Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4017 114 1e-20 seq2625 113 4e-20 seq487 104 2e-17 seq3072 93.3 4e-14 seq4073 91.5 1e-13 seq308 86.0 6e-12 >seq4017 Length=874442 Score = 114 bits (126), Expect = 1e-20 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| ||||| || | ||| | | ||||||||||| ||||| |||||| | Sbjct 473341 CCACCTCTCAACCGCAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTATAGTCGGCC 473282 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || ||||| ||||| || | |||| | ||||| ||||| || || Sbjct 473281 AAAGTCCTGCCA-TCTTCGAGCTGTTTCCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 473223 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || ||||| ||||| ||| |||| || || | |||| | | |||||||| |||| Sbjct 473222 AATGCCTTCCTTGTCT-TGAATTTTGGTCTTCACATTGT-CGATGGTGTCGGAACTCTCC 473165 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || || || |||||||| || || ||||||||||| Sbjct 473164 ACCTCCAAGGTGATGGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 473115 Score = 102 bits (112), Expect = 8e-17 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | || ||| | || | | | ||||||||||| |||||||| || | Sbjct 472429 CCTCCTCTCAGTCTCAGAACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCC 472370 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||||| || || || |||| | |||| |||||||| ||||| || || Sbjct 472369 AGCGTCCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGA 472310 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGT-TTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || || || ||| |||| || |||| ||||| | | |||||| | ||||| Sbjct 472309 ATACCCTCCTTATCT-TGAATTTTAGTCTTTACATTGT-CGATGGTGTCAGAGCTCTCCA 472252 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || ||||| |||| ||| || || || |||||||| Sbjct 472251 CCTCGAGGGTAATTGTCTTACCCGTCAAAGTCTTGACGAAGATCTGCAT 472203 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | || || | ||| | | | ||||||||||| |||||||||||| Sbjct 472885 CCTCCTCTCAGCCTCAGTACGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCA 472826 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | | |||||| || || || || | ||||||| ||||| ||||| ||||| Sbjct 472825 AGGGTCCTCCCGTCCTCAAGCTGCTTGCCTGCGAAGATTAGTCGCTGCTGGTCTGGAGGG 472766 Query 138508 ATACCTTCTTTGTCGGTGATTTT-TTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| |||||| | || |||| || | |||||||| |||||| Sbjct 472765 ATACCCTCCTTGTCTTGGATTTTGGTCTTCACATTG-TCGATGGTGTCGGAACTCTCCAC 472707 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || ||||||| || || || || |||||||| Sbjct 472706 CTCCAAGGTGATGGTCTTGCCAGTCAATGTCTTCACGAAGATCTGCAT 472659 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || | || | | | |||||||||||||||||||||||| | Sbjct 472657 CCACCTCTCAACCTCAACACGAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCC 472598 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | |||||| || |||||||| | |||| | |||||| ||||| || || Sbjct 472597 AGAGTTCTACCGTCCTCAAGCTGTTTACCTGCGAAGATCAAACGCTGCTGGTCTGGGGGA 472538 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || || || ||| || || | | || | |||||||| ||| ||| Sbjct 472537 ATACCCTCCTTATCTTGGATCTTAGTCTTCACATTATCGATGGTGTCGGAACTCTCAACC 472478 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || || |||| || || || || || ||||| Sbjct 472477 TCGAGAGTAATGGTCTTTCCTGTCAACGTCTTGACGAAGATTTGCAT 472431 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | ||| || | || | ||| | | | || ||||||||||| || ||||| | Sbjct 473569 CCTCCCCTCAATCGTAGCACAAGATGCAAGGTAGATTCCTTTTGAATATTATAGTCTGCC 473510 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||||| || ||||||| | |||| | ||||| ||||| ||||| Sbjct 473509 AAGGTACGACCATCCTCGAGCTGCTTACCGGCAAAGATCAATCGCTGCTGGTCGGGAGGA 473450 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || || || || | ||||| || | ||| || | ||| || | || | Sbjct 473449 ATACCCTCCTTATC-CTGGATCTTTGTCTTCACGTTG-TCGATGGTATCTGAGCTTTCAA 473392 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | ||||| ||||||| || || ||||| |||||||| Sbjct 473391 CCTCCAAAGTGATGGTTTTTCCAGTCAATGTCTTGACAAAGATCTGCAT 473343 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | || || | || | | | ||||||||||| |||||||||||| | Sbjct 473113 CCACCTCTCAACCTCAGGACGAGGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGCC 473054 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || ||||| || || |||| |||| | ||||| || || ||||| Sbjct 473053 AGGGTCCTTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCTGGAGGA 472994 Query 138508 ATACCTTCTTTGTCGGTGATTTT-TTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || || || |||||| | || |||| || | ||||| | |||||| Sbjct 472993 ATACCCTCCTTATCTTGGATTTTAGTCTTCACATTG-TCGATAGTGTCAGAACTCTCCAC 472935 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || |||||||| || || ||||||||||| Sbjct 472934 CTCCAAGGTTATAGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCAT 472887 >seq2625 Length=346021 Score = 113 bits (124), Expect = 4e-20 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||| | | | |||||||||||||||||||||||| || ||||| ||| Sbjct 282003 CAAGACCAAATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCCAAGGTACGACCGTC 281944 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 ||| ||||| || || | | | || | | ||| || || ||||| || ||||| ||||| Sbjct 281943 CTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGGATGCCTTCCTTGTC 281884 Query 138522 GGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 ||| | || ||||| | ||| || | ||||| | ||||||||| | || | Sbjct 281883 -CTGAATCTTCGTTTTCACGTTG-TCAATCGTGTCAGAGCTCTCCACCTCAAGAGTGATG 281826 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| |||| || || |||||||||||||| Sbjct 281825 GTCTTACCGGTCAATGTCTTCACAAAAATCTGCAT 281791 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | || || ||||| | | | || |||||||| |||||||| ||| Sbjct 281561 CCTCCTCTCAGCCTCAGGACCAAATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGGCG 281502 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || ||||| |||| | | || | | ||| ||||| ||||| Sbjct 281501 AGTGTCCGACCATCTTCAAGCTGTTTCCCGGCAAAAATCAATCTCTGCTGGTCTGGAGGA 281442 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| |||| ||||| | |||| | | |||||||| ||| | Sbjct 281441 ATTCCCTCCTTGTCT-TGAATTTTGGTTTTCACATTGT-CAATGGTGTCGGAACTCTCAA 281384 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | ||| || ||||||| ||||| || ||||||||||| Sbjct 281383 CCTCCAAAGTAATCGTCTTGCCAGTCAAGGTTTTGACGAAAATCTGCAT 281335 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | ||| | || ||| | ||| | | ||||| || ||||||||||||||| Sbjct 280650 GCCTCCCCTCAATCTCAGAACAAGATGAAGCGTGGACTCTTTCTGAATGTTGTAGTCGGC 280591 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || |||||| |||||||| |||| |||| | | ||| || || || || Sbjct 280590 CAGCGTCCGGCCGTCCTCTAGTTGTTTGCCGGCGAAGATCAACCTCTGCTGATCTGGGGG 280531 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || || || ||| || || | ||||| | | |||||| | ||| | Sbjct 280530 GATTCCCTCCTTATCCTGGATCTTAGTCTTGACATTGT-CGATGGTGTCAGAACTCTCGA 280472 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | ||||| || ||||||||||| || ||||| ||||| Sbjct 280471 CCTCGAGGGTAATGGTTTTCCCCGTCAGAGTTTTAACGAAAATTTGCAT 280423 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | |||||| ||||| | | | || |||||||| |||||||||||| | Sbjct 281789 CCACCTCTCAGCCTCAAAACCAAATGGAGGGTAGATTCCTTTTGGATGTTGTAGTCGGCC 281730 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | | ||||| ||||| || |||| | | || | | ||| || || ||||| Sbjct 281729 AACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGGG 281670 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT-AATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| | || ||||| | | || | ||||| | |||||| Sbjct 281669 ATGCCTTCCTTGTC-CTGAATCTTCGTTTTCACGTTATCAATCGTGTCAGAGCTCTCCAC 281611 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || || ||||| || || || ||||| Sbjct 281610 CTCAAGAGTTATGGTCTTGCCGGTGAGGGTTTTAACGAAGATTTGCAT 281563 >seq487 Length=466406 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| |||||| | || ||||| | | ||||||||||| ||||||||||| Sbjct 182780 CCTCCTCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCG 182721 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || ||||| || ||||| | |||| || | ||| ||||| || || Sbjct 182720 AGAGTGCGGCCATCTTCGAGCTGCTTACCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 182661 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||||||| || | | ||||||||||||| |||||| Sbjct 182660 ATCCCTTCCTTGTCCTGGATTTTTGCCTTCACGTTGTCCACGGTGTCGGAGCTTTCCACC 182601 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||| || || || || || || || || || ||||| Sbjct 182600 TCGAGAGTGATCGTCTTTCCTGTGAGGGTCTTCACGAAGATTTGCAT 182554 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | ||| || | || ||||| | | ||||||||||| ||||||||||| Sbjct 176806 CCTCCCCTCAACCGAAGCACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCTGCA 176747 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||||||| || ||||||| | |||| || | ||| ||||| ||||| Sbjct 176746 AGAGTTCGGCCGTCCTCGAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGA 176687 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| |||| | ||| | | || | ||| |||| || || Sbjct 176686 ATTCCCTCCTTGTC-CTGAATTTTGGCTTTGACGTTATCAATGGTATCGGAGCTTTCTAC 176628 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| || || ||||| |||||||||||||| Sbjct 176627 TTCTAAAGTGATAGTCTTACCGGTGAGTGTTTTCACAAAAATCTGCAT 176580 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||||| |||||| || | ||| | | ||||| |||||||||||||| ||| | Sbjct 183559 CCTCCTCGCAGACGCAACACCAGATGCAACGTCGACTCTTTTTGAATGTTGTAATCGGCC 183500 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || || || || | |||| | ||||| ||||| ||||| Sbjct 183499 AGTGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCGGGAGGA 183440 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| |||||| ||| | |||| || | |||||| | |||||| Sbjct 183439 ATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTG-TCGATGGTGTCAGAGCTCTCCAC 183381 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| || |||||||| || || || || ||||| Sbjct 183380 TTCCAGAGTGATGGTTTTCCCCGTCAGAGTCTTGACGAAGATTTGCAT 183333 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| ||||||||||| | ||||| || ||||| || ||||| | Sbjct 182975 GACTCCTTTTGGATGTTGTAGTCTGCGAGGGTACGACCATCTTCGAGCTGCTTACCAGCG 182916 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | | || || || ||||| || || || ||||| ||| | || | ||||| Sbjct 182915 AAGATCAATCTTTGCTGATCAGGAGGAATGCCCTCCTTGTC-CTGAATCTTAGCTTTAAC 182857 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||||| |||||| || | || | |||||| || ||||| |||| Sbjct 182856 GTTG-TCGATAGTGTCGGAGCTCTCCACTTCCAGAGTGATCGTTTTGCCGGTCAGCGTTT 182798 Query 138599 TTACAAAAATCTGCAT 138614 |||| || |||||||| Sbjct 182797 TTACGAAGATCTGCAT 182782 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||| | || || ||| |||||||| || |||| Sbjct 176089 GATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGTCCGTCTTCGAGTTGCTTGCCGGCG 176030 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || | ||| ||||| ||||| || || || ||||| ||||| || | | Sbjct 176029 AAGATCAGCCTCTGCTGGTCAGGAGGAATTCCCTCCTTGTCCTGAATTTTAACCTTCACA 175970 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||| || | ||| ||||||| ||| | || || || |||||||| || Sbjct 175969 TTG-TCGATGGTATCACTGCTCTCGACCTCGAGCGTGATGGTCTTCCCCGTCAGAGTCTT 175911 Query 138600 TACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 175910 CACGAAGATCTGCATG 175895 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| ||||||||||| | ||| || ||| || | ||| || || | Sbjct 176317 GACTCCTTTTGGATGTTGTAGTCCGCGAGAGTTCGGCCGTCTTCCAATTGCTTGCCAGCG 176258 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || || | ||| ||||| || || || || || ||||| ||| | || | ||| | Sbjct 176257 AAAATCAGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCC-TGAATCTTAGCTTTCAC 176199 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| | | |||||||| ||||||||||| || | || || || |||||||| | Sbjct 176198 GTTGT-CGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCT 176140 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 176139 TGACGAAGATCTGCAT 176124 >seq3072 Length=975934 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||| | | | ||||||||||| ||||| ||| || || ||||| ||| Sbjct 271795 CAAGACCAAATGGAGGGTAGACTCCTTTTGGATGTTTTAGCCGGCCAAGGTACGACCGTC 271736 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 ||| ||||| || || | | |||| | |||| ||||| || || || || ||||| || Sbjct 271735 CTCAAGTTGCTTCCCAGCGAAAATTAAAAGCTGCTGGTCTGGTGGAATGCCCTCTTTATC 271676 Query 138522 GGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 ||| | || || || | ||| || | ||||||| ||| ||||| | || | Sbjct 271675 -TTGAATCTTGGTCTTCACGTTG-TCAATCGTGTCGGAGCTCTCAACCTCAAGAGTGATG 271618 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCA 138613 || ||||| |||| || || ||||||||||||| Sbjct 271617 GTCTTACCGGTCAATGTCTTCACAAAAATCTGCA 271584 Score = 82.4 bits (90), Expect = 8e-11 Identities = 160/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | ||| || ||||| | | | || || ||||| |||||||||||| | Sbjct 271581 CCACCTCTCAGCCTCAACACCAAATGGAGGGTAGATTCGTTTTGGATGTTGTAGTCGGCC 271522 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | | ||||| ||||| || |||| | | || | | ||| || || ||||| Sbjct 271521 AACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGGG 271462 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || ||||| | ||| || | ||||| | ||||| Sbjct 271461 ATGCCTTCCTTGTC-CTGAATCTTCGTTTTCACGTTG-TCAATCGTGTCAGAGCTCTCCA 271404 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 |||| | || | || || || || || | ||| || || || |||||| || Sbjct 271403 CCTCAAGAGTTATGGTCTTGCCCGTGAGGGCTTTAACGAAGATTTGCATGCCT 271351 >seq4073 Length=488838 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 |||||| ||||| | | || |||||||| |||||||| || || ||| || || Sbjct 173471 CAAAACCAAATGAAGCGTCGATTCCTTTTGGATGTTGTAATCCGCCAGAGTGCGACCATC 173530 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 |||||| || || |||| | |||| || | ||| ||||| ||||| || || || ||||| Sbjct 173531 CTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATCCCCTCCTTGTC 173590 Query 138522 GGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||||| || | ||||| | | ||||| | ||| ||||| | ||| | | Sbjct 173591 CTGAATTTTGACCTTCACATTGT-CGATCGTGTCAGAGCTCTCGACCTCCAACGTGATGG 173649 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || ||||||| || || || ||||||||||| Sbjct 173650 TCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 173683 >seq308 Length=410546 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/140 (74%), Gaps = 10/140 (7%) Strand=Plus/Minus Query 57307 ACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTG----TTCG-C 57361 |||||||||| ||| || |||| ||||| | | | |||||||||||| ||| | Sbjct 381332 ACGTTGCCCAGGTCTCCAGCGTGGCGCACCTCATCCTCGGGAGCGCCGTGGGTCTTCTTC 381273 Query 57362 TGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAACT 57421 ||| || || |||||| |||| |||| |||| || ||| ||||||||||||||| Sbjct 381272 TGC-----GGATTGAAGTGCGGCCCCGTCGACATGCACCCATTGGTGGTGTCGCCGAACT 381218 Query 57422 CGTGAACGTGAAATCCGTGC 57441 |||| | || ||||||||| Sbjct 381217 CGTGCAAATGGAATCCGTGC 381198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496236737030640