Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq4017 141 7e-29 seq2625 122 6e-23 seq487 113 3e-20 seq4073 91.5 1e-13 >seq4017 Length=874442 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | || || | |||||| ||||| || ||||| ||||| || ||| Sbjct 473341 CCACCTCTCAACCGCAACACAAGATGAAGAGTAGACTCCTTTTGGATGTTATAGTCGGCC 473282 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | || | ||||| | ||||| |||||| | ||||| ||||| ||||| ||| Sbjct 473281 AAAGTCCTGCCATCTTCGAGCTGTTTCCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 473222 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||||||| | || ||| | || || || ||| | | || || Sbjct 473221 ATGCCTTCCTTGTCTTGAATTTTGGTCTTCACATTGTCGATGGTGTCGGAACTCTCCACC 473162 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || ||||| ||||| || ||||||||||| || || ||||| |||||| Sbjct 473161 TCCAAGGTGATGGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCATA 473114 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| || || || | || |||||||| || ||||| |||||||| ||| Sbjct 472657 CCACCTCTCAACCTCAACACGAGGTGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGCC 472598 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| |||| || | ||||| || ||| | ||||||||||| ||||| ||| Sbjct 472597 AGAGTTCTACCGTCCTCAAGCTGTTTACCTGCGAAGATCAAACGCTGCTGGTCTGGGGGA 472538 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || ||||| || || || | || ||| | || || || ||| | | || || Sbjct 472537 ATACCCTCCTTATCTTGGATCTTAGTCTTCACATTATCGATGGTGTCGGAACTCTCAACC 472478 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | |||||||| || ||||||| || || || || ||||||||| Sbjct 472477 TCGAGAGTAATGGTCTTTCCTGTCAACGTCTTGACGAAGATTTGCATA 472430 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| || | || | ||||||||||| || ||||| |||||||| ||| Sbjct 473113 CCACCTCTCAACCTCAGGACGAGGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGGCC 473054 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || | ||||| | || ||||| ||| | ||||| ||||| || || ||| Sbjct 473053 AGGGTCCTTCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCTGGAGGA 472994 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || ||||| || ||||| | || ||| | || ||||| || | | || || Sbjct 472993 ATACCCTCCTTATCTTGGATTTTAGTCTTCACATTGTCGATAGTGTCAGAACTCTCCACC 472934 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || ||||| || || || ||||||||||| || || ||||| |||||| Sbjct 472933 TCCAAGGTTATAGTCTTGCCTGTCAGAGTCTTCACGAAAATCTGCATA 472886 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || ||| | ||| | |||||||| || || ||||| ||||||||||| Sbjct 472429 CCTCCTCTCAGTCTCAGAACCAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCC 472370 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || | || || | || ||||| || | |||| |||||| ||||| ||| Sbjct 472369 AGCGTCCTTCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGA 472310 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || ||||| || |||||| | |||||| | || || || || | || || Sbjct 472309 ATACCCTCCTTATCTTGAATTTTAGTCTTTACATTGTCGATGGTGTCAGAGCTCTCCACC 472250 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | |||||| || ||||| |||| ||| || || || || |||||| Sbjct 472249 TCGAGGGTAATTGTCTTACCCGTCAAAGTCTTGACGAAGATCTGCATA 472202 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||||| || | ||| | ||| || || || |||||||| || |||||||| Sbjct 473797 CCACCTCGCAGCCTCAGAACAAGATGCAGAGTTGATTCTTTTTGGATATTGTAATCCGCC 473738 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || ||| | ||||| | || || || || | ||||| | ||| || ||| ||| Sbjct 473737 AGGGTTCGTCCATCTTCCAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGATCGGGAGGA 473678 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| || ||| |||| ||| | || || || || |||| || Sbjct 473677 ATTCCTTCCTTGTCCTGGATCTTGGTTTTGACATTGTCGATGGTGTCAGAGCTTTCGACC 473618 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || || || || |||| || || || || || |||||| Sbjct 473617 TCGAGAGTGATAGTCTTCCCGGTCAAGGTCTTCACGAAGATCTGCATA 473570 >seq2625 Length=346021 Score = 122 bits (134), Expect = 6e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||| || | |||||| | ||| | |||||| || || ||||| || |||||||| ||| Sbjct 280651 TGCCTCCCCTCAATCTCAGAACAAGATGAAGCGTGGACTCTTTCTGAATGTTGTAGTCGG 280592 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || | | |||| |||| ||||||||| ||| | ||||| | ||| || || | Sbjct 280591 CCAGCGTCCGGCCGTCCTCTAGTTGTTTGCCGGCGAAGATCAACCTCTGCTGATCTGGGG 280532 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | ||||| ||||| || || || | || ||| | || || || || | | || | Sbjct 280531 GGATTCCCTCCTTATCCTGGATCTTAGTCTTGACATTGTCGATGGTGTCAGAACTCTCGA 280472 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || | |||||||||||| || ||||||||||| || |||||||||||| Sbjct 280471 CCTCGAGGGTAATGGTTTTCCCCGTCAGAGTTTTAACGAAAATTTGCATA 280422 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || || | || ||||| | |||||| || ||||| |||||||||||| | Sbjct 281561 CCTCCTCTCAGCCTCAGGACCAAATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGGCG 281502 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | ||||| || || | ||||| | ||| ||||| ||| Sbjct 281501 AGTGTCCGACCATCTTCAAGCTGTTTCCCGGCAAAAATCAATCTCTGCTGGTCTGGAGGA 281442 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| |||||||| ||||||| |||| ||| | || || || ||| | | || || Sbjct 281441 ATTCCCTCCTTGTCTTGAATTTTGGTTTTCACATTGTCAATGGTGTCGGAACTCTCAACC 281382 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || || || |||| ||||| || ||||| |||||| Sbjct 281381 TCCAAAGTAATCGTCTTGCCAGTCAAGGTTTTGACGAAAATCTGCATA 281334 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || || | |||||| || || | ||| || || || || ||||| |||||||| || Sbjct 281333 CCTCCCCTCAATCTCAACACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCC 281274 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || ||| |||| || || || || || || | ||||| ||||| || || |||| Sbjct 281273 AGCGTTCGGCCGTCCTCCAACTGCTTACCGGCAAAAATCAACCGCTGCTGATCTGGTGGA 281214 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || || || | || || | || ||||||||| |||| || Sbjct 281213 ATTCCTTCCTTATCTTGGATCTTAGTCTTCACGTTGTCGATAGTATCGGAGCTTTCAACC 281154 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| || || || ||||| ||||| || || ||||| |||||| Sbjct 281153 TCCAGGGTGATAGTCTTCCCTGTAAGAGTCTTGACGAAAATCTGCATA 281106 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || || |||| ||| | ||| ||||| || || || || || || ||||| ||| Sbjct 280193 CCTCCACGCAGTCTCAGAACCAAATGCAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCC 280134 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | | || || | ||| ||||| ||| | ||||| ||||| ||||| || Sbjct 280133 AAACTGCGACCATCCTCGAGTTGCTTGCCGGCGAAAATCAACCGCTGCTGGTCAGGGGGG 280074 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| |||||||| || || | || || |||||| | | || || Sbjct 280073 ATGCCCTCCTTGTCCTGGATTTTGCTCTTGACGTTGTCGATGGTATCGGAACTCTCGACC 280014 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || || || || || ||||||||||| || || || || ||||| || Sbjct 280013 TCCAAAGTGATCGTCTTCCCTGTCAGAGTCTTCACGAAGATCTGCATCTT 279964 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || || ||||| ||||| |||||||| || ||||| |||||||| ||| Sbjct 281789 CCACCTCTCAGCCTCAAAACCAAATGGAGGGTAGATTCCTTTTGGATGTTGTAGTCGGCC 281730 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | ||| | || || | ||| || || || | ||||| | ||| || || || Sbjct 281729 AACGTCCTCCCATCCTCAAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGAGGG 281670 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||| || |||| || | || || || || | || || Sbjct 281669 ATGCCTTCCTTGTCCTGAATCTTCGTTTTCACGTTATCAATCGTGTCAGAGCTCTCCACC 281610 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || ||||| || || || || ||||| || || ||||||||| Sbjct 281609 TCAAGAGTTATGGTCTTGCCGGTGAGGGTTTTAACGAAGATTTGCATA 281562 >seq487 Length=466406 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||||| | || || | ||| | || || |||||||| |||||||||||| Sbjct 183559 CCTCCTCGCAGACGCAACACCAGATGCAACGTCGACTCTTTTTGAATGTTGTAATCGGCC 183500 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | || ||||||||| | ||||| ||||| |||||| ||| Sbjct 183499 AGTGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCGGGAGGA 183440 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| |||||||| |||||| ||| ||| | || || || || | || || Sbjct 183439 ATTCCCTCCTTGTCCTGGATTTTGGCTTTCACATTGTCGATGGTGTCAGAGCTCTCCACT 183380 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || |||||||| || |||||||| || || || |||||||| Sbjct 183379 TCCAGAGTGATGGTTTTCCCCGTCAGAGTCTTGACGAAGATTTGCAT 183333 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| || ||||| || || || |||||||| || ||| | | | ||||| Sbjct 177700 ACCAAATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCGAGGGTGCGGCCATCTTCG 177641 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||||||| | |||| | ||| ||||| ||||||||||||||||| | Sbjct 177640 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGA 177581 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| || ||| | || || ||||| ||||||| || | || ||||| || Sbjct 177580 ATCTTGGCCTTCACATTATCGATCGTATCCGAGCTTTCTACCTCCAGAGTGATGGTCTTG 177521 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||||||| || || || ||||||||| Sbjct 177520 CCGGTCAGAGTCTTGACGAAGATTTGCATA 177491 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| || || || || || || |||||||| || |||| ||| | ||||| Sbjct 177472 ACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTTCGGCCATCTTCG 177413 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || |||||| | |||| | ||| ||||| ||||| ||||||||||| | Sbjct 177412 AGCTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTCCTGA 177353 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| ||| | || || ||||| ||||||| || | || || || || Sbjct 177352 ATCTTAGCTTTCACATTATCGATCGTATCCGAGCTTTCTACCTCAAGAGTGATCGTCTTT 177293 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| |||||| || || ||||||||| Sbjct 177292 CCAGTCAAAGTTTTGACGAAGATTTGCATA 177263 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || |||||||| || || || || ||||||||||| || | | ||||||| Sbjct 182306 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGGCCGTCTTCG 182247 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || ||||| | ||||| | ||| ||||| || ||||| ||||| || | Sbjct 182246 AGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATTCCCTCCTTATCCTGA 182187 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| || ||| | || || |||||||| | || || || | || ||||| || Sbjct 182186 ATCTTGGCCTTCACATTGTCGATGGTATCGCTGCTCTCGACCTCGAGCGTGATGGTCTTT 182127 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || ||||| || || ||||| || ||||| || Sbjct 182126 CCCGTCAGCGTCTTCACAAAGATCTGCATGTT 182095 Score = 87.8 bits (96), Expect = 1e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||| | || ||||||||| | |||| | ||| ||||| |||||||||||||||| Sbjct 183164 TCTTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGAATTCCTTCCTTG 183105 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || ||| ||| || ||| | || || || || |||| || || | || ||| Sbjct 183104 TCCTGAATCTTGGCCTTCACATTATCGATCGTGTCCGAGCTTTCCACCTCCAGAGTGATG 183045 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||||||||| || || ||||||||| Sbjct 183044 GTCTTTCCGGTCAGAGTTTTGACGAAGATTTGCATA 183009 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| || || || || ||||| ||||| || || |||| ||| | ||||| Sbjct 177244 ACCAAATGGAGAGTGGACTCCTTTTGGATGTTATAGTCCGCGAGAGTTCGGCCATCTTCG 177185 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || ||||| ||| | |||| | ||| ||||| ||||||||||| ||||| | Sbjct 177184 AGCTGCTTGCCGGCGAAGATCAGTCTCTGCTGGTCTGGGGGAATTCCTTCTTTGTCTTGA 177125 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| | || || || ||| |||| || || | ||||| || ||| Sbjct 177124 ATCTTAGCCTTGACATTATCGATGGTGTCGGAGCTTTCCACCTCCAGAGTAATTGTCTTA 177065 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || || || || |||||| Sbjct 177064 CCCGTGAGGGTCTTCACGAAGATCTGCATA 177035 >seq4073 Length=488838 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| ||||| || ||||| || ||||| ||||| ||| ||| | | ||||| | ||| Sbjct 172796 ATGCAGGGTGGACTCTTTCTGAATGTTATAATCTGCAAGAGTTCGCCCATCTTCGAGTTG 172855 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || || ||| | ||||| | ||| || ||| ||||| ||||||||||| ||| || Sbjct 172856 CTTACCGGCGAAGATCAACCTCTGCTGATCGGGAGGAATACCTTCCTTGTCCTGAATCTT 172915 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 ||| || | || || || || | || || || | || ||||| || || || Sbjct 172916 CGCTTTGACGTTGTCGATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTCTTGCCGGT 172975 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 ||| ||||| || || ||||||||| Sbjct 172976 CAGTGTTTTCACGAAGATTTGCATA 173000 Score = 86.0 bits (94), Expect = 4e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| ||||| || ||||| || ||||| ||||| ||| ||| | | ||||| | || Sbjct 173024 ATGCAGGGTGGACTCTTTCTGAATGTTATAATCTGCCAGAGTTCGCCCATCTTCGAGCTG 173083 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || || ||| | ||||| | ||| |||||| ||||| ||||||||||| ||| || Sbjct 173084 CTTACCGGCGAAGATCAACCTCTGCTGGTCGGGAGGAATACCTTCCTTGTCCTGAATCTT 173143 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 ||| || | || || || || | || || || | || ||||| || || || Sbjct 173144 CGCTTTGACGTTGTCGATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTCTTGCCGGT 173203 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 || ||||| || || ||||||||| Sbjct 173204 CAATGTTTTCACGAAGATTTGCATA 173228 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 14962 CTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG 15021 || ||||| |||||||| || || || ||||| ||||||||||| ||| | | | Sbjct 173469 CTCAAAACCAAATGAAGCGTCGATTCCTTTTGGATGTTGTAATCCGCCAGAGTGCGACCA 173528 Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 || || | || ||||| || | |||| | ||| ||||| ||||| || |||||| Sbjct 173529 TCCTCGAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATCCCCTCCTTG 173588 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || ||||||| || ||| | || || || || | || || || || || ||| Sbjct 173589 TCCTGAATTTTGACCTTCACATTGTCGATCGTGTCAGAGCTCTCGACCTCCAACGTGATG 173648 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || |||| || || || ||||| ||||| Sbjct 173649 GTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 173683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357373980407045