Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq487 156 5e-33 seq4017 118 1e-21 seq4073 114 1e-20 seq2625 107 2e-18 seq3072 93.3 5e-14 seq824 82.4 8e-11 >seq487 Length=466406 Score = 156 bits (172), Expect = 5e-33 Identities = 174/231 (75%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||| | ||||||||||| |||||| || ||| |||||||| |||||||| ||| Sbjct 183559 CCTCCTCGCAGACGCAACACCAGATGCAACGTCGACTCTTTTTGAATGTTGTAATCGGCC 183500 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || |||||||| |||||||| || | |||||||||||||| || Sbjct 183499 AGTGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCGGGAGGA 183440 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | |||||||||| |||||| ||| | | | | ||||| |||| ||| Sbjct 183439 ATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTGTCGATGGTGTCAGAGCTC---TCC 183383 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || | ||||||||||| ||||| || ||||| || |||||||||||| Sbjct 183382 ACTTCCAGAGTGATGGTTTTCCCCGTCAGAGTCTTGACGAAGATTTGCATT 183332 Score = 152 bits (168), Expect = 6e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| ||||| | ||||||||| | ||| ||||||||| || ||||| || || Sbjct 182780 CCTCCTCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCG 182721 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || || ||||||||||||||||| || || | ||||||||| | ||| Sbjct 182720 AGAGTGCGGCCATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 182661 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 42160 | | ||||||||| ||||||| || | ||| | |||| |||||| |||||| Sbjct 182660 ATCCCTTCCTTGTCCTGGATTTTTGCCTTCA-CGTTGTCCACGGTGTCGGAGCTTTCCAC 182602 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| ||||| || || || || || ||||| || ||||||||||| Sbjct 182601 CTCGAGAGTGATCGTCTTTCCTGTGAGGGTCTTCACGAAGATTTGCAT 182554 Score = 131 bits (144), Expect = 2e-25 Identities = 171/233 (73%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || | ||| | ||||||||| | ||| ||||||||| || ||||| || || Sbjct 183009 ACCTCCCCTGAGACGAAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGC 182950 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || ||||||||||||||||| || | || ||||| || | || Sbjct 182949 GAGGGTACGACCATCTTCGAGCTGCTTACCAGCGAAGATCAATCTTTGCTGATCAGGAGG 182890 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | || |||||||||| ||| | || | || | ||| | | | ||||| |||| | Sbjct 182889 AATGCCCTCCTTGTCC-TGAATCTTAGCTTTAACGTTGTCGATAGTGTCGGAGCTC---T 182834 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 |||| || | ||||| |||||||| || ||||| ||||| ||||| |||||| Sbjct 182833 CCACTTCCAGAGTGATCGTTTTGCCGGTCAGCGTTTTTACGAAGATCTGCATT 182781 Score = 120 bits (132), Expect = 3e-22 Identities = 168/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || | ||| | ||||||||| | || ||||||||| || ||||| || || Sbjct 177035 ACCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCTGC 176976 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || | ||||||||| ||||| || | | ||||||||| | || Sbjct 176975 GAGGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAGATCAACCTCTGCTGGTCAGGGGG 176916 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCG---CTCGATT 42156 | | |||||||||| ||| || ||||| ||| | | | |||||| ||| | Sbjct 176915 GATTCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGTTGTCGATAGTGTCGGAGCTC---T 176860 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| |||| |||||||||||||| || || ||||| || ||||| ||||| Sbjct 176859 CCACCTCGAGGGTGATGGTTTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 176808 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| ||||| | |||||||| | || |||||||| || ||||| || || Sbjct 176579 ACCTCCTCTCAAACGAAGAACCAAATGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGC 176520 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || |||| || | ||||| |||||||| || || | ||||||||| | || Sbjct 176519 AAGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGG 176460 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCA 42159 | | |||||||||| ||| || || | ||| | | | |||||| ||| | Sbjct 176459 AATTCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCGGAGCTTTCAA 176401 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | ||||| || |||||||| || ||||| || ||||||||||| Sbjct 176400 CCTCCAAAGTGATCGTCTTGCCCGTGAGGGTCTTCACGAAGATTTGCAT 176352 Score = 109 bits (120), Expect = 6e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || || || | ||||||||| | ||| ||||||||| || ||||| || || Sbjct 176807 ACCTCCCCTCAACCGAAGCACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCTGC 176748 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || |||| || ||||||||||| || || || || | ||||||||| | || Sbjct 176747 AAGAGTTCGGCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCTGGAGG 176688 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | | |||||||||| ||| |||| | ||||| | | | || ||| ||| | Sbjct 176687 AATTCCCTCCTTGTCC-TGAATTTTGGCTTTGACGTTATCAATGGTATCGGAGCTTTCTA 176629 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | ||||| || || || || || || || ||||| || ||||| Sbjct 176628 CTTCTAAAGTGATAGTCTTACCGGTGAGTGTTTTCACAAAAATCTGCAT 176580 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | ||| | ||||||||| | || |||||| ||||| ||||| || || Sbjct 177718 CCTCCCCTCAGACGAAGCACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCG 177659 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || |||||||| |||||||| || || | ||||||||| | || Sbjct 177658 AGGGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGA 177599 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGA---TTC 42157 | | ||||||||| ||| | || | || | | | | ||| || ||| ||| Sbjct 177598 ATTCCTTCCTTGTCC-TGAATCTTGGCCTTCACATTATCGATCGTATC---CGAGCTTTC 177543 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | |||||||| ||||| || || ||||| || ||||||||||| Sbjct 177542 TACCTCCAGAGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATTTGCAT 177492 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || | ||||| ||||||||| | ||| |||||| || || ||||| || || Sbjct 177491 ACCTCCCCTGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGC 177432 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || |||||||| |||||||| || || | ||||||||| | || Sbjct 177431 GAGAGTTCGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGG 177372 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGA---TT 42156 | | ||||||||| ||| | || | ||| | | | | ||| || ||| || Sbjct 177371 AATCCCTTCCTTGTCC-TGAATCTTAGCTTTCACATTATCGATCGTATC---CGAGCTTT 177316 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | ||||| || || || || | || || || ||||||||||| Sbjct 177315 CTACCTCAAGAGTGATCGTCTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 177264 >seq4017 Length=874442 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 ||| ||||| |||||||| ||||||||| || || |||||||||| |||| | | || Sbjct 472187 CAAGACCAAGTGCAATGTAGACTCCTTTTGGATGTTATAATCAGCCAATGTCCTCCCATC 472128 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || || ||||| || ||||| || || | ||||||||||| || | | ||||||||| Sbjct 472127 CTCGAGTTGCTTGCCGGCGAAAATCAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGTC 472068 Query 42116 CATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 42174 | ||| | || || | | | | | | | ||| ||| ||| || || | ||||||| Sbjct 472067 C-TGAATCTTGGTCTTAACATTGTCGATCGTATCGGAGCTTTCGACCTCAAGAGTGATGG 472009 Query 42175 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 | || ||||| | ||||| |||||||| ||||| || Sbjct 472008 TCTTCCCCGTCAATGTCTTCACAAAGATCTGCATCTT 471972 Score = 107 bits (118), Expect = 2e-18 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| | | || || | ||| | ||| ||||||||| || ||||| || || Sbjct 472886 ACCTCCTCTCAGCCTCAGTACGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGC 472827 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | |||| || |||||||| || ||||| || |||||||||||||| | || Sbjct 472826 AAGGGTCCTCCCGTCCTCAAGCTGCTTGCCTGCGAAGATTAGTCGCTGCTGGTCTGGAGG 472767 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTC 42157 | | ||||||||| |||||| || | | | | |||||| ||| || Sbjct 472766 GATACCCTCCTTGTCTTGGATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTC---TC 472710 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || | |||||||| ||||| || | ||||| || ||||| ||||| Sbjct 472709 CACCTCCAAGGTGATGGTCTTGCCAGTCAATGTCTTCACGAAGATCTGCAT 472659 Score = 105 bits (116), Expect = 7e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || |||||||| | ||| | || ||||||||| || || || || || Sbjct 473342 ACCACCTCTCAACCGCAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTATAGTCGGC 473283 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||||| | || || ||||| || |||||||| || | |||||||||||| | || Sbjct 473282 CAAAGTCCTGCCATCTTCGAGCTGTTTCCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 473223 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCG---CTCGATT 42156 | || ||||||| | ||| |||| || || | | | | |||||| ||| | Sbjct 473222 AATGCCTTCCTTGT-CTTGAATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTC---T 473167 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || | |||||||| ||||| || || ||||| || || || ||||| Sbjct 473166 CCACCTCCAAGGTGATGGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 473115 Score = 105 bits (116), Expect = 7e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || || || | ||| | |||||| || |||||||||||||| || || || Sbjct 473570 ACCTCCCCTCAATCGTAGCACAAGATGCAAGGTAGATTCCTTTTGAATATTATAGTCTGC 473511 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || ||||||||||| || || || | |||||||||||||| || Sbjct 473510 CAAGGTACGACCATCCTCGAGCTGCTTACCGGCAAAGATCAATCGCTGCTGGTCGGGAGG 473451 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | |||||| ||| || | ||||| | ||| | | | || || ||| || Sbjct 473450 AATACCCTCCTTATCC-TGGATCTTTGTCTTCACGTTGTCGATGGTATCTGAGCT---TT 473395 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | ||||||||||| || || | ||||| |||||||| ||||| Sbjct 473394 CAACCTCCAAAGTGATGGTTTTTCCAGTCAATGTCTTGACAAAGATCTGCAT 473343 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| | | || |||| || | ||| ||||||||| || ||||||||||| Sbjct 472430 ACCTCCTCTCAGTCTCAGAACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGC 472371 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||| |||| | || || |||||||| || || || || || ||||||||||| | || Sbjct 472370 CAGCGTCCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGG 472311 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTC---GCTCGATT 42156 | | |||||| | | ||| |||| || || | | | | ||||| |||| | Sbjct 472310 AATACCCTCCTTAT-CTTGAATTTTAGTCTTTACATTGTCGATGGTGTCAGAGCTC---T 472255 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| |||| || || || || ||||| | ||||| || ||||| ||||| Sbjct 472254 CCACCTCGAGGGTAATTGTCTTACCCGTCAAAGTCTTGACGAAGATCTGCAT 472203 Score = 93.3 bits (102), Expect = 5e-14 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | |||||| | || | || |||||||||||| ||||| || || Sbjct 472658 ACCACCTCTCAACCTCAACACGAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGC 472599 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 |||||| | |||| || ||||| ||||| ||||| || | ||||||||||| | || Sbjct 472598 CAGAGTTCTACCGTCCTCAAGCTGTTTACCTGCGAAGATCAAACGCTGCTGGTCTGGGGG 472539 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTC 42157 | | |||||| || ||| || || | | | | |||||| ||| || Sbjct 472538 AATACCCTCCTTATCTTGGATCTTAGTCTTCACATTATCGATGGTGTCGGAACTC---TC 472482 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| || ||||| || || || | |||||| || ||||||||||| Sbjct 472481 AACCTCGAGAGTAATGGTCTTTCCTGTCAACGTCTTGACGAAGATTTGCAT 472431 >seq4073 Length=488838 Score = 114 bits (126), Expect = 1e-20 Identities = 169/233 (73%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| | ||| | || | ||||| ||| ||| || ||||| || ||||| || Sbjct 173000 ACCTCCTCTGAGACGGAGGACAAGATGCAGGGTGGACTCTTTCTGAATGTTATAATCTGC 173059 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 |||||| ||| | || || ||||||||||| ||||| || | | ||||||||||| || Sbjct 173060 CAGAGTTCGCCCATCTTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGGTCGGGAGG 173119 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGAT 42155 | | ||||||||| ||| | || | ||||| ||| | | | ||||| |||| Sbjct 173120 AATACCTTCCTTGTCC-TGAATCTTCGCTTTGA-CGTTGTCGATGGTGTCCGAGCTC--- 173174 Query 42156 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || | |||||||| ||||| || | || || || ||||||||||| Sbjct 173175 TCGACCTCCAGAGTGATGGTCTTGCCGGTCAATGTTTTCACGAAGATTTGCAT 173227 Score = 104 bits (114), Expect = 3e-17 Identities = 166/232 (72%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | ||| | || | ||||| ||| ||| || ||||| || ||||| || Sbjct 172773 CCTCCTCTAAGACGGAGGACAAGATGCAGGGTGGACTCTTTCTGAATGTTATAATCTGCA 172832 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| ||| | || || || |||||||| ||||| || | | |||||| |||| || Sbjct 172833 AGAGTTCGCCCATCTTCGAGTTGCTTACCGGCGAAGATCAACCTCTGCTGATCGGGAGGA 172892 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCC-ACCGTGTC---GCTCGATT 42156 | | ||||||||| ||| | || | ||||| ||| | | | ||||| |||| | Sbjct 172893 ATACCTTCCTTGTCC-TGAATCTTCGCTTTGA-CGTTGTCGATGGTGTCCGAGCTC---T 172947 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | |||||||| ||||| || || || || || ||||||||||| Sbjct 172948 CGACCTCCAGAGTGATGGTCTTGCCGGTCAGTGTTTTCACGAAGATTTGCAT 172999 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| | ||| | ||| | ||||| || ||| || || ||||| || || || Sbjct 173228 ACCTCCTCTGAGACGGAGCACAAGATGCAGGGTAGACTCTTTCTGTATATTATAGTCTGC 173287 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 |||||| ||| | || || ||||||||||| ||||| || | | |||||| || | || Sbjct 173288 CAGAGTTCGCCCATCTTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGATCAGGAGG 173347 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | | || |||||| |||||| |||| ||| | | | ||||||| ||||| Sbjct 173348 GATTCCTTCTTTGTCCTGGATTTTCGCCTTGA-CGTTGTCGATCGTGTCGGAGCTTTCCA 173406 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | || ||||| ||||| || | ||||| ||||| || ||||| Sbjct 173407 CCTCTAAAGTAATGGTCTTGCCAGTCAAGGTCTTGACAAAAATCTGCAT 173455 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | | |||||||||||| | || |||||| || || |||||||| ||| Sbjct 173685 CCGCCTCTCAGTCTCAACACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCC 173744 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || || |||||||| || || || || | | ||||||||| | || Sbjct 173745 AGAGTGCGACCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGAGGG 173804 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | ||||||||| || || ||| | | | | ||| || |||| ||| Sbjct 173805 ATCCCCTCCTTGTCTTGAATCTTAACTTTCACATTATCGATCGTATCGGAGCTC---TCC 173861 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||||||| || ||||| |||||||| || || || ||||| Sbjct 173862 ACCTCCAACGTGATGGTCTTCCCCGTCAGCGTCTTCACGAATATCTGCAT 173911 >seq2625 Length=346021 Score = 107 bits (118), Expect = 2e-18 Identities = 165/230 (72%), Gaps = 9/230 (4%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||||| ||||||||||| || |||||||| || |||| | | || | || || Sbjct 280175 ACCAAATGCAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCCAAACTGCGACCATCCTCG 280116 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || ||||| || ||||| || | ||||||||||| | || | || |||||||||| | Sbjct 280115 AGTTGCTTGCCGGCGAAAATCAACCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 280056 Query 42120 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGT 42175 ||||| |||| ||| | | | || ||| ||| || || || | ||||| || Sbjct 280055 ATTTTGCTCTTGA-CGTTGTCGATGGTATCGGAACTC---TCGACCTCCAAAGTGATCGT 280000 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCACGCCGAATACAA 42225 || || || || ||||| || ||||| ||||| ||| | |||| |||| Sbjct 279999 CTTCCCTGTCAGAGTCTTCACGAAGATCTGCATCTTCTC-CCGACGACAA 279951 Score = 105 bits (116), Expect = 7e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||||| | | |||||| | |||||| ||| ||| ||||| || ||||| || || Sbjct 280422 ACCTCCTCGCAGCCTCAACACAAGATGCAAAGTGGACTCTTTTTGGATGTTGTAGTCGGC 280363 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||| || || |||| || || || ||||| ||||| || | ||||||||||| | || Sbjct 280362 CAGCGTGCGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCGCTGCTGGTCAGGGGG 280303 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTC---GCTCGATT 42156 | || |||||| | | ||| |||| || || | | | | ||| || ||| || Sbjct 280302 AATGCCCTCCTTAT-CTTGAATTTTCGTCTTCACATTGTCGATCGTATCAGAGCT---TT 280247 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | |||||||| || ||||| || ||||| || ||||| ||||| Sbjct 280246 CGACCTCAAGAGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 280195 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || || | || ||| | ||||| || ||| ||||| || ||||| || || Sbjct 280877 CCTCCCCTCAACCTCAGCACAAGATGCAGAGTCGACTCTTTTTGGATGTTGTAGTCCGCG 280818 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || | |||||| || || || || | | |||||| || | || Sbjct 280817 AGGGTACGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGCTGATCTGGAGGG 280758 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTC---GCTCGATTC 42157 | | |||||||||| ||| |||| |||| || | || ||||| ||| ||| Sbjct 280757 ATTCCCTCCTTGTCC-TGAATTTTGGTTTTCACGATGTCAATTGTGTCAGAGCT---TTC 280702 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | |||||||||||| ||||| |||||||| || ||||| ||||| Sbjct 280701 GACCTCCAACGTGATGGTTTTCCCCGTGAGCGTCTTCACGAAGATCTGCAT 280651 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | | ||| |||||||| | || |||||||||||| ||||| || ||| Sbjct 282017 CCTCCCCTCAGCCTCAAGACCAAATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCC 281958 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || || |||| || || ||||| || || || || | | |||||| || | || Sbjct 281957 AAGGTACGACCGTCCTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGG 281898 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 42157 | || ||||||||| ||| | || |||| ||| | | | |||||| |||| || Sbjct 281897 ATGCCTTCCTTGTCC-TGAATCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTC---TC 281842 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || | |||||||| || || || | ||||| ||||| || ||||| Sbjct 281841 CACCTCAAGAGTGATGGTCTTACCGGTCAATGTCTTCACAAAAATCTGCAT 281791 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| | | || ||||||||||| || |||||||| || |||||||| || Sbjct 281562 ACCTCCTCTCAGCCTCAGGACCAAATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGGC 281503 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||||| | || || ||||| || || || || || | || ||||||||| | || Sbjct 281502 GAGTGTCCGACCATCTTCAAGCTGTTTCCCGGCAAAAATCAATCTCTGCTGGTCTGGAGG 281443 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTT 42130 | | |||||||| | ||| |||| |||| Sbjct 281442 AATTCCCTCCTTGT-CTTGAATTTTGGTTT 281414 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | | ||| |||||||| | || |||||||| || ||||| || || Sbjct 281790 ACCACCTCTCAGCCTCAAAACCAAATGGAGGGTAGATTCCTTTTGGATGTTGTAGTCGGC 281731 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | | || || || ||||| || || || || | | |||||| || | || Sbjct 281730 CAACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGG 281671 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCAC-CGTGTC---GCTCGATT 42156 | || ||||||||| ||| | || |||| ||| || |||||| |||| | Sbjct 281670 GATGCCTTCCTTGTCC-TGAATCTTCGTTTTCACGTTATCAATCGTGTCAGAGCTC---T 281615 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || | || ||||| ||||| || || || || || ||||||||||| Sbjct 281614 CCACCTCAAGAGTTATGGTCTTGCCGGTGAGGGTTTTAACGAAGATTTGCAT 281563 >seq3072 Length=975934 Score = 93.3 bits (102), Expect = 5e-14 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | | |||||||||||| | || || ||||| || ||||| || || Sbjct 271582 ACCACCTCTCAGCCTCAACACCAAATGGAGGGTAGATTCGTTTTGGATGTTGTAGTCGGC 271523 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||| | | || || || ||||| || || || || | | |||||| || | || Sbjct 271522 CAACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGG 271463 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | || ||||||||| ||| | || |||| ||| | | | |||||| |||| | Sbjct 271462 GATGCCTTCCTTGTCC-TGAATCTTCGTTTTCACGTTGTCAATCGTGTCAGAGCTC---T 271407 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || | || ||||| |||||||| || | || || ||||||||||| Sbjct 271406 CCACCTCAAGAGTTATGGTCTTGCCCGTGAGGGCTTTAACGAAGATTTGCAT 271355 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || || | |||||||| || | ||| ||| ||||| || ||||| || || Sbjct 271130 ACCTCCCCTCAATCTCAACACCAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAGTCGGC 271071 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || |||| || | |||||||||||| || || | ||||||||| || | ||| Sbjct 271070 TAGCGTGCGGCCGTCCTCCAACTGCTTACCAGCAAAAATCAATCGCTGCTGATCTGGTGG 271011 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTT 42130 | | |||||||| | || |||| |||| Sbjct 271010 AATTCCCTCCTTGT-CTTGTATTTTGGTTT 270982 >seq824 Length=416372 Score = 82.4 bits (90), Expect = 8e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| |||| || |||||| || || ||||| || || || || || | || || Sbjct 212153 CACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCTTC 212094 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||||| |||||||| || | |||||||||||| | || | | |||||||||| Sbjct 212093 AAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTG 212034 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 ||| || || | | | | ||||| || ||||| |||| ||||| || || Sbjct 212033 GATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTT 211974 Query 42179 GCCCGTTA 42186 |||||||| Sbjct 211973 GCCCGTTA 211966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543184709108080