTCACCGGCAAGACCATAACTCTTGAGGTGGAGAGCTCT 281622 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || | || |||| | || | ||| ||||| ||||| || || || || | Sbjct 281623 GACACGATTGA-TAACGTGAAAACGAAGATTCAG-GACAAGGAAGGCATCCCTCCAGATC 281680 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || | ||||||||||| || ||| | || |||| | || ||| ||| |||| Sbjct 281681 AGCAGAGGTTGATTTTTGCCGGAAAGCAACTTGAGGATGGGAGGACGTTGGCCGACTACA 281740 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| ||||| || || ||||| || | ||||| ||||| || Sbjct 281741 ACATCCAAAAGGAATCTACCCTCCATTTGGTTTTGAGGCTGAGAGGTGG 281789 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || || || | ||||| | || || || || Sbjct 281107 ATGCAGATTTTCGTCAAGACTCTTACAGGGAAGACTATCACCCTGGAGGTTGAAAGCTCC 281166 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || |||||||| ||||| || ||| || || ||||| |||||||| || || Sbjct 281167 GATACTATCGACAACGTGAAGACTAAGATCCAAGATAAGGAAGGAATTCCACCAGATCAG 281226 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 |||||| | ||||||||||| || || || || || | || || ||| || ||||| Sbjct 281227 CAGCGGTTGATTTTTGCCGGTAAGCAGTTGGAGGACGGCCGAACGCTGGCTGACTACAAC 281286 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || ||||| || ||| | ||| | || | || ||||| Sbjct 281287 ATCCAAAAGGAGTCCACTCTCCATCTGGTGTTGAGATTGAGGGGAGG 281333 >seq4017 Length=874442 Score = 118 bits (130), Expect = 9e-22 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| ||||| | || || |||| |||||| ||| Sbjct 472203 ATGCAGATCTTCGTCAAGACTTTGACGGGTAAGACAATTACCCTCGAGGTGGAGAGCTCT 472262 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || ||| | |||| ||| || || || || ||||| || ||| Sbjct 472263 GACACCATCGA--CAATGTAAAGACTAAAATTCA-AGATAAGGAGGGTATTCCCCCAGAC 472319 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || ||||||||||| || | || |||| | || ||| |||||| Sbjct 472320 CAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGAAGGACGCTGGCTGATTAC 472379 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| || ||||| || || | || || || || |||||||| Sbjct 472380 AACATCCAAAAGGAGTCCACCCTTCACCTGGTTCTGAGACTGAGAGGAGG 472429 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || | ||||| |||| || || ||| Sbjct 473571 ATGCAGATCTTCGTGAAGACCTTGACCGGGAAGACTATCACTCTCGAGGTCGAAAGCTCT 473630 Query 25059 GACACTATCGAGTCACTGAAGCAA--AAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || || || ||| ||||| ||||| ||||| || || | Sbjct 473631 GACACCATCGA--CAATGTCAAAACCAAGATCCAGGACAAGGAAGGAATTCCTCCCGATC 473688 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| | | || ||||| || || || | ||||||| || || ||| ||||||| Sbjct 473689 AGCAGAGATTGATCTTTGCAGGAAAGCAGCTGGAAGATGGACGAACCCTGGCGGATTACA 473748 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||| ||||||||||| || || ||| | || || ||||| |||| || Sbjct 473749 ATATCCAAAAAGAATCAACTCTGCATCTTGTTCTGAGGCTGCGAGGTGG 473797 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || ||| ||||||| | || || || || Sbjct 473343 ATGCAGATCTTTGTCAAGACATTGACTGGAAAAACCATCACTTTGGAGGTTGAAAGCTCA 473402 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| ||||| ||| ||| || || || || ||||| || ||||| Sbjct 473403 GATACCATCGACAACGTGAAGACAAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCAG 473462 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || |||||||| || || | || |||| ||| || ||| || || ||| Sbjct 473463 CAGCGATTGATCTTTGCCGGTAAGCAGCTCGAGGATGGTCGTACCTTGGCAGACTATAAT 473522 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| ||||| || | ||| | |||||| | | || ||||| Sbjct 473523 ATTCAAAAGGAATCTACCTTGCATCTTGTGCTACGATTGAGGGGAGG 473569 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| |||| || || | || || | || |||||| ||| Sbjct 472887 ATGCAGATTTTCGTGAAGACTCTGACAGGCAAGACTATAACCTTGGAGGTGGAGAGTTCT 472946 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| ||||| |||||| || || || || ||||| || || || Sbjct 472947 GACACTATCGACAATGTGAAGACTAAAATCCAAGATAAGGAGGGTATTCCTCCAGATCAG 473006 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | ||||||| | || ||| ||| ||||| Sbjct 473007 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAAGATGGAAGGACCCTGGCCGACTACAAC 473066 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || || || || || | || || ||| | ||||| || Sbjct 473067 ATCCAAAAGGAGTCTACCCTTCACCTCGTCCTGAGGTTGAGAGGTGG 473113 >seq3072 Length=975934 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 25000 TGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTG 25059 |||| || ||||| ||||| ||||||||||| ||||||| | || || ||| || | Sbjct 271584 TGCAGATTTTTGTGAAGACATTGACCGGTAAGACCATCACTCTTGAGGTTGAGAGCTCCG 271643 Query 25060 ACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||| || || ||||| | || | ||| || ||||| || |||||||| ||||| Sbjct 271644 ACACGATTGACAACGTGAAGACCAAGATTCA-AGATAAAGAGGGCATTCCACCAGACCAG 271702 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 |||| | ||||| || || || ||| | || || | ||| || ||| || || || Sbjct 271703 CAGCTTTTAATTTTCGCTGGGAAGCAACTTGAGGACGGTCGTACCTTGGCCGGCTAAAAC 271762 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || ||||| || || || || ||||| || | ||||| || | ||||| Sbjct 271763 ATCCAAAAGGAGTCTACCCTCCATTTGGTCTTGAGGCTGAGGGAAGGAA 271811 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || | | || || || |||| || | || |||||| ||| Sbjct 271355 ATGCAAATCTTCGTTAAAGCCCTCACGGGCAAGACCATAACTCTTGAGGTGGAGAGCTCT 271414 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || |||| | || | ||| ||||| ||||| || || || || || Sbjct 271415 GACACGATTGACAACGTGAAAACGAAGATTCAG-GACAAGGAAGGCATCCCTCCAGATCA 271473 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | ||||||||||| || ||| | || |||| | || ||| ||| ||||| Sbjct 271474 GCAGAGGTTGATTTTTGCCGGAAAGCAACTTGAGGATGGGAGGACGTTGGCCGACTACAA 271533 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| ||||| || || ||||| ||| | ||||| ||||| || Sbjct 271534 CATCCAAAACGAATCTACCCTCCATTTGGTGTTGAGGCTGAGAGGTGG 271581 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/230 (70%), Gaps = 10/230 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || ||||| ||||| | ||||| || || ||| || Sbjct 271131 ATGCAGATCTTCGTCAAAACCTTGACTGGTAAGACGATCACTTCGGAGGTTGAGAGTTCC 271190 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||| |||| || || || | |||| ||| ||||| || || |||| | ||| Sbjct 271191 GACA---TCGA--CAATGTGAAAACCAAAATTCAA-GACAAGGAGGGAATTCTTCTAGAC 271244 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| | ||||||||||| ||||| | ||||||| ||| || | | ||||||| Sbjct 271245 CAGCAGAAATTGATTTTTGCCGGGAAACAGCTTGAAGATGGTCGGACACTCGCCGATTAC 271304 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | | || ||| ||||| || | ||||| || || ||||| |||||||| Sbjct 271305 TACA-TCCAAAGGAATCTACCTTGCATTTGGTCCTGAGGCTGAGAGGAGG 271353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433306151737655