Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2625 122 7e-23 seq487 116 3e-21 seq4017 113 4e-20 seq4073 104 2e-17 seq3072 104 2e-17 seq3627 84.2 2e-11 >seq2625 Length=346021 Score = 122 bits (134), Expect = 7e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || |||| || ||||| | |||||||| ||||| |||||||||||| Sbjct 281564 ATACCTCCTCTCAGCCTCAGGACCAAATGCAAGGTAGATTCCTTTTGGATGTTGTAATCG 281505 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||||||||| ||||| || || | || | | ||| ||||| ||| Sbjct 281504 GCGAGTGTCCGACCATCTTCAAGCTGTTTCCCGGCAAAAATCAATCTCTGCTGGTCTGGA 281445 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTC 114331 ||||| || || ||||| ||| ||| ||||| | | |||| |||||||| || Sbjct 281444 GGAATTCCCTCCTTGTCTTGAAT-TTTGGTTTTCACATTGTCAATGGTGTCGGAACTCTC 281386 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||| ||||| |||| ||||| || ||||||||||| Sbjct 281385 AACCTCCAAAGTAATCGTCTTGCCAGTCAAGGTTTTGACGAAAATCTGCAT 281335 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || ||||| || ||||| | ||||| || |||||||||||||| ||| || |||||| Sbjct 282008 AGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCCAAGGTACGA 281949 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 || |||||||| || || || | || | | ||| || || ||||| |||||||| Sbjct 281948 CCGTCCTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGGATGCCTTCC 281889 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| |||||| ||| | | |||| ||||| | | || || || | || Sbjct 281888 TTGTCCTGAATCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTCTCCACCTCAAGAGTG 281829 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || ||||||| || || |||||||||||||| Sbjct 281828 ATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCAT 281791 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || ||||| || | ||| | || || |||||||| |||||||| ||| Sbjct 280424 ATACCTCCTCGCAGCCTCAACACAAGATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCG 280365 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||||| ||||||||||| ||| | || | ||||| ||||| || Sbjct 280364 GCCAGCGTGCGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCGCTGCTGGTCAGGG 280305 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGT-TTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 |||||||| || || || ||| ||| || || | | || | || || | | ||| Sbjct 280304 GGAATGCCCTCCTTATCTTGAAT-TTTCGTCTTCACATTGTCGATCGTATCAGAGCTTTC 280246 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| || | || | || || || || || || || || || |||||||| Sbjct 280245 GACCTCAAGAGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 280195 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 ||||| ||| | ||| | ||| || ||||| ||||||||||| ||| || || || Sbjct 280638 TCTCAGAACAAGATGAAGCGTGGACTCTTTCTGAATGTTGTAGTCGGCCAGCGTCCGGCC 280579 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 || || |||||||| || ||| |||| | | ||| || || || || || || || || Sbjct 280578 GTCCTCTAGTTGTTTGCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATTCCCTCCTT 280519 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 || ||||| || | | || | |||||| | ||||| || | ||| | Sbjct 280518 ATCCTGGATCTTAGTCTTGACATTGTCGATGGTGTCAGAACTCTCGACCTCGAGGGTAAT 280459 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || ||||||||||| || ||||| ||||| Sbjct 280458 GGTTTTCCCCGTCAGAGTTTTAACGAAAATTTGCAT 280423 >seq487 Length=466406 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || ||||| |||||||| || | |||||| |||||| Sbjct 182990 ACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCGAGGGTACGACCATCTTCG 182931 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || ||||||||| |||| | | || || || ||||||||||| || ||||| | Sbjct 182930 AGCTGCTTACCAGCGAAGATCAATCTTTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGA 182871 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| ||| | | || | ||||||| | || || |||| || | ||||||| Sbjct 182870 ATCTTAGCTTTAACGTTGTCGATAGTGTCGGAGCTCTCCACTTCCAGAGTGATCGTTTTG 182811 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||||||| |||||||| || |||||||| Sbjct 182810 CCGGTCAGCGTTTTTACGAAGATCTGCAT 182782 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || || | ||| || | ||| | ||| || ||||||||||||||||||||| | Sbjct 183559 CCTCCTCGCAGACGCAACACCAGATGCAACGTCGACTCTTTTTGAATGTTGTAATCGGCC 183500 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| |||||| || || || |||||| |||| | ||||| ||||| |||||| Sbjct 183499 AGTGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCGGGAGGA 183440 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || || ||||| || || ||| | | || | |||||| | | || || Sbjct 183439 ATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTGTCGATGGTGTCAGAGCTCTCCACT 183380 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | ||||| || |||||||| || || || || ||||| Sbjct 183379 TCCAGAGTGATGGTTTTCCCCGTCAGAGTCTTGACGAAGATTTGCAT 183333 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || ||||| |||||||| || | ||| || ||||| | ||| || ||| Sbjct 176320 GTCGACTCCTTTTGGATGTTGTAGTCCGCGAGAGTTCGGCCGTCTTCCAATTGCTTGCCA 176261 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | || || | ||| ||||| || ||||| || || ||||| |||||| ||| Sbjct 176260 GCGAAAATCAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGAATCTTAGCTTTC 176201 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| | || || || | ||| | || |||||||||||||| Sbjct 176200 ACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTC 176141 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 176140 TTGACGAAGATCTGCAT 176124 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || ||||| |||||||| || | ||| || || || Sbjct 176788 ACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCAAGAGTTCGGCCGTCCTCG 176729 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || ||||| || |||| || | ||| ||||| |||||||| || || ||||| | Sbjct 176728 AGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGA 176669 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 || || ||| | | |||| ||| |||| | ||| || || | || | || || Sbjct 176668 ATTTTGGCTTTGACGTTATCAATGGTATCGGAGCTTTCTACTTCTAAAGTGATAGTCTTA 176609 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || ||||| |||||||||||||| Sbjct 176608 CCGGTGAGTGTTTTCACAAAAATCTGCAT 176580 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | ||||| || || ||||||||||| || | || || |||||| Sbjct 177700 ACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCGAGGGTGCGGCCATCTTCG 177641 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || || |||||| |||| || | ||| ||||| || ||||| ||||| ||||| | Sbjct 177640 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGA 177581 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | || | || || | | ||| || |||| || | || ||| Sbjct 177580 ATCTTGGCCTTCACATTATCGATCGTATCCGAGCTTTCTACCTCCAGAGTGATGGTCTTG 177521 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||||||||| || || || || ||||| Sbjct 177520 CCGGTCAGAGTCTTGACGAAGATTTGCAT 177492 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || ||||| ||||| || || | ||| || |||||| Sbjct 177244 ACCAAATGGAGAGTGGACTCCTTTTGGATGTTATAGTCCGCGAGAGTTCGGCCATCTTCG 177185 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || || || ||| |||| || | ||| ||||| || ||||| ||||||||||| | Sbjct 177184 AGCTGCTTGCCGGCGAAGATCAGTCTCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGA 177125 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | || | |||||||| | ||| || |||| || | || || Sbjct 177124 ATCTTAGCCTTGACATTATCGATGGTGTCGGAGCTTTCCACCTCCAGAGTAATTGTCTTA 177065 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || || || || |||||||| Sbjct 177064 CCCGTGAGGGTCTTCACGAAGATCTGCAT 177036 >seq4017 Length=874442 Score = 113 bits (124), Expect = 4e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229 ||| || | ||| | ||||| || ||||| ||||| || ||| || ||| | ||| Sbjct 473327 CAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTATAGTCGGCCAAAGTCCTGCCATC 473268 Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 ||| || ||||| |||||| |||| | ||||| ||||| || ||||||||||| ||||| Sbjct 473267 TTCGAGCTGTTTCCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 473208 Query 114290 GGCAATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCG 114348 ||| ||| || || | | || | |||||||| || || |||| ||| | | Sbjct 473207 TTGAAT-TTTGGTCTTCACATTGTCGATGGTGTCGGAACTCTCCACCTCCAAGGTGATGG 473149 Query 114349 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| |||||||| || || ||||||||||| Sbjct 473148 TCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 473115 Score = 95.1 bits (104), Expect = 1e-14 Identities = 166/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 114142 ACCATTTACAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAA 114201 || ||||||| | || || || || |||| ||| | ||| | || ||||||||||| | Sbjct 473809 ACGATTTACAGA--CCACCTCGCAGCCTCAGAACAAGATGCAGAGTTGATTCTTTTTGGA 473752 Query 114202 TGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCT 114261 | |||||||| || || || |||||| || || || || || |||| | | || Sbjct 473751 TATTGTAATCCGCCAGGGTTCGTCCATCTTCCAGCTGCTTTCCTGCAAAGATCAATCTCT 473692 Query 114262 GTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGT 114321 | || || |||||||| ||||| ||||| ||||| ||| | | || | ||||| Sbjct 473691 GCTGATCGGGAGGAATTCCTTCCTTGTCCTGGATCTTGGTTTTGACATTGTCGATGGTGT 473632 Query 114322 CGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 114381 | | | |||||| || | || | || || ||||||| || || || || ||||||| Sbjct 473631 CAGAGCTTTCGACCTCGAGAGTGATAGTCTTCCCGGTCAAGGTCTTCACGAAGATCTGCA 473572 Query 114382 T 114382 | Sbjct 473571 T 473571 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | ||||||| ||| | || | || || || ||||| ||||||||||| Sbjct 472432 ATACCTCCTCTCAGTCTCAGAACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCA 472373 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | ||| ||||| || || || || |||| |||||||| ||||| || Sbjct 472372 GCCAGCGTCCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGG 472313 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGT-TTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 ||||| || || || || ||| ||| || |||| | || | |||||| | | || Sbjct 472312 GGAATACCCTCCTTATCTTGAAT-TTTAGTCTTTACATTGTCGATGGTGTCAGAGCTCTC 472254 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || |||| ||| || || || |||||||| Sbjct 472253 CACCTCGAGGGTAATTGTCTTACCCGTCAAAGTCTTGACGAAGATCTGCAT 472203 >seq4073 Length=488838 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| |||||||| ||||| | ||| || |||||| ||||| ||||| Sbjct 172803 GTGGACTCTTTCTGAATGTTATAATCTGCAAGAGTTCGCCCATCTTCGAGTTGCTTACCG 172862 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | | ||| || || |||||||| ||||| ||||| |||||| ||| Sbjct 172863 GCGAAGATCAACCTCTGCTGATCGGGAGGAATACCTTCCTTGTCCTGAATCTTCGCTTTG 172922 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| | | ||||| |||| || | || ||||||||||| ||| Sbjct 172923 ACGTTGTCGATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTCTTGCCGGTCAGTGTT 172982 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 172983 TTCACGAAGATTTGCAT 172999 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || |||||||| ||||| | ||| ||||| ||||| ||||||||||| Sbjct 173454 ATACCTCCTCTGAGCCTCAAAACCAAATGAAGCGTCGATTCCTTTTGGATGTTGTAATCC 173513 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| ||| ||| || || || || || || |||| || | ||| ||||| ||| Sbjct 173514 GCCAGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGA 173573 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||| || || | | || | ||||| | | ||| Sbjct 173574 GGAATCCCCTCCTTGTCCTGAATTTTGACCTTCACATTGTCGATCGTGTCAGAGCTCTCG 173633 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || |||| || || || ||||||||||| Sbjct 173634 ACCTCCAACGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 173683 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || ||||| | |||||||| || ||||| | || || || || || ||||||||||| Sbjct 173682 ATCCCGCCTCTCAGTCTCAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAATCC 173741 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| ||| ||| || || || || || || |||| | | ||| ||||| ||| Sbjct 173742 GCCAGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGA 173801 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| ||| | | || | || |||| | || Sbjct 173802 GGGATCCCCTCCTTGTCTTGAATCTTAACTTTCACATTATCGATCGTATCGGAGCTCTCC 173861 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || ||||| || || || || |||||||| Sbjct 173862 ACCTCCAACGTGATGGTCTTCCCCGTCAGCGTCTTCACGAATATCTGCAT 173911 >seq3072 Length=975934 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || ||||| || ||||| | ||||| || ||||| ||||| || || || |||||| Sbjct 271800 AGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGGATGTTTTAGCCGGCCAAGGTACGA 271741 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 || |||||||| || |||||| | || | | |||| ||||| || |||||||| ||| Sbjct 271740 CCGTCCTCAAGTTGCTTCCCAGCGAAAATTAAAAGCTGCTGGTCTGGTGGAATGCCCTCT 271681 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 || || |||||| || | | |||| ||||||| | || || || | || Sbjct 271680 TTATCTTGAATCTTGGTCTTCACGTTGTCAATCGTGTCGGAGCTCTCAACCTCAAGAGTG 271621 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 114381 | || || ||||||| || || ||||||||||||| Sbjct 271620 ATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCA 271584 >seq3627 Length=715207 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| ||||| | || | || | ||||| || |||||||||||||| ||| Sbjct 381959 CCTCCACGAAGTCTGAGCACAAGGTGCAAGGTAGACTCCTTTTGAATGTTGTAGTCGGCA 381900 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| ||| |||||| || || || || ||| |||| | ||||| || ||||||||| Sbjct 381899 AGAGTGCGACCATCTTCCAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGATCCGGAGGA 381840 Query 114276 ATGCCTTCTTTGTC 114289 || || || ||||| Sbjct 381839 ATCCCCTCCTTGTC 381826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420113216954844