Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_013648.1 Length=39576 Score E Sequences producing significant alignments: (Bits) Value seq347 80.6 7e-11 >seq347 Length=279782 Score = 80.6 bits (88), Expect = 7e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 38658 TCGGGACCATTAGCTCAGTTGGTTAGAGCCAACCGCTCATAACGGTTAGGTCATAGGTTC 38717 ||||| ||||||||||||||||||||||| ||| |||||| |||||| |||||| Sbjct 72276 TCGGGCCCATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCACAGGTTC 72217 Query 38718 GAGTCCTGTATGGTCCA 38734 ||| ||||||||| ||| Sbjct 72216 GAGACCTGTATGGGCCA 72200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126515384389172